##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936543.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 269387 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.901283283900113 33.0 31.0 34.0 30.0 34.0 2 32.00936199593893 33.0 31.0 34.0 30.0 34.0 3 31.433027577425786 33.0 31.0 34.0 28.0 34.0 4 35.431657800858986 37.0 35.0 37.0 33.0 37.0 5 35.69018920734854 37.0 35.0 37.0 35.0 37.0 6 35.71102168998504 37.0 35.0 37.0 35.0 37.0 7 26.99333301161526 35.0 16.0 37.0 0.0 37.0 8 31.263735815017057 36.0 23.0 37.0 17.0 37.0 9 36.038903139349706 39.0 32.0 39.0 32.0 39.0 10 36.71199055633716 38.0 35.0 39.0 33.0 39.0 11 37.083890462420236 39.0 37.0 39.0 34.0 39.0 12 37.15650718111861 39.0 37.0 39.0 34.0 39.0 13 37.15492210091801 39.0 37.0 39.0 34.0 39.0 14 38.320757868791 40.0 38.0 41.0 34.0 41.0 15 38.39952930171092 40.0 38.0 41.0 34.0 41.0 16 38.345436119783066 40.0 38.0 41.0 34.0 41.0 17 38.261683006232666 40.0 37.0 41.0 33.0 41.0 18 38.07874916013022 40.0 37.0 41.0 33.0 41.0 19 37.859016953305094 40.0 37.0 41.0 33.0 41.0 20 37.77825581783828 40.0 35.0 41.0 33.0 41.0 21 37.734382134252954 40.0 35.0 41.0 33.0 41.0 22 37.76001440307068 39.0 35.0 41.0 33.0 41.0 23 37.68848162680456 39.0 35.0 41.0 33.0 41.0 24 37.609866103412564 39.0 35.0 41.0 33.0 41.0 25 37.50683589037333 39.0 35.0 41.0 33.0 41.0 26 37.40869455467413 39.0 35.0 41.0 33.0 41.0 27 37.302457059917515 39.0 35.0 41.0 33.0 41.0 28 37.2602983811394 39.0 35.0 41.0 33.0 41.0 29 37.22031129935743 39.0 35.0 41.0 33.0 41.0 30 37.0985905036249 39.0 35.0 41.0 32.0 41.0 31 36.86847917679769 39.0 35.0 41.0 31.0 41.0 32 36.62560554147008 39.0 35.0 41.0 31.0 41.0 33 36.35237780590749 39.0 35.0 41.0 30.0 41.0 34 35.97968721578992 39.0 35.0 41.0 28.0 41.0 35 35.67348832720213 39.0 35.0 41.0 26.0 41.0 36 35.384610244740834 39.0 35.0 41.0 24.0 41.0 37 35.19903707305846 39.0 35.0 40.0 23.0 41.0 38 34.974828035502824 38.0 34.0 40.0 23.0 41.0 39 34.899185929536316 38.0 34.0 40.0 22.0 41.0 40 34.68856700583176 38.0 34.0 40.0 21.0 41.0 41 34.53846696388467 38.0 34.0 40.0 20.0 41.0 42 34.39096912620134 38.0 34.0 40.0 20.0 41.0 43 34.34790839944021 38.0 34.0 40.0 20.0 41.0 44 34.11760775390052 38.0 33.0 40.0 18.0 41.0 45 34.03382494329719 38.0 33.0 40.0 18.0 41.0 46 33.89104893703111 38.0 33.0 40.0 18.0 41.0 47 33.691128376647725 38.0 33.0 40.0 18.0 41.0 48 33.56334938211569 37.0 33.0 40.0 15.0 41.0 49 33.40992327023947 37.0 32.0 40.0 15.0 41.0 50 33.20975770916934 37.0 32.0 40.0 15.0 41.0 51 31.215841892890154 35.0 28.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 11.0 10 26.0 11 9.0 12 10.0 13 9.0 14 14.0 15 17.0 16 33.0 17 62.0 18 124.0 19 203.0 20 372.0 21 620.0 22 1147.0 23 1735.0 24 2779.0 25 4271.0 26 5579.0 27 6184.0 28 5691.0 29 5861.0 30 6232.0 31 7252.0 32 8849.0 33 11790.0 34 17628.0 35 20775.0 36 23776.0 37 38076.0 38 47723.0 39 52507.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.592062720175804 17.84607275035544 22.388979423654444 21.172885105814313 2 35.765645706734176 23.622149546934338 24.98041850571854 15.631786240612946 3 29.701878709811535 23.143655781459387 32.376098326942284 14.778367181786797 4 26.057307887908475 24.039764353884934 32.89542554020795 17.007502217998642 5 24.110666067776098 27.90335094121097 30.870086529787997 17.11589646122493 6 23.737225627071833 33.27554781782343 29.837742727006127 13.14948382809861 7 57.54472190565989 27.083341066940868 11.881419667615734 3.4905173597835084 8 79.28927528054435 4.53251270477046 13.12052920148337 3.057682813201825 9 74.06036668436116 5.923448421787243 14.809549087372442 5.206635806479155 10 38.12433413639114 23.556444817307444 23.30513350681362 15.0140875394878 11 28.913421954288808 25.17122207084974 28.841035387750708 17.074320587110737 12 25.54948828265655 