SRR2936532.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936532.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	324370
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4132	1.2738539322378764	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	785	0.2420075839319296	No Hit
GAATCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCGTCTTC	779	0.24015784443690846	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGCCG	461	0.1421216512007892	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	381	0.11745845793384099	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCATGGACTGTCGTATGC	369	0.11375897894379874	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAAGGCG	45	3.8380676E-10	45.000004	5
ACACGAC	95	0.0	45.0	26
CACGACC	95	0.0	45.0	27
CGATGTA	25	3.884594E-5	45.0	10
CGTTTTT	1955	0.0	42.928387	1
TCACGGG	65	0.0	41.538464	3
GCGAGAC	105	0.0	40.714287	21
GACACGA	100	0.0	40.5	25
TAGGCGA	50	1.0768417E-9	40.5	6
ACGTGAG	80	0.0	39.375	44
CGTTTTA	350	0.0	39.214287	1
CACGGGA	75	0.0	39.0	4
CGGTTTT	145	0.0	38.793102	1
CGTCTCG	35	6.2344297E-6	38.57143	42
CGAGACA	105	0.0	38.57143	22
TCACGTC	35	6.2344297E-6	38.57143	39
ACAACGA	90	0.0	37.500004	13
CACAACG	90	0.0	37.500004	12
CGGGCAA	30	1.1381163E-4	37.499996	6
AGACACG	110	0.0	36.81818	24