##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936552.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 410179 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.836861467798204 31.0 31.0 34.0 30.0 34.0 2 31.931717615967663 33.0 31.0 34.0 30.0 34.0 3 31.54909685771334 33.0 31.0 34.0 28.0 34.0 4 35.468522279297574 37.0 35.0 37.0 33.0 37.0 5 35.65005278183427 37.0 35.0 37.0 33.0 37.0 6 35.628671872523945 37.0 35.0 37.0 33.0 37.0 7 26.809278388215876 35.0 11.0 37.0 0.0 37.0 8 31.03880013360021 35.0 19.0 37.0 17.0 37.0 9 35.82608324658259 39.0 32.0 39.0 32.0 39.0 10 36.63882597597634 38.0 35.0 39.0 33.0 39.0 11 36.91838685061887 39.0 37.0 39.0 33.0 39.0 12 36.89481177729723 39.0 35.0 39.0 33.0 39.0 13 36.8194178639082 39.0 35.0 39.0 33.0 39.0 14 37.906145853395714 40.0 37.0 41.0 33.0 41.0 15 37.97303860022088 40.0 37.0 41.0 33.0 41.0 16 37.952535356515085 40.0 37.0 41.0 33.0 41.0 17 37.840196597095414 40.0 36.0 41.0 33.0 41.0 18 37.63143164325819 39.0 36.0 41.0 33.0 41.0 19 37.47733306678304 39.0 36.0 41.0 32.0 41.0 20 37.45181006341134 39.0 35.0 41.0 32.0 41.0 21 37.43252336175182 39.0 35.0 41.0 33.0 41.0 22 37.47319584864169 39.0 35.0 41.0 33.0 41.0 23 37.4522098888534 39.0 35.0 41.0 33.0 41.0 24 37.35374799782534 39.0 35.0 41.0 33.0 41.0 25 37.26005231862187 39.0 35.0 41.0 33.0 41.0 26 37.11074677153145 39.0 35.0 41.0 32.0 41.0 27 37.02165639879175 39.0 35.0 41.0 32.0 41.0 28 36.98191521262668 39.0 35.0 41.0 32.0 41.0 29 36.92944299927593 39.0 35.0 41.0 32.0 41.0 30 36.7783333617762 39.0 35.0 41.0 31.0 41.0 31 36.565143510516144 39.0 35.0 40.0 31.0 41.0 32 36.3679076695784 39.0 35.0 40.0 30.0 41.0 33 36.19932761062853 39.0 35.0 40.0 30.0 41.0 34 35.90509021671026 38.0 35.0 40.0 29.0 41.0 35 35.632277615382556 38.0 35.0 40.0 27.0 41.0 36 35.473485965883185 38.0 34.0 40.0 26.0 41.0 37 35.33656037973665 38.0 34.0 40.0 25.0 41.0 38 35.0853481041204 38.0 34.0 40.0 24.0 41.0 39 34.93045962860117 38.0 34.0 40.0 24.0 41.0 40 34.66558258711441 38.0 34.0 40.0 23.0 41.0 41 34.50088376050456 38.0 33.0 40.0 23.0 41.0 42 34.41161054076391 38.0 33.0 40.0 22.0 41.0 43 34.34305266725015 38.0 33.0 40.0 22.0 41.0 44 34.14924947401013 37.0 33.0 40.0 21.0 41.0 45 34.06120498611582 37.0 33.0 40.0 21.0 41.0 46 33.84480190355918 37.0 33.0 40.0 20.0 41.0 47 33.64219767467374 37.0 33.0 40.0 20.0 41.0 48 33.46201048810397 36.0 32.0 40.0 18.0 41.0 49 33.30166829603661 36.0 32.0 40.0 18.0 41.0 50 33.105836720066115 36.0 32.0 40.0 17.0 41.0 51 30.81577311368939 35.0 27.0 38.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 16.0 9 26.0 10 23.0 11 20.0 12 15.0 13 15.0 14 23.0 15 29.0 16 75.0 17 128.0 18 252.0 19 408.0 20 730.0 21 1104.0 22 1661.0 23 2559.0 24 3866.0 25 5507.0 26 7198.0 27 8372.0 28 8913.0 29 9278.0 30 10695.0 31 13115.0 32 15897.0 33 21660.0 34 31118.0 35 35528.0 36 38020.0 37 57065.0 38 67833.0 39 69024.