##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936549.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 58252 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.919384742154776 31.0 31.0 34.0 30.0 34.0 2 32.03646226738996 33.0 31.0 34.0 30.0 34.0 3 31.964722241296435 33.0 31.0 34.0 30.0 34.0 4 35.70620751218842 37.0 35.0 37.0 35.0 37.0 5 35.777707203186154 37.0 35.0 37.0 35.0 37.0 6 35.73832658106159 37.0 35.0 37.0 35.0 37.0 7 26.989459589370323 35.0 17.0 37.0 0.0 37.0 8 31.17190826066058 35.0 23.0 37.0 17.0 37.0 9 35.897531415230375 39.0 32.0 39.0 32.0 39.0 10 36.687993545286 38.0 35.0 39.0 33.0 39.0 11 36.96558058092426 39.0 37.0 39.0 33.0 39.0 12 36.82575705555174 39.0 35.0 39.0 33.0 39.0 13 36.50312435624528 39.0 35.0 39.0 32.0 39.0 14 37.66686122364897 39.0 36.0 41.0 33.0 41.0 15 37.778496875643754 40.0 36.0 41.0 33.0 41.0 16 37.822340863833 40.0 36.0 41.0 33.0 41.0 17 37.67932431504498 39.0 36.0 41.0 33.0 41.0 18 37.59937856210946 39.0 36.0 41.0 33.0 41.0 19 37.455126004257366 39.0 36.0 41.0 32.0 41.0 20 37.57045251665179 39.0 35.0 41.0 33.0 41.0 21 37.56564581473597 39.0 35.0 41.0 33.0 41.0 22 37.54492549612031 39.0 35.0 41.0 33.0 41.0 23 37.549079859918976 39.0 35.0 41.0 33.0 41.0 24 37.48865275012017 39.0 35.0 41.0 33.0 41.0 25 37.447572615532515 39.0 35.0 41.0 33.0 41.0 26 37.26023140836366 39.0 35.0 41.0 33.0 41.0 27 37.22172629265948 39.0 35.0 41.0 32.0 41.0 28 37.22167479228181 39.0 35.0 41.0 32.0 41.0 29 37.21089404655634 39.0 35.0 41.0 32.0 41.0 30 37.13290530797226 39.0 35.0 41.0 32.0 41.0 31 36.996652475451484 39.0 35.0 41.0 32.0 41.0 32 36.7820675684955 39.0 35.0 40.0 31.0 41.0 33 36.631566298152855 39.0 35.0 40.0 31.0 41.0 34 36.54025612854494 39.0 35.0 40.0 31.0 41.0 35 36.44403625626588 39.0 35.0 40.0 30.0 41.0 36 35.96523724507313 38.0 35.0 40.0 30.0 41.0 37 35.992120442216574 38.0 35.0 40.0 30.0 41.0 38 35.77520085147291 38.0 35.0 40.0 29.0 41.0 39 35.8198173453272 38.0 35.0 40.0 29.0 41.0 40 35.65436379866786 38.0 35.0 40.0 29.0 41.0 41 35.31741399436929 38.0 34.0 40.0 26.0 41.0 42 35.36192748746824 38.0 34.0 40.0 27.0 41.0 43 35.07299320195015 38.0 34.0 40.0 25.0 41.0 44 34.99495296298839 38.0 34.0 40.0 25.0 41.0 45 34.95802719219941 37.0 34.0 40.0 26.0 41.0 46 34.76390510197075 37.0 34.0 40.0 24.0 41.0 47 34.50932156835817 37.0 33.0 40.0 23.0 41.0 48 34.325293552152715 37.0 33.0 40.0 23.0 41.0 49 34.12876811096615 37.0 33.0 40.0 23.0 41.0 50 33.909119000206005 36.0 33.0 40.0 22.0 41.0 51 31.410320675684954 35.0 29.0 38.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 2.0 11 4.0 12 2.0 13 1.0 14 0.0 15 4.0 16 5.0 17 8.0 18 28.0 19 38.0 20 54.0 21 102.0 22 163.0 23 244.0 24 347.0 25 508.0 26 641.0 27 764.0 28 966.0 29 1152.0 30 1380.0 31 1741.0 32 2309.0 33 3149.0 34 5007.0 35 6437.0 36 5275.0 37 8110.0 38 10001.0 39 9799.