SRR2936529.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936529.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	95125
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	178	0.1871222076215506	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	166	0.1745072273324573	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTATGA	30	2.1444903E-6	45.000004	25
TCACATA	25	3.863786E-5	45.000004	33
TTAGCGG	25	3.863786E-5	45.000004	2
GGCAAAT	25	3.863786E-5	45.000004	8
TACGGTT	25	3.863786E-5	45.000004	33
TGTGCGG	25	3.863786E-5	45.000004	2
GACCCAC	25	3.863786E-5	45.000004	12
ACGGGAG	25	3.863786E-5	45.000004	5
ACCTATG	30	2.1444903E-6	45.000004	34
CTACGAA	30	2.1444903E-6	45.000004	11
TACGAAT	30	2.1444903E-6	45.000004	12
CTCATGC	25	3.863786E-5	45.000004	23
CGAATAT	30	2.1444903E-6	45.000004	14
GGCGATA	30	2.1444903E-6	45.000004	8
TATACTG	25	3.863786E-5	45.000004	18
CCTATGC	30	2.1444903E-6	45.000004	35
ACATAGT	25	3.863786E-5	45.000004	35
ATGCATA	25	3.863786E-5	45.000004	26
GACCTAT	30	2.1444903E-6	45.000004	33
GCATATC	25	3.863786E-5	45.000004	28