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.190116997701004 17.095706996213845 20.8516281915944 19.862547814490746 2 32.22666201828957 26.481853044646364 24.72969118360521 16.561793753458858 3 29.44324307192713 26.43699458041489 28.83814139680481 15.281620950853164 4 26.275114035579588 23.33615324041455 32.94122809797674 17.447504626029122 5 25.583952372013197 27.11596644391839 28.328363958174357 18.97171722589406 6 25.6054064201239 32.3373454028607 28.504628467083883 13.552619709931518 7 57.121403094746434 27.16887017619137 11.66880800821105 4.040918720851141 8 76.37421711009095 5.79259298988978 13.324426652754044 4.508763247265218 9 71.3115493479676 5.724573905538801 14.388839994246414 8.57503675224719 10 42.79765663283591 20.85699170362208 21.745628128207443 14.599723535334574 11 31.76588757591198 22.958513234465926 27.050385319579988 18.225213870042104 12 28.12260013311262 20.80676972736293 31.65569178334337 19.414938356181082 13 24.101428888363372 21.775127444359658 35.18171334953764 18.941730317739328 14 20.06928682355752 24.41080601395976 34.36645952133093 21.15344764115179 15 19.37666238398358 23.167202611542763 38.00023892008123 19.455896084392425 16 24.352051177656584 24.284032093305605 31.132261768642472 20.23165496039534 17 24.581219418839094 23.642117221993324 30.488640325321388 21.288023033846198 18 24.340836561598717 24.059495976146998 31.389466549969647 20.210200912284638 19 24.271354701240192 25.52787929172386 28.242791561732805 21.95797444530315 20 24.239173629074138 27.31295361293484 30.085645535241927 18.36222722274909 21 24.2945153213597 25.565180079916328 31.420428642129412 18.71987595659456 22 23.654550818057483 22.51748626819023 31.52014120664393 22.30782170710836 23 22.728369809278387 24.4181198939975 32.62258672433255 20.230923572391564 24 24.373749021768546 22.959000826468447 30.783877282844806 21.883372868918205 25 23.27081591207741 26.514521708814932 28.47586053893544 21.73880184017222 26 21.817791744579807 23.766696978636155 29.382781663615155 25.032729613168886 27 23.190850823664793 23.64138583398955 30.10636819534886 23.061395146996798 28 20.68462793073268 24.254045185150876 30.461822765183005 24.599504118933442 29 22.46287596390844 24.160671316669063 28.97539854551306 24.40105417390944 30 23.44415486897184 23.02872648282823 31.772713863947207 21.754404784252728 31 25.629054632245925 22.74616691737022 29.17116673452322 22.453611715860635 32 25.64612035233398 24.78015695586561 28.242303969730287 21.33141872207012 33 24.062421528162094 22.855875117936318 28.264245609843506 24.817457744058082 34 22.46750808793234 23.288369224167983 30.288971400291093 23.95515128760858 35 20.987178768293845 24.883526460398997 31.925573956735963 22.2037208145712 36 23.866897135153188 24.643874991162395 29.808693277812857 21.68053459587156 37 21.9199422691069 26.139807254881404 30.70586256244225 21.234387913569442 38 23.383937256661117 24.728472203598916 28.268146345863638 23.619444193876333 39 23.580924425677573 24.12995302051056 28.74525512032552 23.54386743348636 40 23.29129477618308 23.38930076868879 31.058147784260044 22.261256670868086 41 20.8516281915944 25.093922409484637 29.693377769217825 24.36107162970313 42 21.739289432174733 23.478286309147958 32.20788972619271 22.5745345324846 43 23.23985381991765 23.431477476906423 29.49468402819257 23.83398467498336 44 22.708134741173975 23.646749346017227 29.131915578320683 24.513200334488115 45 21.745384332206182 