22.947284018902174 32.14334767453515 19.35988002390613 13 23.17186798175116 22.3347823020413 34.97273439327065 19.52061532293689 14 20.083374476125428 25.359427143848812 35.02247695694298 19.534721423082775 15 20.482057411827594 24.769569429853703 36.6933073979071 18.0550657604116 16 23.873089644266425 24.562061272444478 33.478230204130114 18.08661887915898 17 24.506379298184395 24.16077984461017 32.503424441416996 18.82941641578844 18 24.17117381313872 24.468515555687542 32.88874370329675 18.471566927876996 19 23.450277853051556 25.884322554540496 31.85825596632354 18.807143626084407 20 23.793278814493647 26.648279241388785 32.14520374034382 17.413238203773755 21 23.462527887388777 26.149739965180206 32.83380415536013 17.553927992070886 22 23.295481964608538 23.232004513952045 33.680912590436805 19.79160093100261 23 21.8184247940695 25.070252090858137 33.741420335799425 19.36990277927294 24 21.96765248508651 25.016426182406725 33.07472149732541 19.941199835181354 25 21.782417117381314 26.99499233444821 31.697891880454517 19.524698667715963 26 21.327680994257335 26.573665395880276 31.562027863259917 20.53662574660247 27 21.52739367527015 25.985663747693838 32.91101649300078 19.575926084035235 28 20.463496753740902 26.250709945171817 32.98822883064142 20.297564470445863 29 21.81285659664349 25.324161893484092 32.99268338858223 19.87029812129019 30 23.317383541150836 24.811145303967898 32.63186419537691 19.239606959504357 31 23.04491308043818 25.43329856303385 31.697891880454517 19.823896476073454 32 23.91652158418929 25.677556823454733 31.474792770252463 18.931128822103517 33 23.316641114827366 26.13080809393178 31.318512029162505 19.23403876207835 34 22.54785865687654 26.16421727848783 32.21313574894111 19.074788315694523 35 22.438350774165052 26.898476912397406 31.535300515615084 19.12787179782246 36 24.308522682980247 27.1735458652422 29.741969731278793 18.775961720498763 37 22.696715134731818 27.786790008426536 30.614691874515103 18.90180298232654 38 22.34517627056985 27.92822222304714 29.821038134728106 19.905563371654907 39 23.012246322205602 26.562900214189995 29.856674598254557 20.56817886534985 40 23.329633575488053 25.903625638950658 30.726798249358726 20.039942536202563 41 22.340721712629044 26.606332154112856 30.090910103308623 20.962036029949477 42 22.37710060247896 26.5662411326456 30.795472684279495 20.261185580595946 43 22.702654545319557 25.973784926518356 30.249418123368983 21.074142404793104 44 22.43389621622424 26.611529138377133 29.770553144732297 21.18402150066633 45 22.097948304855098 25.700200826320497 29.731575762750246 22.470275106074162 46 22.427585592474767 26.570695690586405 29.13021044074139 21.871508276197442 47 21.30132485977423 26.594453332937373 30.92205637243074 21.18216543485766 48 21.995493472216552 26.428149836480603 30.22825897315015 21.348097718152694 49 22.15771362389425 25.704284171099573 30.602813053339617 21.53518915166656 50 20.94978599561226 26.412930096849514 30.847071313760498 21.790212593777724 51 21.124256181627178 26.142686915107262 30.04525088441536 22.687806018850203 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 63.0 1 186.0 2 309.0 3 3948.0 4 7587.0 5 5270.5 6 2954.0 7 2561.5 8 2169.0 9 2102.5 10 2036.0 11 1938.5 12 1841.0 13 1794.5 14 1748.0 15 1658.0 16 1568.0 17 1514.0 18 1460.0 19 1411.0 20 1362.0 21 1388.5 22 1415.0 23 1504.0 24 1593.0 25 1738.0 26 2145.5 27 2408.0 28 2929.0 29 3450.0 30 4143.0 31 4836.0 32 5420.5 33 6005.0 34 6869.0 35 7733.0 36 8620.5 37 9508.0 38 10329.0 39 11150.0 40 11988.5 41 12827.0 42 13747.0 43 14667.0 44 15880.5 45 17094.0 46 19591.5 47 22089.0 48 21616.5 49 21144.0 50 20918.5 51 20693.0 52 19215.0 53 17737.0 54 16371.5 55 15006.0 56 13986.0 57 12966.0 58 11819.0 59 10672.0 60 9997.0 61 9322.0 62 8351.5 63 7381.0 64 6349.0 65 5317.0 66 4431.0 67 3545.0 68 2872.0 69 2199.0 70 1801.5 71 1404.0 72 1145.5 73 887.0 74 726.0 75 470.0 76 375.0 77 291.0 78 207.0 79 149.0 80 91.0 81 75.0 82 59.0 83 45.5 84 32.0 85 22.5 86 13.0 87 12.5 88 12.0 89 7.5 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 269387.