##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936530.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 135349 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.997369762613687 33.0 31.0 34.0 30.0 34.0 2 32.11740020243962 33.0 31.0 34.0 30.0 34.0 3 32.034163532793 33.0 31.0 34.0 30.0 34.0 4 35.77948858137112 37.0 35.0 37.0 35.0 37.0 5 35.83473095479095 37.0 35.0 37.0 35.0 37.0 6 35.79983597957872 37.0 35.0 37.0 35.0 37.0 7 26.759946508655403 35.0 10.0 37.0 0.0 37.0 8 31.10073956955722 35.0 19.0 37.0 17.0 37.0 9 35.908562309289316 39.0 32.0 39.0 32.0 39.0 10 36.65323718682813 38.0 35.0 39.0 33.0 39.0 11 37.013890017658056 39.0 37.0 39.0 34.0 39.0 12 37.03031422470798 39.0 37.0 39.0 33.0 39.0 13 36.96772787386682 39.0 37.0 39.0 33.0 39.0 14 38.14243178745318 40.0 37.0 41.0 33.0 41.0 15 38.22681364472586 40.0 37.0 41.0 33.0 41.0 16 38.18436043118161 40.0 37.0 41.0 33.0 41.0 17 38.0850098633902 40.0 37.0 41.0 33.0 41.0 18 37.98422596398939 40.0 37.0 41.0 33.0 41.0 19 37.891598755809056 40.0 36.0 41.0 33.0 41.0 20 37.95078648530835 40.0 36.0 41.0 33.0 41.0 21 37.90436575076284 40.0 36.0 41.0 33.0 41.0 22 37.89018020081419 40.0 36.0 41.0 33.0 41.0 23 37.85093351262292 40.0 36.0 41.0 33.0 41.0 24 37.82060451130042 40.0 36.0 41.0 33.0 41.0 25 37.737094474284994 40.0 36.0 41.0 33.0 41.0 26 37.57912507665369 40.0 36.0 41.0 33.0 41.0 27 37.4622863855662 39.0 36.0 41.0 33.0 41.0 28 37.42824106568944 39.0 36.0 41.0 33.0 41.0 29 37.40128113247974 39.0 36.0 41.0 33.0 41.0 30 37.325403216868985 39.0 36.0 41.0 32.0 41.0 31 37.159565272000535 39.0 35.0 41.0 32.0 41.0 32 37.07130455341377 39.0 35.0 41.0 31.0 41.0 33 36.998980413597444 39.0 35.0 41.0 31.0 41.0 34 36.7905710422685 39.0 35.0 41.0 31.0 41.0 35 36.742074193381555 39.0 35.0 41.0 31.0 41.0 36 36.53936120695388 39.0 35.0 41.0 30.0 41.0 37 36.43228246976335 39.0 35.0 41.0 30.0 41.0 38 36.323016793622415 39.0 35.0 40.0 30.0 41.0 39 36.21726056343231 39.0 35.0 40.0 30.0 41.0 40 36.014990875440525 38.0 35.0 40.0 29.0 41.0 41 35.91468721601194 38.0 35.0 40.0 29.0 41.0 42 35.80762325543595 38.0 35.0 40.0 28.0 41.0 43 35.770216255753645 38.0 35.0 40.0 28.0 41.0 44 35.53202461783981 38.0 34.0 40.0 27.0 41.0 45 35.39859178863531 38.0 34.0 40.0 27.0 41.0 46 35.1952729610119 38.0 34.0 40.0 26.0 41.0 47 35.05650577396213 38.0 34.0 40.0 25.0 41.0 48 34.99073506268979 38.0 34.0 40.0 25.0 41.0 49 34.77934820353309 37.0 34.0 40.0 24.0 41.0 50 34.55797974126148 37.0 34.0 40.0 24.0 41.0 51 32.23791088223777 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 11.0 10 11.0 11 7.0 12 4.0 13 5.0 14 10.0 15 11.0 16 14.0 17 46.0 18 60.0 19 97.0 20 140.0 21 219.0 22 342.0 23 504.0 24 700.0 25 988.0 26 1340.0 27 1662.0 28 1949.0 29 2338.0 30 2841.0 31 3676.0 32 4739.0 33 6421.0 34 9865.0 35 12526.0 36 12920.0 37 19823.0 38 25582.0 39 26491.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.97223474129842 18.88229687696252 23.48299581082978 15.662472570909278 2 28.066701637987723 27.048592896881395 26.999091238206415 17.88561422692447 3 32.19159358399397 25.013114245395236 26.457528315687597 16.3377638549232 4 29.08407154836755 25.27613798402648 26.83654847837812 18.80324198922785 5 25.19634426556532 30.225565020798083 24.445692247449184 20.13239846618741 6 26.68656584090019 35.422500350944595 23.927771908178116 13.963161899977097 7 60.55382751257859 28.56689003982298 6.584459434498961 4.294823013099469 8 82.11512460380203 5.977879408048822 7.505042519708309 4.401953468440845 9 75.823242136994 7.5840974074429806 9.584851014784004 7.007809440779022 10 43.451373855735916 25.270966168941033 16.967247633894598 14.310412341428455 11 32.856541237837 26.37330161286748 22.881587599465085 