##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936546.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 55509 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.870741681529122 31.0 31.0 34.0 30.0 34.0 2 31.977571204669513 33.0 31.0 34.0 30.0 34.0 3 31.81267902502297 33.0 31.0 34.0 30.0 34.0 4 35.61054964059882 37.0 35.0 37.0 33.0 37.0 5 35.73251184492605 37.0 35.0 37.0 35.0 37.0 6 35.71599200129709 37.0 35.0 37.0 35.0 37.0 7 26.909510169522058 35.0 15.0 37.0 0.0 37.0 8 31.176349781116574 35.0 19.0 37.0 17.0 37.0 9 35.89135095209786 39.0 32.0 39.0 32.0 39.0 10 36.67976364193194 38.0 35.0 39.0 33.0 39.0 11 36.97036516600912 39.0 37.0 39.0 33.0 39.0 12 36.75292294943162 39.0 35.0 39.0 33.0 39.0 13 36.487704696535694 39.0 35.0 39.0 33.0 39.0 14 37.5276621809076 39.0 36.0 41.0 33.0 41.0 15 37.76319155452269 40.0 36.0 41.0 33.0 41.0 16 37.77131636311229 40.0 36.0 41.0 33.0 41.0 17 37.688771190257434 39.0 35.0 41.0 33.0 41.0 18 37.56752958979625 39.0 36.0 41.0 33.0 41.0 19 37.50970112954656 39.0 36.0 41.0 33.0 41.0 20 37.529896052892326 39.0 35.0 41.0 33.0 41.0 21 37.46657298816408 39.0 35.0 41.0 33.0 41.0 22 37.47084256607037 39.0 35.0 41.0 33.0 41.0 23 37.43654182204688 39.0 35.0 41.0 33.0 41.0 24 37.39487290349313 39.0 35.0 41.0 33.0 41.0 25 37.34434055738709 39.0 35.0 41.0 33.0 41.0 26 37.17035075393179 39.0 35.0 41.0 33.0 41.0 27 37.07719468914951 39.0 35.0 41.0 32.0 41.0 28 37.09596641985984 39.0 35.0 41.0 32.0 41.0 29 37.10230773388099 39.0 35.0 41.0 33.0 41.0 30 37.02940063773442 39.0 35.0 41.0 32.0 41.0 31 36.78371074960817 39.0 35.0 40.0 32.0 41.0 32 36.672971950494514 38.0 35.0 40.0 31.0 41.0 33 36.565980291484266 38.0 35.0 40.0 31.0 41.0 34 36.39181033706246 38.0 35.0 40.0 30.0 41.0 35 36.34486299518997 38.0 35.0 40.0 30.0 41.0 36 36.05287430867067 38.0 35.0 40.0 30.0 41.0 37 35.97312147579672 38.0 35.0 40.0 30.0 41.0 38 35.881730890486224 38.0 35.0 40.0 30.0 41.0 39 35.93793799203733 38.0 35.0 40.0 30.0 41.0 40 35.79855518924859 38.0 35.0 40.0 29.0 41.0 41 35.76097569763462 38.0 35.0 40.0 29.0 41.0 42 35.6455529733917 38.0 35.0 40.0 29.0 41.0 43 35.60323551135852 38.0 35.0 40.0 29.0 41.0 44 35.37246212325929 38.0 34.0 40.0 28.0 41.0 45 35.27872957538417 38.0 34.0 40.0 27.0 41.0 46 35.16267632275847 38.0 34.0 40.0 27.0 41.0 47 34.988488353240015 37.0 34.0 40.0 26.0 41.0 48 34.86757102451855 37.0 34.0 40.0 26.0 41.0 49 34.715757805040624 37.0 34.0 40.0 24.0 41.0 50 34.447476985714026 37.0 34.0 40.0 24.0 41.0 51 32.11281053522852 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 6.0 11 3.0 12 3.0 13 0.0 14 1.0 15 2.0 16 1.0 17 11.0 18 20.0 19 32.0 20 61.0 21 84.0 22 120.0 23 238.0 24 341.0 25 462.0 26 628.0 27 696.0 28 810.0 29 1013.0 30 1177.0 31 1574.0 32 2096.0 33 2996.0 34 5012.0 35 6438.0 36 5059.0 37 7648.0 38 9503.0 39 9464.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.901475436415716 18.791547316651354 24.075375164387758 16.231602082545173 2 29.771748725431912 26.660541533805326 26.557855482894666 17.009854257868092 3 29.597002287917274 24.98153452593273 29.43666792772343 15.984795258426562 4 27.301878974580703 25.04098434488101 29.917671008304957 17.739465672233333 5 26.002990506044064 27.71082166855825 27.415374083481957 18.870813741915725 6 24.73833072114432 34.72770181412023 26.864112125961555 13.669855338773893 7 58.260822569313085 27.797294132483017 9.394872903493127 4.547010394710767 8 78.03058963411338 6.105316255021708 10.587472301788898 5.276621809076006 9 72.50175647192347 7.377182078581851 11.808895854726261 8.312165594768416 10 45.976328163000595 22.66839611594516 18.328559332720822 13.026716388333423 11 37.055252301428595 20.479561872849448 25.0698084995226 17.395377326199355 12 32.771262317822334 21.011007224053756 27.88736961573799 18.33036084238592 13 22.2774685186186 31.074240213298744 30.825631879515036 15.82265938856762 14 16.51984362896107 