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.61992721279956 17.796813843301518 22.22927968138433 15.353979262514592 2 26.625695255098535 29.834168783904413 26.557028084872623 16.983107876124425 3 29.90970267115292 27.75527020531484 26.618828538075945 15.716198585456292 4 27.81878733777381 22.991485270891985 31.578314907642657 17.611412483691545 5 28.934628853944925 26.725262651926112 24.438645883403147 19.90146261072581 6 23.884158483828884 36.6287852777587 24.301311542951314 15.1857446954611 7 58.19027672869601 27.075465220078282 10.209091533337912 4.525166517887798 8 76.95873103069422 7.807457254686534 9.798805191238069 5.435006523381172 9 72.10052873721075 5.907093318684337 10.909496669642243 11.082881274462679 10 45.289432122502234 21.3245897136579 17.894664560873448 15.491313602966422 11 35.9043466318753 22.306530247888485 23.939092220009613 17.850030900226603 12 32.9997253313191 20.536633935315525 28.510609077799902 17.953031655565475 13 22.09881205795509 28.656526814529975 32.268419968413106 16.976241159101836 14 18.8611549818032 32.48815491313603 27.830804092563344 20.819886012497424 15 15.599464396072237 24.483279544049992 42.18567602829088 17.731580031586898 16 18.088649316761657 23.29533749914166 34.64430405822976 23.971709125866923 17 18.225983657213487 22.356313946302272 31.70363249330495 27.71406990317929 18 21.269655977477168 24.078143239717093 33.04950902973288 21.602691753072854 19 23.599189727391334 26.920964087069972 26.5776282359404 22.902217949598295 20 25.35020256815217 25.818856004944035 29.928586142965045 18.90235528393875 21 21.98036118931539 29.106296779509716 28.61017647462748 20.303165556547416 22 20.358099292728145 24.347661882853807 27.492618279200716 27.801620545217332 23 18.816521321156355 29.08912998695324 28.67712696559775 23.41722172629266 24 22.91423470438783 22.28593009682071 31.391196868777037 23.40863833001442 25 17.865481013527432 28.568976172491933 30.017853464258735 23.5476893497219 26 18.11783286410767 28.433358511295747 30.223854974936483 23.224953649660097 27 21.951177641969373 28.568976172491933 26.948430955160337 22.531415230378357 28 16.675822289363456 25.77593902355284 35.42539311954954 22.12284556753416 29 21.053354391265536 24.406028977545834 32.689006386046835 21.8516102451418 30 23.98200920140081 27.751836846803545 29.010162741193433 19.25599121060221 31 26.8179633317311 24.333928448808624 27.477168165899883 21.370940053560393 32 27.73467005424706 27.99560530110554 25.67293826821397 18.59678637643343 33 26.53299457529355 24.665247545148663 25.556204078829914 23.245553800727873 34 24.50559637437341 25.099567396827577 29.73975142484378 20.65508480395523 35 24.86266565954817 24.680697658449496 27.935521527157864 22.521115154844466 36 27.859987639909363 22.924534779921718 31.245279132046967 17.970198448121952 37 24.315044976996496 27.40850099567397 29.973219803611894 18.30323422371764 38 23.504772368330702 27.30378356107945 27.008514729108015 22.182929341481838 39 25.868639703357825 25.848039552290047 28.22049028359541 20.06283046075671 40 29.082263269930646 22.1709125866923 27.94582160269175 20.8010025406853 41 22.323697040444962 24.385428826478062 28.321774359678635 24.969099773398337 42 