17.88856954983044 12 30.4051008873357 23.51845968570141 27.0766684644881 18.999770962474788 13 24.716843124071843 25.904882932271388 29.0316145667866 20.346659376870164 14 19.769632579479715 29.241442493110405 28.44646063140474 22.542464296005143 15 19.273877162003412 26.204848207227244 34.66446002556354 19.856814605205802 16 21.81988784549572 25.033801505737017 31.63968703130426 21.506623617463003 17 21.779990986265137 24.674729772661784 28.70948437003598 24.8357948710371 18 23.313803574463055 26.33192709218391 28.393264819097297 21.961004514255738 19 25.182306481761962 26.77670318953225 26.113233197142204 21.927757131563588 20 26.7338510073957 25.801446630562474 27.75048208704904 19.714220274992797 21 25.547288860649136 26.662184426925943 26.887527798506085 20.902998913918832 22 23.386208985659295 25.540639384110708 26.278731279876467 24.79442035035353 23 23.05964580454972 27.190448396367906 27.007218376197827 22.74268742288454 24 23.140178353737376 24.504798705568568 28.89123672875308 23.46378621194098 25 22.11837545899859 26.96806034769374 27.742354949057624 23.17120924425005 26 21.453427805155563 28.19378052294439 27.650739938972578 22.70205173292747 27 22.818786987713242 27.842835927860566 26.91929751974525 22.419079564680935 28 20.252089043879156 27.645568123887138 29.66627016084345 22.43607267139026 29 21.680987668915176 26.069642184279157 28.68658061751472 23.562789529290946 30 21.757826064470372 26.56096461739651 27.146118552778375 24.53509076535475 31 23.61524651087189 28.51812721187449 24.678423926294247 23.188202350959372 32 24.025297564075096 27.727578334527774 25.245845924240296 23.00127817715683 33 22.21959526852803 27.143163229872403 24.372548005526454 26.264693496073114 34 20.96506069494418 28.194519353670884 27.075190803035117 23.765229148349825 35 20.772225875329703 26.845414447096026 26.488559206200268 25.893800471374 36 21.234733910113853 29.205239787512284 25.43941957458127 24.120606727792595 37 21.319699443660465 29.763056986013936 26.000930926715384 22.916312643610222 38 20.56461444118538 29.31975855011858 24.8069804727039 25.30864653599214 39 22.22033409925452 26.90821505884787 25.717958758468846 25.153492083428763 40 22.80031621955094 26.10288956697131 27.87608331055272 23.22071090292503 41 19.69574950683049 27.780035316108727 26.80403992641246 25.720175250648325 42 20.982792632379997 27.585722835041267 26.467871945858484 24.963612586720256 43 22.739732099978575 25.641120362913654 26.029006494322086 25.590141042785685 44 22.12502493553702 26.127270980945553 26.623026398421857 25.12467768509557 45 21.30196750622465 26.610466276071488 25.680278391417744 26.40728782628612 46 21.880471965068082 27.778557654655746 25.5317734153928 24.809196964883377 47 20.591212347339102 26.054865569749314 28.880893098582185 24.4730289843294 48 21.48002571130928 25.239196447701868 27.610843079741997 25.66993476124685 49 20.769270552423734 24.781860228003165 29.54879607533118 24.900073144241922 50 19.792536332000978 25.71130928193042 28.38809300401185 26.108061382056757 51 20.270559812041462 25.610089472400976 26.24917805081678 27.87017266474078 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 48.0 1 139.0 2 230.0 3 360.0 4 490.0 5 358.0 6 226.0 7 235.5 8 245.0 9 222.5 10 200.0 11 224.0 12 248.0 13 233.5 14 219.0 15 219.5 16 220.0 17 204.0 18 188.0 19 231.0 20 274.0 21 402.0 22 530.0 23 550.5 24 571.0 25 777.0 26 1097.0 27 1211.0 28 1505.5 29 1800.0 30 2154.0 31 2508.0 32 2766.5 33 3025.0 34 3268.0 35 3511.0 36 3871.0 37 4231.0 38 4543.5 39 4856.0 40 5521.5 41 6187.0 42 7112.0 43 8037.0 44 8879.0 45 9721.0 46 11045.5 47 12370.0 48 12212.5 49 12055.0 50 11744.5 51 11434.0 52 10512.0 53 9590.0 54 8804.0 55 8018.0 56 7337.5 57 6657.0 58 6528.5 59 6400.0 60 6159.5 61 5919.0 62 5227.0 63 4535.0 64 3764.0 65 2993.0 66 2575.0 67 2157.0 68 1686.5 69 1216.0 70 1020.5 71 825.0 72 713.0 73 601.0 74 484.5 75 280.5 76 193.0 77 155.0 78 117.0 79 80.0 80 43.0 81 39.0 82 35.0 83 33.5 84 32.0 85 23.0 86 14.0 87 11.5 88 9.0 89 6.5 90 4.0 91 4.