22.99825198267098 28.49633940304111 26.760024282081723 46 23.922970215442525 24.912781980549955 27.72594403906587 23.438303764941647 47 20.420109269367764 23.711111490349335 32.459243403489694 23.409535836793204 48 21.592768035418683 23.948324999573355 29.713125245319727 24.745781719688235 49 21.92140504511445 22.64840472086577 31.838782580288118 23.591407653731665 50 21.063486916687594 23.628708441924136 31.234656089170826 24.073148552217447 51 21.055441648646077 23.535090777441066 29.04268624186026 26.36678133205259 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 85.0 1 342.5 2 600.0 3 4915.0 4 9230.0 5 6200.5 6 3171.0 7 2755.5 8 2340.0 9 2201.5 10 2063.0 11 1977.0 12 1891.0 13 1871.0 14 1851.0 15 1712.0 16 1573.0 17 1571.0 18 1569.0 19 1544.0 20 1519.0 21 1486.0 22 1453.0 23 1623.0 24 1793.0 25 2204.5 26 3105.0 27 3594.0 28 3979.0 29 4364.0 30 5010.5 31 5657.0 32 6748.5 33 7840.0 34 8731.5 35 9623.0 36 10324.5 37 11026.0 38 12261.0 39 13496.0 40 14385.0 41 15274.0 42 16903.0 43 18532.0 44 21209.5 45 23887.0 46 32130.5 47 40374.0 48 35997.0 49 31620.0 50 31205.5 51 30791.0 52 28540.0 53 26289.0 54 25047.0 55 23805.0 56 22711.0 57 21617.0 58 21075.0 59 20533.0 60 19128.0 61 17723.0 62 16262.5 63 14802.0 64 13410.5 65 12019.0 66 10247.0 67 8475.0 68 7212.5 69 5950.0 70 5005.0 71 4060.0 72 3446.5 73 2833.0 74 2357.0 75 1508.0 76 1135.0 77 851.0 78 567.0 79 419.0 80 271.0 81 226.0 82 181.0 83 132.5 84 84.0 85 71.0 86 58.0 87 39.0 88 20.0 89 22.5 90 25.0 91 16.0 92 7.0 93 7.5 94 8.0 95 5.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 410179.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.71269938738631 #Duplication Level Percentage of deduplicated Percentage of total 1 69.3321372659636 33.08023423255924 2 11.23863243103062 10.724509814141891 3 6.059346994276762 8.673234048653697 4 3.828323596645486 7.306386116975346 5 2.5959442352211424 6.19297534607624 6 1.972147196436084 5.6457879798738935 7 1.4854489438200078 4.961234523825617 8 1.026224256856567 3.9171143577153034 9 0.7778436639260714 3.340171881655901 >10 1.652544706735112 9.896559970981928 >50 0.013677115248281089 0.43867345937572794 >100 0.011650875952211828 1.1613366238548137 >500 0.0035459187680644696 1.1400676076426963 >1k 0.0025327991200460496 3.5217140366677397 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4761 1.1607127619892779 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 4619 1.1260937298106435 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCG 2399 0.5848666070179117 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGC 1640 0.3998254420630992 No Hit GAACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 1152 0.28085299344920145 No Hit GAATCTATCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 902 0.21990399313470463 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 887 0.21624705311583478 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTT 664 0.16188054483530362 No Hit GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 641 0.1562732368063699 TruSeq Adapter, Index 13 (95% over 21bp) GAATGAAACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCG 555 0.13530678069818297 