##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936553.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 210139 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06542812138632 33.0 31.0 34.0 30.0 34.0 2 32.19134953530758 33.0 31.0 34.0 30.0 34.0 3 32.06986803972609 33.0 31.0 34.0 30.0 34.0 4 35.81783486168679 37.0 35.0 37.0 35.0 37.0 5 35.87932273399988 37.0 35.0 37.0 35.0 37.0 6 35.84525004877724 37.0 35.0 37.0 35.0 37.0 7 26.705423552981596 36.0 10.0 37.0 0.0 37.0 8 31.112011573291962 36.0 19.0 37.0 17.0 37.0 9 35.99453694935257 39.0 32.0 39.0 32.0 39.0 10 36.743246137080696 38.0 35.0 39.0 33.0 39.0 11 37.052308234073635 39.0 37.0 39.0 34.0 39.0 12 37.04905324570879 39.0 37.0 39.0 34.0 39.0 13 36.963343310856146 39.0 37.0 39.0 33.0 39.0 14 38.041772350682166 40.0 37.0 41.0 33.0 41.0 15 38.181341873712164 40.0 37.0 41.0 33.0 41.0 16 38.165685570027456 40.0 37.0 41.0 33.0 41.0 17 38.10225136695235 40.0 37.0 41.0 33.0 41.0 18 37.995564840415156 40.0 37.0 41.0 33.0 41.0 19 37.8817116289694 40.0 37.0 41.0 33.0 41.0 20 37.9177163686893 40.0 36.0 41.0 33.0 41.0 21 37.8513602900937 40.0 36.0 41.0 33.0 41.0 22 37.87557283512342 40.0 36.0 41.0 33.0 41.0 23 37.8367128424519 40.0 36.0 41.0 33.0 41.0 24 37.76467956923751 40.0 36.0 41.0 33.0 41.0 25 37.6739919767392 40.0 36.0 41.0 33.0 41.0 26 37.534246379777194 40.0 35.0 41.0 33.0 41.0 27 37.419441417347564 39.0 35.0 41.0 33.0 41.0 28 37.38094784880484 39.0 35.0 41.0 33.0 41.0 29 37.31483446671013 39.0 35.0 41.0 32.0 41.0 30 37.192215628702904 39.0 35.0 41.0 32.0 41.0 31 37.05783314853502 39.0 35.0 41.0 31.0 41.0 32 36.92529706527584 39.0 35.0 41.0 31.0 41.0 33 36.81723049981203 39.0 35.0 41.0 31.0 41.0 34 36.64789972351634 39.0 35.0 41.0 31.0 41.0 35 36.533860920628726 39.0 35.0 41.0 30.0 41.0 36 36.32570822170087 39.0 35.0 41.0 30.0 41.0 37 36.235515539714186 39.0 35.0 41.0 30.0 41.0 38 36.02937103536231 39.0 35.0 40.0 29.0 41.0 39 35.93621364906086 39.0 35.0 40.0 29.0 41.0 40 35.745401853059164 38.0 35.0 40.0 28.0 41.0 41 35.64818049005658 38.0 35.0 40.0 27.0 41.0 42 35.57767953592622 38.0 35.0 40.0 27.0 41.0 43 35.561994679712 38.0 35.0 40.0 27.0 41.0 44 35.36943166189998 38.0 34.0 40.0 26.0 41.0 45 35.25115280837922 38.0 34.0 40.0 26.0 41.0 46 35.17715416938312 38.0 34.0 40.0 26.0 41.0 47 35.01322933867583 38.0 34.0 40.0 25.0 41.0 48 34.92343639210237 38.0 34.0 40.0 25.0 41.0 49 34.79472634779836 37.0 34.0 40.0 24.0 41.0 50 34.56992752416258 37.0 34.0 40.0 24.0 41.0 51 32.51149953126264 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 18.0 10 16.0 11 16.0 12 8.0 13 8.0 14 12.0 15 16.0 16 27.0 17 69.0 18 115.0 19 185.0 20 307.0 21 454.0 22 700.0 23 1001.0 24 1336.0 25 1832.0 26 2441.0 27 2776.0 28 3101.0 29 3560.0 30 4357.0 31 5301.0 32 6860.0 33 9785.0 34 15291.0 35 17747.0 36 19767.0 37 31905.0 38 39363.0 39 41752.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.23775691328121 19.105925125750097 23.61627303832225 15.04004492264644 2 30.311365334373914 24.876867216461484 27.280514326231685 17.531253122932917 3 32.0368898681349 24.618942699832015 27.28479720565911 16.05937022637397 4 28.695768039250208 25.860025982801858 27.146793312997588 18.29741266495034 5 26.00231275489081 30.367518642422397 25.25566410804277 18.37450449464402 6 27.84633028614393 34.75604242905886 23.581058251918968 13.816569032878236 7 62.062729907347034 28.205140407063894 6.158304741147526 3.5738249444415366 8 85.11937336715222 4.875344414887288 6.833572064205122 3.1717101537553716 9 78.88968730221426 6.935885294971424 8.714707883829274 5.459719518985053 10 45.006400525366544 25.505022865817388 15.544948819590843 13.943627789225227 11 33.841409733557306 