33.92963303248122 30.389666540560988 19.160856797996722 15 15.096650993532581 22.944027094705362 44.03069772469329 17.928624187068763 16 17.723252085247438 23.003476913653643 37.896557315029995 21.376713686068925 17 18.537534453872347 22.302689653929995 30.238339728692644 28.921436163505014 18 20.603866039741302 24.54556918697869 33.4270118359185 21.42355293736151 19 23.662829451080007 25.804824442883135 28.49267686321137 22.03966924282549 20 26.112882595615126 25.332828910627104 28.759300293646074 19.794988200111693 21 21.481201246644687 27.476625412095334 30.6346718550145 20.407501486245476 22 20.454340737538057 23.70786719270749 28.54852366282945 27.289268406925004 23 18.656434091768904 27.35051973553838 29.05294636905727 24.940099803635444 24 21.926174133924228 22.05588282981138 33.72786394999009 22.290079086274297 25 17.872777387450682 26.62811435983354 32.054261471112795 23.444846781602983 26 16.842313859013856 30.49415410113675 29.83660307337549 22.826928966473904 27 20.052604082220903 29.94649516294655 28.52510403718316 21.47579671764939 28 16.004611864742653 26.658740024140233 35.77257741987786 21.56407069123926 29 19.032949611774665 24.687888450521537 33.76029112396188 22.518870813741916 30 21.347889531427334 26.89834080959844 31.339062134068353 20.41470752490587 31 24.35460916247816 25.936334648435388 29.10519014934515 20.603866039741302 32 27.90718622205408 27.77207299717163 25.439117980867966 18.88162279990632 33 25.215730782395646 26.105676556954727 25.370660613594193 23.30793204705543 34 19.948116521645137 27.202795943000236 30.632870345349406 22.216217190005224 35 22.958439172026157 26.07685240231314 28.14858851717739 22.81611990848331 36 24.107802338359548 27.595525049991892 29.144823361977334 19.151849249671223 37 24.29335783386478 26.145309769586916 31.737195770055305 17.824136626493 38 20.8921075861572 28.065719072582823 26.864112125961555 24.17806121529842 39 21.508223891621178 27.195589904339833 30.191500477400062 21.104685726638923 40 23.72948530868868 24.138428002666235 28.701651984362897 23.430434704282188 41 20.076023707867193 26.1795384532238 28.121565872200904 25.6228719667081 42 23.56374641949954 24.001513268118682 29.49431623700661 22.940424075375166 43 24.949107351960944 24.338395575492264 26.91635590624944 23.796141166297357 44 20.53180565313733 25.981372390062873 28.9628708858023 24.523951070997498 45 20.793024554576736 28.422417986272496 26.70557927543281 24.078978183717954 46 25.599452341061813 27.152353672377455 26.70557927543281 20.542614711127925 47 20.659712839359383 25.529193464122933 31.025599452341062 22.785494244176622 48 22.81792141814841 22.481039110774827 30.600443171377616 24.10059629969915 49 21.066854023671837 21.380316705399125 33.75308508530148 23.799744185627556 50 20.020176908249113 24.58700390927597 31.54083121655948 23.851987965915438 51 19.97153614729143 25.750779152930154 26.961393647876918 27.31629105190149 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 18.0 1 80.5 2 143.0 3 317.5 4 492.0 5 358.5 6 225.0 7 208.0 8 191.0 9 174.5 10 158.0 11 166.5 12 175.0 13 164.5 14 154.0 15 147.0 16 140.0 17 155.0 18 170.0 19 181.0 20 192.0 21 186.0 22 180.0 23 226.5 24 273.0 25 300.5 26 368.5 27 409.0 28 485.0 29 561.0 30 677.0 31 793.0 32 903.5 33 1014.0 34 1190.5 35 1367.0 36 1519.0 37 1671.0 38 1854.5 39 2038.0 40 2552.5 41 3067.0 42 3638.5 43 4210.0 44 4761.0 45 5312.0 46 6023.0 47 6734.0 48 6307.0 49 5880.0 50 5368.5 51 4857.0 52 4157.5 53 3458.0 54 3037.5 55 2617.0 56 2296.5 57 1976.0 58 1811.0 59 1646.0 60 1545.0 61 1444.0 62 1350.0 63 1256.0 64 1041.0 65 826.0 66 708.5 67 591.0 68 456.5 69 322.0 70 290.0 71 258.0 72 191.0 73 124.0 74 114.0 75 84.5 76 65.0 77 48.5 78 32.0 79 25.0 80 18.0 81 15.5 82 13.0 83 7.5 84 2.0 85 2.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 55509.