##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936540.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 73941 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07986097023302 33.0 31.0 34.0 30.0 34.0 2 32.1930728553847 33.0 31.0 34.0 30.0 34.0 3 32.09657700058155 33.0 31.0 34.0 30.0 34.0 4 35.8442542026751 37.0 35.0 37.0 35.0 37.0 5 35.90198942400021 37.0 35.0 37.0 35.0 37.0 6 35.872844565261495 37.0 35.0 37.0 35.0 37.0 7 26.762080577757942 36.0 10.0 37.0 0.0 37.0 8 31.177181807116483 36.0 19.0 37.0 17.0 37.0 9 36.032336592688765 39.0 32.0 39.0 32.0 39.0 10 36.84487632030944 38.0 37.0 39.0 34.0 39.0 11 37.1458595366576 39.0 37.0 39.0 34.0 39.0 12 37.04492771263575 39.0 35.0 39.0 34.0 39.0 13 36.86015877523972 39.0 35.0 39.0 33.0 39.0 14 37.98408190313899 40.0 37.0 41.0 33.0 41.0 15 38.167944712676324 40.0 37.0 41.0 33.0 41.0 16 38.14729311207584 40.0 36.0 41.0 34.0 41.0 17 38.078846648003136 40.0 36.0 41.0 34.0 41.0 18 37.985217944036464 40.0 36.0 41.0 34.0 41.0 19 37.83148726687494 40.0 36.0 41.0 33.0 41.0 20 37.8736965959346 40.0 36.0 41.0 34.0 41.0 21 37.82844430018528 40.0 36.0 41.0 33.0 41.0 22 37.81893671981715 40.0 35.0 41.0 33.0 41.0 23 37.76818003543366 40.0 35.0 41.0 33.0 41.0 24 37.70245195493705 40.0 35.0 41.0 33.0 41.0 25 37.62072463180103 39.0 35.0 41.0 33.0 41.0 26 37.45632328478111 39.0 35.0 41.0 33.0 41.0 27 37.34986002353227 39.0 35.0 41.0 33.0 41.0 28 37.34754736884813 39.0 35.0 41.0 33.0 41.0 29 37.34394990600614 39.0 35.0 41.0 33.0 41.0 30 37.30485116511814 39.0 35.0 41.0 33.0 41.0 31 37.177087137041696 39.0 35.0 41.0 33.0 41.0 32 37.02836044954761 39.0 35.0 41.0 32.0 41.0 33 36.94026318280791 39.0 35.0 41.0 32.0 41.0 34 36.79297007073207 39.0 35.0 41.0 31.0 41.0 35 36.70875427705874 39.0 35.0 41.0 31.0 41.0 36 36.53675227546287 39.0 35.0 41.0 31.0 41.0 37 36.44785707523566 39.0 35.0 41.0 30.0 41.0 38 36.38272406378058 39.0 35.0 41.0 30.0 41.0 39 36.36576459609689 39.0 35.0 41.0 30.0 41.0 40 36.196589172448306 39.0 35.0 40.0 30.0 41.0 41 36.1378937260789 38.0 35.0 40.0 30.0 41.0 42 36.10918164482493 38.0 35.0 40.0 30.0 41.0 43 36.014186986922006 38.0 35.0 40.0 30.0 41.0 44 35.86057802842807 38.0 35.0 40.0 29.0 41.0 45 35.74183470604942 38.0 35.0 40.0 29.0 41.0 46 35.648178953489946 38.0 35.0 40.0 29.0 41.0 47 35.54377138529368 38.0 35.0 40.0 28.0 41.0 48 35.49206800016229 38.0 35.0 40.0 28.0 41.0 49 35.371241936138276 38.0 34.0 40.0 28.0 41.0 50 35.11373933271121 37.0 34.0 40.0 27.0 41.0 51 32.99981065985042 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 7.0 10 4.0 11 5.0 12 1.0 13 2.0 14 2.0 15 3.0 16 6.0 17 7.0 18 24.0 19 33.0 20 65.0 21 105.0 22 177.0 23 301.0 24 435.0 25 539.0 26 754.0 27 833.0 28 899.0 29 1094.0 30 1324.0 31 1750.0 32 2308.0 33 3524.0 34 5900.0 35 7673.0 36 6617.0 37 10512.0 38 13847.0 39 15185.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.23852801557999 18.518819058438485 23.437605658565612 14.805047267415913 2 30.05098659742227 26.941750855411744 26.366968258476355 16.64029428868963 3 31.123463301821726 24.08000973749341 28.161642390554633 16.63488457013024 4 29.209775361436822 26.333157517480153 26.24254473161034 18.214522389472688 5 27.032363641281563 29.54112062319958 24.437051162413276 18.989464573105586 6 27.24604752437754 35.52426934988707 23.272609242504156 13.957073883231224 7 59.604279087380476 28.737777417129873 7.059682720006491 4.598260775483156 8 80.69271446153013 7.0569778607267954 8.31068013686588 3.939627540877186 9 75.1369335010346 9.003124112468049 9.898432534047416 5.961509852449926 10 46.61013510772102 25.932838344085145 15.527244695094739 11.929781853099094 11 38.01950203540661 24.576351415317617 22.51930593310883 14.884840616166944 12 35.425541986178175 22.738399534764202 