25.93949718995522 23.20606836427317 17.013024712214296 12 30.683499969068095 23.25127653600712 27.127282417828198 18.93794107709659 13 26.34827423752849 24.953007295171293 29.2791913923641 19.419527074936113 14 21.899790138908056 26.435359452552838 30.67493421021324 20.98991619832587 15 20.928528259866088 24.910654376388962 33.51638677256483 20.644430591180125 16 25.581162944527193 24.505208457259243 29.60516610434046 20.3084624938731 17 26.750864903706596 23.384045798257343 27.524162578103066 22.340926719932995 18 27.292887089022027 23.889425570693685 27.994327564136118 20.823359776148166 19 26.94740148187628 25.265657493373432 26.533389803891712 21.253551220858576 20 27.421373471844827 26.60381937669828 26.953111987779515 19.02169516367738 21 26.48960925863357 25.509305745244816 28.485906947306304 19.515178048815308 22 25.991367618576277 23.287443073394275 28.578226792741944 22.1429625152875 23 24.5309057338238 25.628274618228886 28.603448193814568 21.23737145413274 24 23.69241311703206 25.113377335953825 29.17545053512199 22.01875901189213 25 25.083873055453772 26.34351548260913 26.67853182893228 21.89407963300482 26 23.670998719894925 26.517210037165878 26.984043894755377 22.82774734818382 27 23.080913109893928 26.44582871337543 28.258914337652698 22.214343839077944 28 22.29191154426356 26.50245789691585 28.44307815303204 22.76255240578855 29 24.202075768895824 26.177434935923365 27.466581643578774 22.153907651602033 30 25.305155159204144 25.020581615026245 27.76971433194219 21.904548893827418 31 25.78007890015656 25.57783181608364 27.157262573820184 21.48482670993961 32 27.151552067916953 25.73439485293068 26.40014466614955 20.71390841300282 33 26.48056762428678 26.35350886793979 25.570693683704594 21.59522982406883 34 24.256325574976564 26.600964123746664 28.605351695782318 20.537358605494457 35 24.509967212178605 27.11538553052979 27.00688591836832 21.367761338923284 36 25.779603024664627 27.96720266109575 25.3570255878252 20.896168726414423 37 24.730773440437044 28.63152484783881 25.664441155616046 20.9732605561081 38 24.40051584903326 27.763052075055082 25.585445823954622 22.250986251957038 39 24.43239950699299 26.280224042181604 26.239298749875083 23.048077700950323 40 25.17095827047811 25.064362160284382 27.569370749837013 22.19530881940049 41 22.68022594568357 25.519775006067412 27.358082031417304 24.441917016831717 42 23.385473424733153 26.3325703462946 27.276707322296197 23.00524890667606 43 23.642922065870685 25.841942714108278 27.466581643578774 23.04855357644226 44 23.989359424000302 25.765802635398476 27.100633390279764 23.144204550321454 45 23.1408734218779 25.559272671898125 26.965960626061797 24.33389328016218 46 23.465896382870387 26.09463260032645 26.900765683666528 23.53870533313664 47 22.634541898457687 25.98565711267304 28.6129657036533 22.766835285215976 48 23.818520122395174 26.446780464359303 27.65217308543393 22.082526327811593 49 23.74000066622569 25.91284816240679 27.53891471835309 22.808236453014434 50 21.945950061625876 26.619047392440244 27.763052075055082 23.671950470878798 51 22.556498317780136 25.896668395680955 26.30544544325423 25.241387843284684 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 77.0 1 204.5 2 332.0 3 865.0 4 1398.0 5 985.0 6 572.0 7 510.0 8 448.0 9 459.0 10 470.0 11 465.5 12 461.0 13 485.5 14 510.0 15 507.5 16 505.0 17 497.5 18 490.0 19 493.0 20 496.0 21 589.0 22 682.0 23 823.5 24 965.0 25 1109.5 26 1587.0 27 1920.0 28 2294.0 29 2668.0 30 2919.5 31 3171.0 32 3763.5 33 4356.0 34 5148.0 35 5940.0 36 6440.0 37 6940.0 38 7558.0 39 8176.0 40 8934.5 41 9693.0 42 10448.5 43 11204.0 44 12092.0 45 12980.0 46 14343.0 47 15706.0 48 15602.0 49 15498.0 50 15516.0 51 15534.0 52 15099.5 53 14665.0 54 13791.0 55 12917.0 56 12434.0 57 11951.0 58 11493.5 59 11036.0 60 10510.0 61 9984.0 62 8924.0 63 7864.0 64 6843.5 65 5823.0 66 5151.0 67 4479.0 68 3825.0 69 3171.0 70 2603.5 71 2036.0 72 1775.5 73 1515.0 74 1247.0 75 782.0 76 585.0 77 441.5 78 298.0 79 231.5 80 165.0 81 134.5 82 104.0 83 75.5 84 47.0 85 42.5 86 38.0 87 27.0 88 16.0 89 16.0 90 16.0 91 9.