SRR2936528.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936528.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	281352
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCG	1486	0.5281640080752936	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTC	1428	0.507549262134266	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGC	1263	0.4489038641985839	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	533	0.18944240666496062	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTT	439	0.15603230117432967	No Hit
GCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC	343	0.12191134237538742	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCT	319	0.11338110267565184	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTC	313	0.11124854275071797	No Hit
GAACTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCT	299	0.10627256959253888	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTTAG	20	7.0241943E-4	45.000004	1
CGGGAAC	20	7.0241943E-4	45.000004	6
ACATACG	20	7.0241943E-4	45.000004	17
TGTCGTG	20	7.0241943E-4	45.000004	27
CGGCTAG	35	1.2075543E-7	45.0	2
ACAACGA	135	0.0	41.666668	13
CATATCA	60	3.6379788E-12	41.250004	29
ACACGAC	110	0.0	40.909092	26
TCAAGCG	110	0.0	40.909092	17
TGGTCAA	110	0.0	40.909092	14
CACAACG	140	0.0	40.17857	12
GGTAAAT	40	3.4458208E-7	39.375004	8
TGTACGG	40	3.4458208E-7	39.375004	2
AACGAGC	145	0.0	38.793102	15
TGATACC	205	0.0	38.414635	4
TTACACG	345	0.0	37.826088	34
ACACGCG	340	0.0	37.72059	36
CACGACC	120	0.0	37.500004	27
AACGGGA	60	1.546141E-10	37.500004	4
AACGGCT	30	1.13773174E-4	37.500004	7