##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936550.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 254377 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.130279073972886 33.0 31.0 34.0 30.0 34.0 2 32.25469283779587 33.0 31.0 34.0 30.0 34.0 3 32.099667029644976 33.0 31.0 34.0 30.0 34.0 4 35.851610011911454 37.0 35.0 37.0 35.0 37.0 5 35.93907468049391 37.0 35.0 37.0 35.0 37.0 6 35.9126493354352 37.0 35.0 37.0 35.0 37.0 7 26.72777806169583 36.0 10.0 37.0 0.0 37.0 8 31.156256265307004 37.0 19.0 37.0 17.0 37.0 9 36.04821583712364 39.0 32.0 39.0 32.0 39.0 10 36.763952715850884 38.0 35.0 39.0 33.0 39.0 11 37.119130267280454 39.0 37.0 39.0 34.0 39.0 12 37.24109884148331 39.0 37.0 39.0 34.0 39.0 13 37.25600191841244 39.0 37.0 39.0 34.0 39.0 14 38.50800976503379 40.0 38.0 41.0 34.0 41.0 15 38.59173588807164 40.0 38.0 41.0 35.0 41.0 16 38.520656348647876 40.0 38.0 41.0 34.0 41.0 17 38.443027474968254 40.0 38.0 41.0 34.0 41.0 18 38.32369278669062 40.0 37.0 41.0 34.0 41.0 19 38.21784595305393 40.0 37.0 41.0 34.0 41.0 20 38.271781646925625 40.0 37.0 41.0 34.0 41.0 21 38.219905887717836 40.0 37.0 41.0 34.0 41.0 22 38.19722301937675 40.0 37.0 41.0 34.0 41.0 23 38.14403031720635 40.0 37.0 41.0 34.0 41.0 24 38.114007948831855 40.0 37.0 41.0 34.0 41.0 25 38.0000864858065 40.0 37.0 41.0 34.0 41.0 26 37.87728450292283 40.0 37.0 41.0 33.0 41.0 27 37.774024381135085 40.0 36.0 41.0 33.0 41.0 28 37.75654245470306 40.0 36.0 41.0 33.0 41.0 29 37.733368189734136 40.0 36.0 41.0 33.0 41.0 30 37.661305857054685 40.0 36.0 41.0 33.0 41.0 31 37.55749930221679 40.0 36.0 41.0 33.0 41.0 32 37.4252113988293 40.0 36.0 41.0 33.0 41.0 33 37.307492422664 40.0 36.0 41.0 32.0 41.0 34 37.17162715182583 40.0 36.0 41.0 32.0 41.0 35 37.08140279978143 40.0 36.0 41.0 31.0 41.0 36 36.90381992082617 40.0 35.0 41.0 31.0 41.0 37 36.819394048990276 39.0 35.0 41.0 31.0 41.0 38 36.68585210140854 39.0 35.0 41.0 30.0 41.0 39 36.62873608856147 39.0 35.0 41.0 30.0 41.0 40 36.47003856480735 39.0 35.0 41.0 30.0 41.0 41 36.347633630398974 39.0 35.0 41.0 30.0 41.0 42 36.28513977285682 39.0 35.0 41.0 30.0 41.0 43 36.251941016679964 39.0 35.0 41.0 30.0 41.0 44 36.08445732122008 39.0 35.0 40.0 29.0 41.0 45 35.99166198201881 39.0 35.0 40.0 29.0 41.0 46 35.83478459137422 39.0 35.0 40.0 28.0 41.0 47 35.703774319219114 38.0 35.0 40.0 27.0 41.0 48 35.614568140987586 38.0 35.0 40.0 27.0 41.0 49 35.43814888924706 38.0 35.0 40.0 27.0 41.0 50 35.25716554562716 38.0 34.0 40.0 26.0 41.0 51 33.1983394725152 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 18.0 10 24.0 11 15.0 12 9.0 13 6.0 14 12.0 15 9.0 16 22.0 17 38.0 18 63.0 19 151.0 20 237.0 21 380.0 22 595.0 23 967.0 24 1355.0 25 1900.0 26 2350.0 27 2787.0 28 3179.0 29 3597.0 30 4343.0 31 5405.0 32 7118.0 33 10198.0 34 16323.0 35 20387.0 36 23151.0 37 38980.0 38 51555.0 39 59183.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.54790330886833 20.02264355661086 24.182217731949034 17.24723540257177 2 30.564084017029842 26.033800225649333 27.217476422789794 16.18463933453103 3 32.14166375104667 24.4157294094985 27.54494313558223 15.897663703872599 4 29.248320406326044 25.739748483550006 27.033497525326585 17.97843358479737 5 25.737389779736375 30.946587152140324 24.664965779138836 18.65105728898446 6 27.028387000397046 34.75825251496794 24.4003978347099 13.812962649925112 7 61.280697547341155 28.58670398660256 6.305994645742342 3.826603820313944 8 84.60670579494214 5.083792952979239 7.116602523026846 3.1928987290517616 9 78.06759258895262 8.051435467829245 8.941059922870386 4.939912020347752 10 40.75918813414735 