SRR2936551.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936551.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	70812
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGC	230	0.32480370558662375	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCG	211	0.2979720951251201	No Hit
GAATCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTC	192	0.27114048466361634	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	141	0.19911879342484323	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTAATG	25	3.853712E-5	45.0	45
TTAGGAT	20	6.988478E-4	45.0	5
TTAATCA	20	6.988478E-4	45.0	12
AGTCAAG	25	3.853712E-5	45.0	12
CCCTACA	25	3.853712E-5	45.0	27
TGGGTTT	20	6.988478E-4	45.0	31
GTGGGTT	20	6.988478E-4	45.0	30
CTGAGTG	20	6.988478E-4	45.0	26
GACGTAG	20	6.988478E-4	45.0	9
TCTTACG	25	3.853712E-5	45.0	1
ACCGATA	20	6.988478E-4	45.0	10
TCGGGGC	20	6.988478E-4	45.0	5
TCGGGCG	20	6.988478E-4	45.0	19
TGAGTGG	20	6.988478E-4	45.0	27
TATGACC	25	3.853712E-5	45.0	28
ATCAACG	20	6.988478E-4	45.0	15
TCGGATC	20	6.988478E-4	45.0	38
GTTAATC	40	6.661139E-9	45.0	40
TATCTAA	20	6.988478E-4	45.0	45
CGGATCA	20	6.988478E-4	45.0	39