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCT 553 0.134819188695667 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTT 515 0.1255549406478635 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTC 464 0.11312134458370614 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 443 0.1080016285572884 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.8759200251597475E-4 0.0 0.0 0.07557676038997609 0.0 2 4.8759200251597475E-4 0.0 0.0 0.48295987849207295 0.0 3 4.8759200251597475E-4 0.0 0.0 0.6687324314506593 0.0 4 4.8759200251597475E-4 0.0 0.0 1.1919186501503003 0.0 5 4.8759200251597475E-4 0.0 0.0 3.1042544840179533 0.0 6 4.8759200251597475E-4 0.0 0.0 3.8544147798887805 0.0 7 4.8759200251597475E-4 0.0 0.0 4.538262563417435 0.0 8 4.8759200251597475E-4 0.0 0.0 5.550991152643114 0.0 9 4.8759200251597475E-4 0.0 0.0 6.120986203584289 0.0 10 4.8759200251597475E-4 0.0 0.0 7.664214891547349 0.0 11 4.8759200251597475E-4 0.0 0.0 8.301985230838243 0.0 12 4.8759200251597475E-4 0.0 0.0 9.31495761606518 0.0 13 4.8759200251597475E-4 0.0 0.0 9.588009137474128 0.0 14 4.8759200251597475E-4 0.0 0.0 9.789140838511967 0.0 15 4.8759200251597475E-4 0.0 0.0 9.981252087503261 0.0 16 4.8759200251597475E-4 0.0 0.0 10.207250980669414 0.0 17 4.8759200251597475E-4 0.0 0.0 10.44275791788463 0.0 18 4.8759200251597475E-4 0.0 0.0 10.698987515206776 0.0 19 4.8759200251597475E-4 0.0 0.0 10.880371740142719 0.0 20 4.8759200251597475E-4 0.0 0.0 11.079065481167978 0.0 21 4.8759200251597475E-4 0.0 0.0 11.302626414321553 0.0 22 4.8759200251597475E-4 0.0 0.0 11.556418051631118 0.0 23 4.8759200251597475E-4 0.0 0.0 11.802895808902942 0.0 24 4.8759200251597475E-4 0.0 0.0 12.019142862018777 0.0 25 4.8759200251597475E-4 0.0 0.0 12.220274563056616 0.0 26 4.8759200251597475E-4 0.0 0.0 12.406047116015204 0.0 27 4.8759200251597475E-4 0.0 0.0 12.644723401246774 0.0 28 4.8759200251597475E-4 0.0 0.0 12.845855102284613 0.0 29 4.8759200251597475E-4 0.0 0.0 13.07989926349228 0.0 30 4.8759200251597475E-4 0.0 0.0 13.381718713049668 0.0 31 4.8759200251597475E-4 0.0 0.0 13.628440266322752 0.0 32 4.8759200251597475E-4 0.0 0.0 13.897103459709054 0.0 33 7.313880037739621E-4 0.0 0.0 14.130903824915464 0.0 34 7.313880037739621E-4 0.0 0.0 14.38688962623635 0.0 35 7.313880037739621E-4 0.0 0.0 14.647995143583655 0.0 36 7.313880037739621E-4 0.0 0.0 14.88837800082403 0.0 37 7.313880037739621E-4 0.0 0.0 15.16703683026191 0.0 38 7.313880037739621E-4 0.0 0.0 15.50737604801806 0.0 39 7.313880037739621E-4 0.0 0.0 16.12174197118819 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 20 7.0279744E-4 45.000004 4 CGCAATG 20 7.0279744E-4 45.000004 30 CATGCGG 50 2.1827873E-11 45.0 2 TAGACGG 30 2.1620763E-6 44.999996 2 CGTTTTT 1680 0.0 43.526787 1 AGACACG 75 0.0 42.0 24 AACACGT 75 0.0 42.0 41 CGTTTTA 380 0.0 41.44737 1 TACGGCT 180 0.0 40.0 7 GAATCTG 785 0.0 39.840763 1 ACACGAC 80 0.0 39.375004 26 GACACGA 80 0.0 39.375004 25 TGATACC 385 0.0 38.57143 4 TAGCGAC 35 6.238466E-6 38.571426 29 TTGAGCG 35 6.238466E-6 38.571426 1 TTCGGTA 35 6.238466E-6 38.571426 24 TCGGTAG 35 6.238466E-6 38.571426 25 AATCTGT 815 0.0 38.09816 2 ACACGCG 195 0.0 38.076923 36 ACAACGA 90 0.0 37.5 13 >>END_MODULE