25.17853464258738 21.329739751424846 30.512257089885324 22.979468516102454 43 25.46178671976928 23.37773810341276 28.37155805809243 22.78891711872554 44 22.380347455881346 25.640321362356655 29.853052255716545 22.126278926045458 45 21.317722996635307 26.787063105129437 26.58277827370734 25.31243562452791 46 26.36647668749571 26.424843782187736 25.803405891643205 21.40527363867335 47 20.677401634278652 24.263544599327062 32.8349241227769 22.224129643617385 48 24.20861086314633 22.873034402252284 29.338048479022177 23.58030625557921 49 21.84989356588615 20.797569182174 34.27521801826547 23.07731923367438 50 21.42072375197418 24.237794410492345 29.952619652544122 24.388862184989357 51 21.96147771750326 24.2721279956053 26.56732816040651 27.19906612648493 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 20.0 1 57.5 2 95.0 3 164.0 4 233.0 5 181.5 6 130.0 7 131.5 8 133.0 9 131.0 10 129.0 11 132.0 12 135.0 13 136.5 14 138.0 15 119.0 16 100.0 17 110.0 18 120.0 19 125.5 20 131.0 21 142.5 22 154.0 23 154.5 24 155.0 25 227.5 26 329.0 27 358.0 28 398.0 29 438.0 30 592.5 31 747.0 32 912.0 33 1077.0 34 1309.5 35 1542.0 36 1623.5 37 1705.0 38 1935.5 39 2166.0 40 2545.5 41 2925.0 42 3535.5 43 4146.0 44 4691.5 45 5237.0 46 6680.0 47 8123.0 48 7033.0 49 5943.0 50 5575.0 51 5207.0 52 4457.0 53 3707.0 54 3303.0 55 2899.0 56 2586.0 57 2273.0 58 2139.5 59 2006.0 60 1845.5 61 1685.0 62 1467.0 63 1249.0 64 1124.5 65 1000.0 66 821.0 67 642.0 68 534.0 69 426.0 70 352.0 71 278.0 72 242.0 73 206.0 74 157.5 75 87.5 76 66.0 77 65.0 78 64.0 79 40.5 80 17.0 81 15.5 82 14.0 83 14.0 84 14.0 85 8.5 86 3.0 87 2.5 88 2.0 89 3.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 58252.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.80168921238756 #Duplication Level Percentage of deduplicated Percentage of total 1 72.12854391241173 36.64251871180389 2 10.556550535599635 10.725811989287921 3 5.355996350488291 8.162809860605645 4 3.3453857331125603 6.798049852365584 5 2.5816916162606023 6.557714756574881 6 1.8686851620315617 5.695941770239648 7 1.1252661102287704 4.001579344915196 8 0.9191362822289054 3.7354940602897755 9 0.6927313891798736 3.1672732266703285 >10 1.371946068326969 8.806564581473598 >50 0.016895887540972526 0.6523381171461924 >100 0.030412597573750547 2.798187186706036 >500 0.0067583550163890106 2.2557165419213074 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCG 751 1.289226120991554 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGC 563 0.9664904209297535 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 469 0.8051225708988533 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCT 195 0.33475245485133553 No Hit GCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 178 0.3055689075053217 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCG 173 0.29698551122708233 No Hit CCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 149 0.2557852090915333 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTT 138 0.2369017372794067 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGC 116 0.19913479365515346 No Hit GAATCTATCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 108 0.18540135960997048 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTC 104 0.17853464258737897 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 99 0.1699512463091396 No Hit GAACTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCT 89 0.15278445375266084 No Hit CTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGCT 84 0.14420105747442147 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20256815216644922 0.0 2 0.0 0.0 0.0 1.3630433289844126 0.0 3 0.0 0.0 0.0 1.6531621231889033 0.0 4 0.0 0.0 0.0 2.1887660509510405 0.0 5 0.0 0.0 0.0 4.403282290736799 0.0 6 0.0 0.0 0.0 5.064203804161231 0.0 7 0.0 0.0 0.0 6.073611206482181 0.0 8 0.0 0.0 0.0 7.337087138639017 0.0 9 0.0 0.0 0.0 7.73020668818238 0.0 10 0.0 0.0 0.0 10.511227082331937 0.0 11 0.0 0.0 0.0 11.747236146398407 0.0 12 0.0 0.0 0.0 14.174620613884501 0.0 13 0.0 0.0 0.0 14.644990729932019 0.0 14 0.0 0.0 0.0 14.880175787955778 0.0 15 0.0 0.0 0.0 15.36427933804848 0.0 16 0.0 0.0 0.0 16.0749845498867 0.0 17 0.0 0.0 0.0 16.904140630364623 0.0 18 0.0 0.0 0.0 17.783080409256335 0.0 19 0.0 0.0 0.0 18.28606743116116 0.0 20 0.0 0.0 0.0 18.766737622742568 0.0 21 0.0 0.0 0.0 19.35384192817414 0.0 22 0.0017166792556478746 0.0 0.0 19.889445855936277 0.0 23 0.0017166792556478746 0.0 0.0 20.447366614021835 0.0 24 0.0017166792556478746 0.0 0.0 20.88683650346769 0.0 25 0.0017166792556478746 0.0 0.0 21.28338941152235 0.0 26 0.0017166792556478746 0.0 0.0 21.666208885531827 0.0 27 0.0017166792556478746 0.0 0.0 22.06791183135343 0.0 28 0.0017166792556478746 0.0 0.0 22.469614777175032 0.0 29 0.0017166792556478746 0.0 0.0 22.871317722996636 0.0 30 0.0017166792556478746 0.0 0.0 23.30907093318684 0.0 31 0.0017166792556478746 0.0 0.0 23.786307766256954 0.0 32 0.0017166792556478746 0.0 0.0 24.174277278033372 0.0 33 0.0017166792556478746 0.0 0.0 24.608597129712283 0.0 34 0.0017166792556478746 0.0 0.0 24.99141660372176 0.0 35 0.0017166792556478746 0.0 0.0 25.430886493167616 0.0 36 0.0017166792556478746 0.0 0.0 25.878939778891713 0.0 37 0.0017166792556478746 0.0 0.0 26.270342649179426 0.0 38 0.0017166792556478746 0.0 0.0 26.661745519467143 0.0 39 0.0017166792556478746 0.0 0.0 27.05143171049921 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACAAGC 30 2.1300912E-6 45.000004 13 AGAAGGG 30 2.1300912E-6 45.000004 3 TGTCACT 30 2.1300912E-6 45.000004 3 GAATGAC 30 2.1300912E-6 45.000004 1 ACTTATA 30 2.1300912E-6 45.000004 7 GTCTTAC 30 2.1300912E-6 45.000004 31 CTTACAC 30 2.1300912E-6 45.000004 33 CGAGATA 30 2.1300912E-6 45.000004 19 CAAGCGA 30 2.1300912E-6 45.000004 15 ACCGGCG 20 6.9782155E-4 45.0 20 CACACCG 20 6.9782155E-4 45.0 17 ATCTATC 25 3.8452323E-5 45.0 3 TACGGCT 85 0.0 45.0 7 ATGAAAC 35 1.1855809E-7 45.0 3 TACACGC 25 3.8452323E-5 45.0 35 CGGCGCA 20 6.9782155E-4 45.0 22 GCTGTCA 20 6.9782155E-4 45.0 1 ATACGGC 95 0.0 45.0 6 TGGGCGA 20 6.9782155E-4 45.0 6 TTGCGGG 20 6.9782155E-4 45.0 3 >>END_MODULE