##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936551.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 70812 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06258826187652 33.0 31.0 34.0 30.0 34.0 2 32.20171722306954 33.0 31.0 34.0 30.0 34.0 3 32.09422131842061 33.0 31.0 34.0 30.0 34.0 4 35.800132745862285 37.0 35.0 37.0 35.0 37.0 5 35.879003558718864 37.0 35.0 37.0 35.0 37.0 6 35.85670507823533 37.0 35.0 37.0 35.0 37.0 7 26.727433203411852 36.0 10.0 37.0 0.0 37.0 8 31.110630966502853 36.0 19.0 37.0 17.0 37.0 9 36.040049709088855 39.0 32.0 39.0 32.0 39.0 10 36.77985369711348 38.0 35.0 39.0 34.0 39.0 11 37.04732248771395 39.0 37.0 39.0 34.0 39.0 12 36.86965486075806 39.0 35.0 39.0 33.0 39.0 13 36.62856577981133 39.0 35.0 39.0 33.0 39.0 14 37.81635880924137 40.0 36.0 41.0 33.0 41.0 15 37.96509066259956 40.0 36.0 41.0 33.0 41.0 16 37.9901570355307 40.0 36.0 41.0 33.0 41.0 17 37.882195108173754 40.0 36.0 41.0 33.0 41.0 18 37.81703666045303 40.0 36.0 41.0 33.0 41.0 19 37.67930576738406 39.0 36.0 41.0 33.0 41.0 20 37.739337965316615 39.0 35.0 41.0 33.0 41.0 21 37.670394848330794 39.0 35.0 41.0 33.0 41.0 22 37.65035587188612 39.0 35.0 41.0 33.0 41.0 23 37.65007343388126 39.0 35.0 41.0 33.0 41.0 24 37.562178726769474 39.0 35.0 41.0 33.0 41.0 25 37.46723719143648 39.0 35.0 41.0 33.0 41.0 26 37.31385923289838 39.0 35.0 41.0 33.0 41.0 27 37.18862622154437 39.0 35.0 41.0 33.0 41.0 28 37.16604530305598 39.0 35.0 41.0 33.0 41.0 29 37.176467265435235 39.0 35.0 41.0 33.0 41.0 30 37.13153137886234 39.0 35.0 41.0 32.0 41.0 31 37.00103089871773 39.0 35.0 41.0 32.0 41.0 32 36.82671016211941 39.0 35.0 41.0 32.0 41.0 33 36.70125120036152 39.0 35.0 41.0 31.0 41.0 34 36.5710755239225 39.0 35.0 41.0 31.0 41.0 35 36.50043777890753 39.0 35.0 41.0 31.0 41.0 36 36.34134045077106 38.0 35.0 40.0 30.0 41.0 37 36.279274699203526 38.0 35.0 40.0 30.0 41.0 38 36.1480116364458 38.0 35.0 40.0 30.0 41.0 39 36.1543664915551 38.0 35.0 40.0 30.0 41.0 40 35.913842286618085 38.0 35.0 40.0 29.0 41.0 41 35.883847370502174 38.0 35.0 40.0 29.0 41.0 42 35.805018923346324 38.0 35.0 40.0 29.0 41.0 43 35.782889905665705 38.0 35.0 40.0 29.0 41.0 44 35.559453200022595 38.0 34.0 40.0 29.0 41.0 45 35.41275490029938 38.0 34.0 40.0 28.0 41.0 46 35.266790939388805 37.0 34.0 40.0 27.0 41.0 47 35.17461729650342 37.0 34.0 40.0 27.0 41.0 48 35.13631870304468 37.0 34.0 40.0 27.0 41.0 49 34.96873411286223 37.0 34.0 40.0 27.0 41.0 50 34.7706744619556 37.0 34.0 40.0 26.0 41.0 51 32.66802236908998 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 2.0 10 4.0 11 3.0 12 3.0 13 4.0 14 2.0 15 1.0 16 4.0 17 17.0 18 30.0 19 45.0 20 65.0 21 135.0 22 194.0 23 289.0 24 376.0 25 543.0 26 630.0 27 825.0 28 953.0 29 1188.0 30 1518.0 31 1808.0 32 2376.0 33 3470.0 34 6225.0 35 8040.0 36 6402.0 37 9949.0 38 12605.0 39 13099.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.851833022651526 18.642320510647913 23.853301700276788 16.652544766423773 2 28.02491103202847 26.24131503135062 27.765068067559174 17.96870586906174 3 30.88459583121505 25.950403886346944 27.801785008190706 15.363215274247302 4 27.726938936903352 25.628424560808906 27.97266000112975 18.671976501157996 5 25.874145625035304 29.47381799694967 25.788002033553635 18.86403434446139 6 26.86973959215952 34.96017624131503 24.214822346494945 13.955261820030504 7 61.906174094786195 28.338417217420776 6.066768344348415 3.6886403434446136 8 84.74269897757442 5.23781280009038 6.688131955035869 3.3313562672993275 9 80.27029317064904 5.9156640117494215 8.22177032141445 5.592272496187086 10 49.37298762921539 23.00598768570299 14.530023159916396 13.091001525165227 11 38.59374117381235 21.32830593684686 