SRR2936545.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936545.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	109155
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	227	0.20796115615409283	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	115	0.10535477073885759	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCGGTC	30	2.1474298E-6	45.000004	36
CGAATAT	35	1.1984594E-7	45.000004	14
TTCGGCG	30	2.1474298E-6	45.000004	33
GCTACGA	35	1.1984594E-7	45.000004	10
TCCGGTT	30	2.1474298E-6	45.000004	28
TATGCTT	25	3.8675706E-5	45.0	37
TATGCGG	20	7.005232E-4	45.0	2
ACCTATG	25	3.8675706E-5	45.0	34
TCGAGGG	25	3.8675706E-5	45.0	3
CGTTTTA	20	7.005232E-4	45.0	1
GGACCGA	55	6.002665E-11	40.909092	8
GACCGAT	45	1.9010258E-8	40.0	9
AGGCGAT	45	1.9010258E-8	40.0	7
GGCGATA	45	1.9010258E-8	40.0	8
CGACCAC	40	3.4200275E-7	39.375	20
GTAGGGT	40	3.4200275E-7	39.375	4
TACGAAT	40	3.4200275E-7	39.375	12
AGCTACG	40	3.4200275E-7	39.375	9
CGGCGGT	35	6.196484E-6	38.57143	35
GAAGACC	35	6.196484E-6	38.57143	30