25.513585155732272 16.322473323325354 13 25.851692565694268 29.593865379153648 26.08160560446843 18.47283645068365 14 17.915635439066282 33.300875021976985 27.393462355120974 21.390027183835763 15 18.56074437727377 27.2392853761783 36.622442217443634 17.577528029104286 16 20.78549113482371 24.069190300374625 35.25243099227763 19.89288757252404 17 20.600208274164537 23.87579286187636 29.888695040640513 25.63530382331859 18 23.295600546381575 26.062671589510554 28.74318713568926 21.898540728418602 19 27.594974371458324 25.908494610567885 25.862512002813055 20.63401901516074 20 29.03666436753628 25.370227613908387 26.583357000852033 19.009751017703305 21 24.84548491364737 27.623375393895135 26.57659485265279 20.954544839804708 22 23.192815893753128 26.580652141572337 25.393218917785802 24.833313046888737 23 22.3069744796527 27.958777944577434 27.006667478124452 22.72758009764542 24 23.631003097063875 24.318037354106654 30.90166484088665 21.14929470794282 25 21.05462463315346 26.672617357081997 29.386943644256906 22.885814365507635 26 19.73871059358137 30.424257178020316 27.72075032796419 22.116281900434128 27 20.915324380249118 31.063956397668413 28.979862322662665 19.040856899419808 28 19.00028401022437 28.344220391934112 33.20620494718762 19.4492906506539 29 20.18230751545151 26.151931945740525 32.55703872006059 21.10872181874738 30 21.41707577663272 28.038571293328463 29.005558485819776 21.53879444421904 31 24.28422661311045 27.32313601384888 27.225761079779826 21.16687629326084 32 27.36235647340447 27.80054367671522 26.450818896146927 18.386280953733383 33 25.287729405877656 28.8540863661568 24.685898216145304 21.172286011820233 34 21.31699598328397 28.956871018785247 28.240083309665813 21.48604968826497 35 23.618831230305243 26.809212750706646 27.501656726308816 22.070299292679298 36 24.63721074911078 27.17031146454606 28.234673591106425 19.957804195236744 37 22.857413343070824 29.85894158856385 29.017730352578408 18.26591471578691 38 21.46305838438755 29.00285362654008 26.75782042439242 22.776267564679948 39 23.176586738074953 27.231170798339217 28.010170270891656 21.582072192694174 40 23.87444043223651 25.70698259423054 28.62552575702249 21.793051216510463 41 19.558837451481587 27.271743687534656 28.514626526554952 24.6547923344288 42 23.378098754412303 25.900380032728798 27.286620413572983 23.43490079928592 43 24.08406702641295 26.556308408055067 27.6139083864162 21.74571617911578 44 22.089233307637173 28.234673591106425 27.18113090166484 22.494962199591566 45 20.55828295532925 30.494583519292405 25.651532978996766 23.295600546381575 46 21.738954030916542 29.574931364195777 26.724009683396222 21.96210492149146 47 22.315089057491782 27.02830635236202 28.958223448425098 21.6983811417211 48 22.86958520982946 24.726471105340746 29.54112062319958 22.86282306163022 49 21.691618993521864 25.46219282941805 29.013673063658864 23.832515113401225 50 20.325665057275398 27.60444137893726 29.058303241773846 23.011590322013497 51 20.63266658552089 28.601182023505228 25.793538091180807 24.97261329979308 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 41.0 1 106.5 2 172.0 3 292.5 4 413.0 5 335.0 6 257.0 7 227.0 8 197.0 9 180.5 10 164.0 11 187.5 12 211.0 13 193.5 14 176.0 15 192.5 16 209.0 17 219.5 18 230.0 19 239.0 20 248.0 21 313.0 22 378.0 23 361.0 24 344.0 25 389.0 26 623.5 27 813.0 28 979.0 29 1145.0 30 1328.5 31 1512.0 32 1690.0 33 1868.0 34 1958.0 35 2048.0 36 2152.0 37 2256.0 38 2598.0 39 2940.0 40 3495.5 41 4051.0 42 4749.5 43 5448.0 44 5769.0 45 6090.0 46 6347.5 47 6605.0 48 6358.5 49 6112.0 50 5706.0 51 5300.0 52 4841.5 53 4383.0 54 4104.5 55 3826.0 56 3532.0 57 3238.0 58 3214.5 59 3191.0 60 3080.5 61 2970.0 62 2719.0 63 2468.0 64 1974.5 65 1481.0 66 1243.0 67 1005.0 68 823.5 69 642.0 70 558.5 71 475.0 72 380.5 73 286.0 74 222.0 75 118.0 76 78.0 77 61.5 78 45.0 79 28.5 80 12.0 81 8.5 82 5.0 83 7.0 84 9.0 85 6.5 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 73941.