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 135349.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.31844343142543 #Duplication Level Percentage of deduplicated Percentage of total 1 69.69435206380743 35.766056638763494 2 11.233965360860363 11.530192317638106 3 6.177745144617688 9.510967942134778 4 3.9822053297628814 8.17442315791029 5 2.7123914827452165 6.959785443557026 6 1.8442534444780376 5.678652963819459 7 1.402266085028578 5.037347893224183 8 0.9660375185361149 3.9660433398104162 9 0.6579420953368175 3.038810778062638 >10 1.295728415324148 8.419714959105718 >50 0.021595473588735804 0.7543461717485908 >100 0.011517585913992427 1.163658394225299 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCG 327 0.24159764756296687 No Hit GAATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 271 0.20022312687940066 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGC 261 0.19283481961447813 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 179 0.13225070004211334 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 172 0.12707888495666758 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15072146820441967 0.0 2 0.0 0.0 0.0 0.6693806382019816 0.0 3 0.0 0.0 0.0 0.8762532416198124 0.0 4 0.0 0.0 0.0 1.177696178028652 0.0 5 0.0 0.0 0.0 2.2401347627245123 0.0 6 0.0 0.0 0.0 2.761010424901551 0.0 7 0.0 0.0 0.0 3.289274394343512 0.0 8 0.0 0.0 0.0 4.316249104167744 0.0 9 0.0 0.0 0.0 4.704874066302669 0.0 10 0.0 0.0 0.0 5.861882983989538 0.0 11 0.0 0.0 0.0 6.833445389326851 0.0 12 0.0 0.0 0.0 7.950557447783138 0.0 13 0.0 0.0 0.0 8.30889035013188 0.0 14 0.0 0.0 0.0 8.449268188165409 0.0 15 0.0 0.0 0.0 8.723374387694035 0.0 16 0.0 0.0 0.0 9.238339404059136 0.0 17 0.0 0.0 0.0 9.811672047817124 0.0 18 0.0 0.0 0.0 10.469970225121722 0.0 19 0.0 0.0 0.0 10.854162202897694 0.0 20 0.0 0.0 0.0 11.25904144101545 0.0 21 0.0 0.0 0.0 11.757013350671228 0.0 22 0.0 0.0 0.0 12.30227042682251 0.0 23 0.0 0.0 0.0 12.785465721948444 0.0 24 0.0 0.0 0.0 13.18738963716023 0.0 25 0.0 0.0 0.0 13.581925245107094 0.0 26 0.0 0.0 0.0 13.93139217873793 0.0 27 0.0 0.0 0.0 14.2394845916852 0.0 28 0.0 0.0 0.0 14.56087595770933 0.0 29 0.0 0.0 0.0 14.930291320955456 0.0 30 0.0 0.0 0.0 15.360290803773948 0.0 31 0.0 0.0 0.0 15.710496568131276 0.0 32 0.0 0.0 0.0 16.070307131933003 0.0 33 0.0 0.0 0.0 16.425684711375776 0.0 34 0.0 0.0 0.0 16.775890475733103 0.0 35 0.0 0.0 0.0 17.150477654064677 0.0 36 0.0 0.0 0.0 17.536147293293634 0.0 37 0.0 0.0 0.0 17.89817434927484 0.0 38 0.0 0.0 0.0 18.209222085128076 0.0 39 0.0 0.0 0.0 18.577159786921218 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCCGC 25 3.8725226E-5 45.000004 17 AGCGACT 25 3.8725226E-5 45.000004 19 ACGAGCG 25 3.8725226E-5 45.000004 16 ACTATGC 20 7.0112164E-4 45.0 8 GCCCTCG 20 7.0112164E-4 45.0 13 TGCGTAG 20 7.0112164E-4 45.0 2 ACTTATA 50 1.0659278E-9 40.500004 7 ACAAGGA 35 6.2075214E-6 38.571426 4 ACAACGA 30 1.1346071E-4 37.499996 13 ACACAAC 30 1.1346071E-4 37.499996 11 AGGGTCC 30 1.1346071E-4 37.499996 7 TAACGGG 30 1.1346071E-4 37.499996 3 TGCATGG 30 1.1346071E-4 37.499996 2 CTTGCGG 30 1.1346071E-4 37.499996 2 CGCTAGG 30 1.1346071E-4 37.499996 2 GAGCGAC 30 1.1346071E-4 37.499996 18 CGGGCTC 30 1.1346071E-4 37.499996 6 AACGAGC 30 1.1346071E-4 37.499996 15 ATACGAA 30 1.1346071E-4 37.499996 19 CACAACG 30 1.1346071E-4 37.499996 12 >>END_MODULE