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.49644617436685 #Duplication Level Percentage of deduplicated Percentage of total 1 72.26447188800512 40.82685846339728 2 11.885016273003664 13.429223642984514 3 5.982536787223391 10.139762027566077 4 3.5817530839302956 8.094252812645616 5 2.2463843267881547 6.345636560266415 6 1.4548156971161033 4.931515003544635 7 0.9494227091865345 3.754730629039502 8 0.5938438356789989 2.684005303873449 9 0.40411313670737964 2.0547860468708725 >10 0.6153864462767545 4.395352930827412 >50 0.013091656519758656 0.52550858424426 >100 0.00720041108586726 0.9001322266365438 >500 0.0013091656519758654 0.48150047620410025 >1k 6.545828259879327E-4 1.4367352918993315 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3885 1.4421631333360556 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 682 0.2531673763024942 No Hit GAATCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCGTCTTC 620 0.23015216027499472 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGCCG 444 0.16481864380983494 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGATAGTGTCGTATGC 440 0.16333379116289945 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 350 0.12992460660685184 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06013653220088572 0.0 2 0.0 0.0 0.0 0.24685675255301853 0.0 3 0.0 0.0 0.0 0.3890313934970878 0.0 4 0.0 0.0 0.0 0.6091607984052683 0.0 5 0.0 0.0 0.0 1.3267158400368244 0.0 6 0.0 0.0 0.0 1.8972704696217708 0.0 7 0.0 0.0 0.0 2.349779313775349 0.0 8 0.0 0.0 0.0 3.05434189474622 0.0 9 0.0 0.0 0.0 3.523926544339556 0.0 10 0.0 0.0 0.0 4.371406192577964 0.0 11 0.0 0.0 0.0 4.980566990983232 0.0 12 0.0 0.0 0.0 5.680675014013297 0.0 13 0.0 0.0 0.0 5.97504705126825 0.0 14 0.0 0.0 0.0 6.171047600663729 0.0 15 0.0 0.0 0.0 6.348116278810782 0.0 16 0.0 0.0 0.0 6.6061094262158155 0.0 17 0.0 0.0 0.0 6.872640476340729 0.0 18 0.0 0.0 0.0 7.168126153080884 0.0 19 0.0 0.0 0.0 7.406445002914023 0.0 20 0.0 0.0 0.0 7.641422934291558 0.0 21 0.0 0.0 0.0 7.915378247651149 0.0 22 0.0 0.0 0.0 8.195644184760216 0.0 23 0.0 0.0 0.0 8.491129861500369 0.0 24 0.0 0.0 0.0 8.734645695597782 0.0 25 0.0 0.0 0.0 8.979275169180399 0.0 26 0.0 0.0 0.0 9.204972771514587 0.0 27 0.0 0.0 0.0 9.467791690022162 0.0 28 0.0 0.0 0.0 9.703140834561431 0.0 29 0.0 0.0 0.0 9.967073392554207 0.0 30 0.0 0.0 0.0 10.28260458002799 0.0 31 0.0 0.0 0.0 10.559900811843185 0.0 32 0.0 0.0 0.0 10.858727407038945 0.0 33 0.0 0.0 0.0 11.116349341282245 0.0 34 0.0 0.0 0.0 11.403668328464255 0.0 35 0.0 0.0 0.0 11.680222133955981 0.0 36 0.0 0.0 0.0 11.950465315698233 0.0 37 0.0 0.0 0.0 12.254117681996533 0.0 38 0.0 0.0 0.0 12.601944414541162 0.0 39 3.712131617338624E-4 0.0 0.0 13.135377727952722 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGGATC 40 6.7811925E-9 45.0 6 CGAAGGA 50 2.1827873E-11 45.0 4 CGTTTTT 1750 0.0 43.585716 1 CGTTTTA 300 0.0 42.000004 1 CCGGGAT 55 6.002665E-11 40.90909 5 AGGCACC 50 1.0750227E-9 40.5 7 CGGTTTT 125 0.0 39.600002 1 CACGGGC 40 3.4450932E-7 39.375 4 AATACGG 35 6.2304916E-6 38.57143 2 CGGGCTC 65 9.094947E-12 38.07692 6 CACGGGT 30 1.1376027E-4 37.500004 4 TAACGTC 30 1.1376027E-4 37.500004 32 TACCTGG 30 1.1376027E-4 37.500004 10 TGGGCGA 90 0.0 37.500004 6 CGTTTCA 30 1.1376027E-4 37.500004 1 TACACGG 30 1.1376027E-4 37.500004 2 CTCGTAA 55 2.732122E-9 36.81818 33 CGTAACC 55 2.732122E-9 36.81818 35 TAGCTCG 55 2.732122E-9 36.81818 30 GTAAGGC 80 0.0 36.5625 4 >>END_MODULE