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.662636426339915 #Duplication Level Percentage of deduplicated Percentage of total 1 67.63565891472868 30.207868435644635 2 10.286458333333332 9.188406973127224 3 5.832122093023256 7.814338459041668 4 4.015261627906977 7.173286809753722 5 2.870639534883721 6.410516492879458 6 2.4012839147286824 6.434860226396721 7 1.6321463178294575 5.1027170311464545 8 1.3202519379844961 4.717274583789778 9 0.9629360465116279 3.8706536292449383 >10 3.0099321705426356 17.638387362897447 >50 0.02422480620155039 0.815515072828336 >100 0.009084302325581396 0.6261749232496179 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 171 0.23126546841400575 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTGCATGTCGTATGCCG 154 0.20827416453659 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 138 0.1866352902990222 No Hit CCTGTCTCTTATACACATCTGACGCTGTGCATGTCGTATGCCGTCTTCTGC 98 0.13253810470510272 RNA PCR Primer, Index 3 (95% over 23bp) AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 91 0.12307109722616683 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTGCATGTCGTATGCCGTCTTC 83 0.11225166010738293 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTGCATGTCGTATGC 83 0.11225166010738293 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12036623794647083 0.0 2 0.0 0.0 0.0 0.517980552061779 0.0 3 0.0 0.0 0.0 0.6802721088435374 0.0 4 0.0 0.0 0.0 0.8614976805831677 0.0 5 0.0 0.0 0.0 1.3930025290434265 0.0 6 0.0 0.0 0.0 1.7067662054881594 0.0 7 0.0 0.0 0.0 2.0259396004922845 0.0 8 0.0 0.0 0.0 2.6426475162629663 0.0 9 0.0 0.0 0.0 2.884732421795756 0.0 10 0.0 0.0 0.0 3.6596746054286524 0.0 11 0.0 0.0 0.0 4.34670886247143 0.0 12 0.0 0.0 0.0 5.008046956357096 0.0 13 0.0 0.0 0.0 5.251484291529733 0.0 14 0.0 0.0 0.0 5.371850529476204 0.0 15 0.0 0.0 0.0 5.6017635682503615 0.0 16 0.0 0.0 0.0 6.062942075438525 0.0 17 0.0 0.0 0.0 6.518710864067297 0.0 18 0.0 0.0 0.0 7.069149727485428 0.0 19 0.0 0.0 0.0 7.36938910753168 0.0 20 0.0 0.0 0.0 7.703439228574133 0.0 21 0.0 0.0 0.0 8.084824387011265 0.0 22 0.0 0.0 0.0 8.470266834367942 0.0 23 0.0 0.0 0.0 8.824603400008115 0.0 24 0.0 0.0 0.0 9.155948661770871 0.0 25 0.0 0.0 0.0 9.461597760376517 0.0 26 0.0 0.0 0.0 9.755074992223529 0.0 27 0.0 0.0 0.0 10.067486239028414 0.0 28 0.0 0.0 0.0 10.354201322676188 0.0 29 0.0 0.0 0.0 10.635506687764568 0.0 30 0.0 0.0 0.0 10.976318957006262 0.0 31 0.0 0.0 0.0 11.30631178912917 0.0 32 0.0 0.0 0.0 11.593026872776944 0.0 33 0.0 0.0 0.0 11.900028401022437 0.0 34 0.0 0.0 0.0 12.259774685222002 0.0 35 0.0 0.0 0.0 12.593824806264454 0.0 36 0.0 0.0 0.0 12.967095386862498 0.0 37 0.0 0.0 0.0 13.288973641146319 0.0 38 0.0 0.0 0.0 13.57704115443394 0.0 39 0.0 0.0 0.0 13.902976697637305 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGCG 20 6.9904746E-4 45.000004 5 CTATGCC 20 6.9904746E-4 45.000004 9 ACTATGC 20 6.9904746E-4 45.000004 8 AGGCGAT 40 6.666596E-9 45.000004 7 ACGGGAC 20 6.9904746E-4 45.000004 5 AATATAC 20 6.9904746E-4 45.000004 16 AACGAGG 20 6.9904746E-4 45.000004 2 AGCGACT 20 6.9904746E-4 45.000004 19 ATTGGGC 20 6.9904746E-4 45.000004 4 CTCGTGT 25 3.855364E-5 45.0 16 TTACACG 25 3.855364E-5 45.0 34 TACACGC 25 3.855364E-5 45.0 35 CGAGGGA 50 1.0531949E-9 40.5 4 GGGGTAA 40 3.4000368E-7 39.375004 7 GTACACT 30 1.1296185E-4 37.499996 18 CTGAGGG 30 1.1296185E-4 37.499996 3 TCTTACA 30 1.1296185E-4 37.499996 32 CCTGTAC 30 1.1296185E-4 37.499996 15 TGTCTTA 30 1.1296185E-4 37.499996 30 TGGGCGA 30 1.1296185E-4 37.499996 6 >>END_MODULE