28.59299386343891 17.031414003624544 13.616403998789197 11 29.93037892576766 27.81501472224297 24.911057210360998 17.34354914162837 12 28.32292227677817 24.445606324471157 27.461602267500602 19.769869131250072 13 24.45032373209842 26.0161099470471 29.173235001592126 20.360331319262354 14 20.21566415202632 28.11221140276047 29.013629376869766 22.65849506834344 15 20.30568801424657 27.67742366644783 32.158960912346636 19.85792740695896 16 23.125518423442372 26.647063217193377 31.2135138003829 19.013904558981352 17 23.470282297534762 26.609323956175285 28.364985828121252 21.555407918168704 18 23.54890575798913 26.7402320178318 28.87289338265645 20.83796884152262 19 24.473124535630188 28.069361616812845 26.75792229643403 20.69959155112294 20 26.186329738930798 26.681657539793296 28.17511017112396 18.95690255015194 21 24.911057210360998 27.15418453712403 28.016683898308415 19.918074354206553 22 24.151161465069563 25.968149636169933 27.667202616588764 22.213486282171736 23 22.678544050759307 27.270547258596494 29.077314379837798 20.9735943108064 24 22.717069546381946 25.545941653529997 30.411947621050643 21.325041179037413 25 22.178891959571818 28.390538452768922 27.873589200281472 21.556980387377788 26 22.006706581176758 29.82895466178153 27.458850446384698 20.705488310657017 27 22.225279801239893 29.22591272009655 28.182579399867123 20.366228078796432 28 21.41703062776902 28.37599311258486 29.246354819814684 20.96062143983143 29 21.489757328689308 27.656588449427428 29.21333296642385 21.640321255459416 30 22.22213486282172 27.55595042004584 28.824539954477018 21.39737476265543 31 22.729256182752373 27.28037519115329 27.863761267724673 22.12660735836966 32 23.282765344351102 28.249016223951063 27.6192423057116 20.848976125986233 33 22.96787838523137 27.95142642613129 28.10552840862185 20.97516678001549 34 22.208375757242205 27.753688423088562 28.64606469924561 21.391871120423623 35 22.883358165242925 27.13138373359227 28.480955432291445 21.504302668873365 36 22.760312449631844 28.07761708016055 27.535901437629974 21.62616903257763 37 22.826749273715784 28.286755484969163 28.333143326637234 20.55335191467782 38 22.57829913867999 27.79811067824528 27.758405830715827 21.8651843523589 39 23.13023583106963 26.903375698274605 28.43928499825063 21.52710347240513 40 24.382707556107665 26.58495068343443 28.564296300373073 20.468045460084834 41 21.530248410823305 27.070450551740134 28.915350051301807 22.48395098613475 42 22.266164000676163 27.701403821886412 28.18375875177394 21.848673425663485 43 23.068123297310684 27.091678886062816 27.77177181899307 22.068425997633433 44 21.93044182453602 27.904645467160943 27.700224469979595 22.464688238323433 45 22.206017053428575 27.342094607609962 27.707693698722764 22.744194640238703 46 22.336138880480547 28.16213730014899 27.287451302594178 22.214272516776283 47 22.44503237320984 27.127059443267278 28.70739099840001 21.72051718512287 48 22.33495952857373 26.066822079040165 29.13353015406267 22.464688238323433 49 21.784202188090905 26.491781882796005 28.883114432515516 22.84090149659757 50 20.97398742810867 27.333839144262257 29.04586499565605 22.64630843197302 51 21.40405775679405 26.433993639362047 27.86494061963149 24.29700798421241 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 83.0 1 266.0 2 449.0 3 1186.5 4 1924.0 5 1395.0 6 866.0 7 733.0 8 600.0 9 571.5 10 543.0 11 570.5 12 598.0 13 625.5 14 653.0 15 627.0 16 601.0 17 621.5 18 642.0 19 688.5 20 735.0 21 874.0 22 1013.0 23 1114.0 24 1215.0 25 1652.0 26 2511.0 27 2933.0 28 3586.5 29 4240.0 30 4767.5 31 5295.0 32 6180.0 33 7065.0 34 