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.31239979102487 #Duplication Level Percentage of deduplicated Percentage of total 1 72.52747252747253 37.21558666162244 2 10.392163746796335 10.664937217388172 3 5.073201558824562 7.809544398205697 4 3.163290383737668 6.492640833018069 5 2.3838781027279428 6.116125313012304 6 1.6711722782010323 5.145111603523753 7 1.3271073973949374 4.766794573852889 8 1.035705508548959 4.251562809634474 9 0.7127058245269108 3.2913581581365183 >10 1.667661412070358 10.933362157487975 >50 0.02457606291472106 0.9566016321677566 >100 0.021065196784046624 2.356374641949954 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCG 356 0.6413374407753697 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGC 245 0.4413698679493415 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 241 0.4341638292889441 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTC 230 0.41434722297285126 No Hit GCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 135 0.2432038047884127 No Hit CCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 101 0.18195247617503468 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCT 100 0.1801509665099353 No Hit CTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGCT 85 0.15312832153344502 Illumina Single End Adapter 1 (95% over 21bp) GAATGAAACCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCG 81 0.14592228287304762 No Hit GAATCTATCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTC 81 0.14592228287304762 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 66 0.11889963789655732 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGC 63 0.11349510890125926 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20176908249112757 0.0 2 0.0 0.0 0.0 1.0394710767623268 0.0 3 0.0 0.0 0.0 1.4267956547586877 0.0 4 0.0 0.0 0.0 1.9041957160100165 0.0 5 0.0 0.0 0.0 3.6336449945053957 0.0 6 0.0 0.0 0.0 4.255165828964673 0.0 7 0.0 0.0 0.0 5.154119151849249 0.0 8 0.0 0.0 0.0 6.523266497324758 0.0 9 0.0 0.0 0.0 7.0186816552270805 0.0 10 0.0 0.0 0.0 8.9102668035814 0.0 11 0.0 0.0 0.0 10.347871516330684 0.0 12 0.0 0.0 0.0 12.098938910807256 0.0 13 0.0 0.0 0.0 12.574537462393486 0.0 14 0.0 0.0 0.0 12.805130699526202 0.0 15 0.0 0.0 0.0 13.28613378010773 0.0 16 0.0 0.0 0.0 14.086004071411843 0.0 17 0.0 0.0 0.0 14.907492478697149 0.0 18 0.0 0.0 0.0 15.916337891152786 0.0 19 0.0 0.0 0.0 16.509034570970474 0.0 20 0.0 0.0 0.0 17.072907096146572 0.0 21 0.0 0.0 0.0 17.789907942856114 0.0 22 0.0 0.0 0.0 18.49249671224486 0.0 23 0.0 0.0 0.0 19.294168513214075 0.0 24 0.0 0.0 0.0 19.753553477814407 0.0 25 0.0 0.0 0.0 20.202129384424147 0.0 26 0.0 0.0 0.0 20.708353600317064 0.0 27 0.0 0.0 0.0 21.129906861950314 0.0 28 0.0 0.0 0.0 21.574879749229854 0.0 29 0.0 0.0 0.0 21.987425462537608 0.0 30 0.0 0.0 0.0 22.545893458718407 0.0 31 0.0 0.0 0.0 23.075537300257615 0.0 32 0.0 0.0 0.0 23.56374641949954 0.0 33 0.0 0.0 0.0 23.97629213280729 0.0 34 0.0 0.0 0.0 24.500531445351204 0.0 35 0.0 0.0 0.0 25.022969248230016 0.0 36 0.0 0.0 0.0 25.507575348141742 0.0 37 0.0 0.0 0.0 25.912915022789097 0.0 38 0.0 0.0 0.0 26.341674323082742 0.0 39 0.0 0.0 0.0 26.806463816678377 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGGGAT 20 6.975348E-4 45.000004 5 TTCGTGT 20 6.975348E-4 45.000004 25 GCGATGA 20 6.975348E-4 45.000004 9 AACTGGG 20 6.975348E-4 45.000004 3 TGCCGGC 20 6.975348E-4 45.000004 24 AGGATCA 20 6.975348E-4 45.000004 7 TATGCGG 20 6.975348E-4 45.000004 2 GTCCGGG 20 6.975348E-4 45.000004 3 GCGGCTA 20 6.975348E-4 45.000004 24 TGTCACT 20 6.975348E-4 45.000004 3 CGTAGCC 20 6.975348E-4 45.000004 16 GAGTTCT 20 6.975348E-4 45.000004 9 CCGTAGC 20 6.975348E-4 45.000004 15 CGGCGCA 20 6.975348E-4 45.000004 22 TGCTTGG 20 6.975348E-4 45.000004 2 TTCTTCT 20 6.975348E-4 45.000004 36 CTGGAAC 20 6.975348E-4 45.000004 35 TGGATAG 20 6.975348E-4 45.000004 1 CTTCGTG 20 6.975348E-4 45.000004 24 TCACTTA 20 6.975348E-4 45.000004 5 >>END_MODULE