23.371744901994013 16.706207987346776 12 34.56476303451392 21.418686098401402 25.858611534768116 18.157939332316555 13 23.308196350900978 30.048579336835562 29.31565271422923 17.32757159803423 14 18.5759475795063 31.77568773654183 28.28192961644919 21.366435067502685 15 17.5916511325764 23.94085748178275 40.10902106987516 18.35847031576569 16 21.342427837089758 21.907303846805625 35.66203468338699 21.088233632717618 17 22.144551770886288 21.85787719595549 27.783426537874938 28.214144495283282 18 25.440603287578377 22.970682935095745 29.418742586002374 22.169971191323505 19 25.741399762752078 26.817488561260806 25.273964864712195 22.167146811274925 20 28.716884143930404 24.9590464892956 27.088629045924417 19.235440320849573 21 24.99858780997571 26.806191041066484 26.208834660791958 21.98638648816585 22 23.834943229961024 23.374569282042593 27.147941026944583 25.6425464610518 23 22.154437101056317 26.268146641812123 27.256679658814893 24.32073659831667 24 23.457888493475682 22.282946393266677 32.449302378128 21.80986273512964 25 20.27763655877535 25.895328475399648 29.73930972151613 24.087725244308874 26 19.992374173868836 29.65881489013162 27.30045754956787 23.04835338643168 27 20.41179461108287 29.874879963847935 27.769304637632043 21.944020787437157 28 19.279218211602554 26.91634186296108 32.973224877139465 20.8312150482969 29 20.541716093317515 24.285431847709425 31.332260068914874 23.840591990058183 30 21.314184036603965 27.119697226458793 30.05422809693272 21.51189064000452 31 27.006722024515618 25.29797209512512 25.683499971756202 22.011805908603062 32 27.38236457097667 26.879624922329548 25.474495848161325 20.263514658532454 33 25.377054736485345 26.971417273908376 24.809354346720895 22.842173642885385 34 22.14878834095916 26.817488561260806 27.575834604304355 23.457888493475682 35 21.411625148279953 26.947410043495452 28.67028187312885 22.970682935095745 36 25.16240185279331 27.503812913065584 26.70168897926905 20.632096254872057 37 23.010224255775857 27.184657967576115 28.543184770942776 21.261933005705245 38 22.09653731006044 28.235327345647633 26.087386318703043 23.580749025588883 39 22.676947410043496 27.588544314522963 27.280686889227812 22.45382138620573 40 23.247472179856523 25.141219002428965 27.803197198214992 23.80811161949952 41 19.567304976557644 25.627012370784612 28.90470541716093 25.900977235496807 42 22.861944303225442 23.949330621928485 27.73682426707338 25.45190080777269 43 24.00864260294865 25.51403716884144 26.09585945884878 24.381460769361123 44 22.462294526351464 27.256679658814893 26.87397616223239 23.407049652601252 45 21.308535276506806 29.283172343670564 25.29514771507654 24.113144664746088 46 23.363271761848274 28.345478167542225 26.100096028921655 22.19115404168785 47 20.754956786985257 26.443258204824044 29.948313845110995 22.853471163079703 48 23.133084787889057 23.789753149183753 30.171439868948767 22.905722193978423 49 22.91843190419703 23.26018189007513 30.14602044851155 23.67536575721629 50 20.40473366096142 25.964525786589842 29.28458453369485 24.346156018753884 51 20.722476416426595 26.931875953228268 26.889510252499576 25.45613737784556 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 41.0 1 91.5 2 142.0 3 257.5 4 373.0 5 269.0 6 165.0 7 142.0 8 119.0 9 141.5 10 164.0 11 142.5 12 121.0 13 127.5 14 134.0 15 131.5 16 129.0 17 143.0 18 157.0 19 154.5 20 152.0 21 174.5 22 197.0 23 233.0 24 269.0 25 307.5 26 484.0 27 622.0 28 782.5 29 943.0 30 1029.5 31 1116.0 32 1317.5 33 1519.0 34 1734.5 35 1950.0 36 2060.5 37 2171.0 38 2471.5 39 2772.0 40 3331.5 41 3891.0 42 4583.5 43 5276.0 44 5483.0 45 5690.0 46 5980.0 47 6270.0 48 5929.5 49 5589.0 50 5309.5 51 5030.0 52 4806.5 53 4583.0 54 4125.0 55 3667.0 56 3414.5 57 3162.0 58 3172.0 59 3182.0 60 3017.5 61 2853.0 62 2579.5 63 2306.0 64 2075.0 65 1844.0 66 1520.5 67 1197.0 68 1069.5 69 942.0 70 794.5 71 647.0 72 555.0 73 463.0 74 357.5 75 218.0 76 184.0 77 141.0 78 98.0 79 71.5 80 45.0 81 27.5 82 10.0 83 12.5 84 15.0 85 10.0 86 5.0 87 7.0 88 9.0 89 4.