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 210139.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.14926786555566 #Duplication Level Percentage of deduplicated Percentage of total 1 66.41467919538954 31.314034995883677 2 11.41816126525298 10.767158880550493 3 6.628044287891481 9.375223066636845 4 4.346026907821032 8.196479473110656 5 3.146983720061769 7.418898919286758 6 2.2567849897556496 6.384345599817263 7 1.6592819871012021 5.476375161202823 8 1.195006005308895 4.507492659620537 9 0.9204775986838785 3.905986037813067 >10 1.9963867217069207 11.401025035809631 >50 0.012111547351103666 0.400687164210356 >100 0.0050464780629598605 0.5272700450654091 >500 0.001009295612591972 0.3250229609924859 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 683 0.3250229609924859 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCGTCTTC 300 0.14276264758088691 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGCCG 284 0.13514863970990632 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAGATCATCGTATGC 268 0.12753463183892566 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.041877043290393504 0.0 2 0.0 0.0 0.0 0.2241373567019925 0.0 3 0.0 0.0 0.0 0.29884980893599 0.0 4 0.0 0.0 0.0 0.39402490732324796 0.0 5 0.0 0.0 0.0 0.8275474804772079 0.0 6 0.0 0.0 0.0 1.1125969001470455 0.0 7 0.0 0.0 0.0 1.3586245294781074 0.0 8 0.0 0.0 0.0 1.8221272586240536 0.0 9 0.0 0.0 0.0 2.081955277221268 0.0 10 0.0 0.0 0.0 2.7267665687949405 0.0 11 0.0 0.0 0.0 3.285920271820081 0.0 12 0.0 0.0 0.0 3.8798128857565706 0.0 13 0.0 0.0 0.0 4.091101604176283 0.0 14 0.0 0.0 0.0 4.195318336910331 0.0 15 0.0 0.0 0.0 4.370440517942885 0.0 16 0.0 0.0 0.0 4.638834295394953 0.0 17 0.0 0.0 0.0 4.957670874992267 0.0 18 0.0 0.0 0.0 5.276983330081517 0.0 19 0.0 0.0 0.0 5.473519908251205 0.0 20 0.0 0.0 0.0 5.710505903235478 0.0 21 0.0 0.0 0.0 5.991748318969825 0.0 22 0.0 0.0 0.0 6.273942485688044 0.0 23 0.0 0.0 0.0 6.551853772978838 0.0 24 0.0 0.0 0.0 6.7774187561566395 0.0 25 0.0 0.0 0.0 6.984900470640862 0.0 26 0.0 0.0 0.0 7.183340550778294 0.0 27 0.0 0.0 0.0 7.456968958641661 0.0 28 0.0 0.0 0.0 7.663974797633947 0.0 29 0.0 0.0 0.0 7.90476779655371 0.0 30 0.0 0.0 0.0 8.1983829750784 0.0 31 0.0 0.0 0.0 8.405388814070687 0.0 32 0.0 0.0 0.0 8.642374809054958 0.0 33 0.0 0.0 0.0 8.868891543216632 0.0 34 0.0 0.0 0.0 9.104449911725096 0.0 35 0.0 0.0 0.0 9.399968592217531 0.0 36 0.0 0.0 0.0 9.669789996145408 0.0 37 0.0 0.0 0.0 9.93009389023456 0.0 38 0.0 0.0 0.0 10.232274827614104 0.0 39 0.0 0.0 0.0 10.71243319897782 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGG 20 7.020117E-4 45.0 2 GAATCTA 20 7.020117E-4 45.0 1 TATGCGG 25 3.8798928E-5 45.0 2 CCGCTAT 20 7.020117E-4 45.0 12 CGCTATA 20 7.020117E-4 45.0 13 TAGGGTC 20 7.020117E-4 45.0 5 CGAATGA 20 7.020117E-4 45.0 45 CGTAAGG 45 3.8198777E-10 45.0 3 ACGTAAG 20 7.020117E-4 45.0 2 GGCGATT 90 0.0 40.0 8 CATGCGG 40 3.4402728E-7 39.375 2 GACACGA 40 3.4402728E-7 39.375 25 CGACCAA 40 3.4402728E-7 39.375 29 AGACACG 40 3.4402728E-7 39.375 24 ACGACCA 40 3.4402728E-7 39.375 28 ACGTGAG 35 6.2239487E-6 38.571426 44 TATACTG 30 1.1367491E-4 37.500004 18 GCGATTG 55 2.7266651E-9 36.81818 9 GCGATGT 55 2.7266651E-9 36.81818 9 ACACGAC 50 4.8465154E-8 36.0 26 >>END_MODULE