8044.0 35 9023.0 36 9390.0 37 9757.0 38 10590.5 39 11424.0 40 12773.0 41 14122.0 42 15096.0 43 16070.0 44 17023.0 45 17976.0 46 19137.5 47 20299.0 48 20368.0 49 20437.0 50 19954.5 51 19472.0 52 17995.5 53 16519.0 54 15223.0 55 13927.0 56 12843.5 57 11760.0 58 11250.0 59 10740.0 60 10159.5 61 9579.0 62 8593.5 63 7608.0 64 6295.0 65 4982.0 66 4089.5 67 3197.0 68 2618.0 69 2039.0 70 1741.5 71 1444.0 72 1211.0 73 978.0 74 808.0 75 521.0 76 404.0 77 303.5 78 203.0 79 154.0 80 105.0 81 78.0 82 51.0 83 44.0 84 37.0 85 29.0 86 21.0 87 17.5 88 14.0 89 7.5 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 254377.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.04241181980595 #Duplication Level Percentage of deduplicated Percentage of total 1 61.088071502414884 25.682898593822785 2 12.987933849601305 10.920881271866714 3 7.352147290620094 9.273060124563614 4 4.95688515402013 8.335976279551861 5 3.519588662316537 7.398599798871588 6 2.686513192522138 6.776849639961441 7 1.937733632426613 5.70268967600977 8 1.4386214096456857 4.838649100569094 9 1.0856748620828538 4.107995068868853 >10 2.9209810553278146 15.54876261236977 >50 0.012924694510959466 0.38204168535176786 >100 0.011930487240885662 0.6600041807116427 >500 9.94207270073805E-4 0.37159196748109585 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 889 0.34948128171965237 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06918864519984118 0.0 2 0.0 0.0 0.0 0.2767545807993647 0.0 3 0.0 0.0 0.0 0.39547600608545586 0.0 4 0.0 0.0 0.0 0.525204715835158 0.0 5 0.0 0.0 0.0 0.9745377923318539 0.0 6 0.0 0.0 0.0 1.3452474083741848 0.0 7 0.0 0.0 0.0 1.6593481328893729 0.0 8 0.0 0.0 0.0 2.1625382797973085 0.0 9 0.0 0.0 0.0 2.3712835673036476 0.0 10 0.0 0.0 0.0 2.8811567083502045 0.0 11 0.0 0.0 0.0 3.4940265825919794 0.0 12 0.0 0.0 0.0 4.0306317001930205 0.0 13 0.0 0.0 0.0 4.3195729173628115 0.0 14 0.0 0.0 0.0 4.423355885162573 0.0 15 0.0 0.0 0.0 4.647825864759786 0.0 16 0.0 0.0 0.0 4.983548040899924 0.0 17 0.0 0.0 0.0 5.377844695078564 0.0 18 0.0 0.0 0.0 5.7792174606980975 0.0 19 0.0 0.0 0.0 6.030026299547522 0.0 20 0.0 0.0 0.0 6.288304367140111 0.0 21 0.0 0.0 0.0 6.616164197234813 0.0 22 0.0 0.0 0.0 6.951100138770408 0.0 23 0.0 0.0 0.0 7.308443766535497 0.0 24 0.0 0.0 0.0 7.557287018873562 0.0 25 0.0 0.0 0.0 7.803378450095724 0.0 26 0.0 0.0 0.0 8.04593182559744 0.0 27 0.0 0.0 0.0 8.281409089658263 0.0 28 0.0 0.0 0.0 8.514920767207727 0.0 29 0.0 0.0 0.0 8.777523125125306 0.0 30 0.0 0.0 0.0 9.071574867224632 0.0 31 0.0 0.0 0.0 9.36012296709215 0.0 32 0.0 0.0 0.0 9.648277949657398 0.0 33 0.0 0.0 0.0 9.892796911670473 0.0 34 0.0 0.0 0.0 10.154219917681237 0.0 35 0.0 0.0 0.0 10.430974498480602 0.0 36 0.0 0.0 0.0 10.692790621793637 0.0 37 0.0 0.0 0.0 10.991559771520224 0.0 38 0.0 0.0 0.0 11.274604229155937 0.0 39 0.0 0.0 0.0 11.578483903812058 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAATA 20 7.022918E-4 45.000004 1 TTGACGG 20 7.022918E-4 45.000004 2 TTACGCG 20 7.022918E-4 45.000004 1 AGTACGG 35 1.2069358E-7 45.000004 2 CACAACG 55 1.8189894E-12 45.0 12 ACAACGA 60 3.6379788E-12 41.249996 13 ACGAGCG 60 3.6379788E-12 41.249996 16 GCGATGC 55 6.002665E-11 40.909092 9 AGGCGAT 90 0.0 40.0 7 CACGACC 40 3.4440745E-7 39.375004 27 CGTTTTT 410 0.0 38.963413 1 GCGATTG 35 6.22912E-6 38.57143 9 TACGAAT 65 9.094947E-12 38.07692 12 TGCGACG 30 1.13742426E-4 37.499996 1 CGAATAT 60 1.546141E-10 37.499996 14 GCGATTC 30 1.13742426E-4 37.499996 9 TGGGCCG 30 1.13742426E-4 37.499996 6 ATGGGCG 55 2.732122E-9 36.81818 5 CGATGCG 55 2.732122E-9 36.81818 10 CGATTGG 25 0.0021040316 36.0 10 >>END_MODULE