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 70812.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.85821612156132 #Duplication Level Percentage of deduplicated Percentage of total 1 66.42845899575003 29.798621702536295 2 10.876751141193138 9.758233067841608 3 6.28994175979852 8.464667005592272 4 4.092554698567606 7.343388126306276 5 3.0725641429246027 6.891487318533581 6 2.30757122619235 6.210811726825962 7 1.7786872343774593 5.585211546065639 8 1.3536911695262082 4.857933683556459 9 1.0514717456319849 4.245043213014743 >10 2.723122934046907 15.391459074733097 >50 0.012592475995592633 0.36010845619386544 >100 0.012592475995592633 1.0930350788002035 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGC 230 0.32480370558662375 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCG 211 0.2979720951251201 No Hit GAATCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTC 192 0.27114048466361634 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 141 0.19911879342484323 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0847314014573801 0.0 2 0.0 0.0 0.0 0.4208326272383212 0.0 3 0.0 0.0 0.0 0.532395639157205 0.0 4 0.0 0.0 0.0 0.7060950121448342 0.0 5 0.0 0.0 0.0 1.4376094447268823 0.0 6 0.0 0.0 0.0 1.7200474495848161 0.0 7 0.0 0.0 0.0 2.073094955657233 0.0 8 0.0 0.0 0.0 2.748121787267695 0.0 9 0.0 0.0 0.0 2.9712478111054623 0.0 10 0.0 0.0 0.0 3.9230638874766988 0.0 11 0.0 0.0 0.0 4.574083488674236 0.0 12 0.0 0.0 0.0 5.53719708523979 0.0 13 0.0 0.0 0.0 5.79280347963622 0.0 14 0.0 0.0 0.0 5.902954301530814 0.0 15 0.0 0.0 0.0 6.1105462351013955 0.0 16 0.0 0.0 0.0 6.503135061853923 0.0 17 0.0 0.0 0.0 6.950799299553748 0.0 18 0.0 0.0 0.0 7.49731683895385 0.0 19 0.0 0.0 0.0 7.75151104332599 0.0 20 0.0 0.0 0.0 8.0508953284754 0.0 21 0.0 0.0 0.0 8.375699034062023 0.0 22 0.0 0.0 0.0 8.748517200474495 0.0 23 0.0 0.0 0.0 9.050725865672485 0.0 24 0.0 0.0 0.0 9.265378749364514 0.0 25 0.0 0.0 0.0 9.501214483420888 0.0 26 0.0 0.0 0.0 9.758233067841608 0.0 27 0.0 0.0 0.0 9.981359091679376 0.0 28 0.0 0.0 0.0 10.210133875614302 0.0 29 0.0 0.0 0.0 10.43043551940349 0.0 30 0.0 0.0 0.0 10.752414844941535 0.0 31 0.0014121900242896684 0.0 0.0 11.044738179969496 0.0 32 0.0014121900242896684 0.0 0.0 11.318703044681692 0.0 33 0.0014121900242896684 0.0 0.0 11.57995819917528 0.0 34 0.0014121900242896684 0.0 0.0 11.869457154154663 0.0 35 0.0014121900242896684 0.0 0.0 12.219680280178501 0.0 36 0.0014121900242896684 0.0 0.0 12.513415805230752 0.0 37 0.0014121900242896684 0.0 0.0 12.808563520307292 0.0 38 0.0014121900242896684 0.0 0.0 13.093825905213805 0.0 39 0.0014121900242896684 0.0 0.0 13.407332090606111 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAATG 25 3.853712E-5 45.0 45 TTAGGAT 20 6.988478E-4 45.0 5 TTAATCA 20 6.988478E-4 45.0 12 AGTCAAG 25 3.853712E-5 45.0 12 CCCTACA 25 3.853712E-5 45.0 27 TGGGTTT 20 6.988478E-4 45.0 31 GTGGGTT 20 6.988478E-4 45.0 30 CTGAGTG 20 6.988478E-4 45.0 26 GACGTAG 20 6.988478E-4 45.0 9 TCTTACG 25 3.853712E-5 45.0 1 ACCGATA 20 6.988478E-4 45.0 10 TCGGGGC 20 6.988478E-4 45.0 5 TCGGGCG 20 6.988478E-4 45.0 19 TGAGTGG 20 6.988478E-4 45.0 27 TATGACC 25 3.853712E-5 45.0 28 ATCAACG 20 6.988478E-4 45.0 15 TCGGATC 20 6.988478E-4 45.0 38 GTTAATC 40 6.661139E-9 45.0 40 TATCTAA 20 6.988478E-4 45.0 45 CGGATCA 20 6.988478E-4 45.0 39 >>END_MODULE