SRR2936555.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936555.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	106199
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG	578	0.544261245397791	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC	479	0.45104002862550496	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC	373	0.35122741268750174	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	186	0.17514289211762823	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG	160	0.15066055235925008	No Hit
GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	136	0.12806146950536257	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCT	121	0.11393704272168288	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC	118	0.11111215736494694	No Hit
GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	109	0.10263750129473911	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGGAT	35	1.198041E-7	45.0	5
ACACGCG	20	7.004357E-4	45.0	36
CTATCTC	25	3.866846E-5	45.0	5
ATGGATA	20	7.004357E-4	45.0	39
GGGTAGT	20	7.004357E-4	45.0	7
TCGGGTG	20	7.004357E-4	45.0	5
TGAAACG	25	3.866846E-5	45.0	4
AAACGGC	25	3.866846E-5	45.0	6
AGCGGGC	25	3.866846E-5	45.0	4
CTACGGG	20	7.004357E-4	45.0	3
GAAACGG	25	3.866846E-5	45.0	5
TAGGGTA	20	7.004357E-4	45.0	5
GCGATTG	25	3.866846E-5	45.0	9
TGGATAT	20	7.004357E-4	45.0	40
TGGGCGA	25	3.866846E-5	45.0	6
ATCGGGG	20	7.004357E-4	45.0	3
AGCTAGG	20	7.004357E-4	45.0	2
GCTAAAC	20	7.004357E-4	45.0	44
GTTATCT	35	1.198041E-7	45.0	25
TCTATCT	20	7.004357E-4	45.0	4