##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936526.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 105562 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.025700536177794 33.0 31.0 34.0 30.0 34.0 2 32.13404444781266 33.0 31.0 34.0 30.0 34.0 3 32.07206191621985 33.0 31.0 34.0 30.0 34.0 4 35.7885886966901 37.0 35.0 37.0 35.0 37.0 5 35.853204751709896 37.0 35.0 37.0 35.0 37.0 6 35.84573047119228 37.0 35.0 37.0 35.0 37.0 7 26.75109414372596 36.0 10.0 37.0 0.0 37.0 8 31.144284875239197 36.0 19.0 37.0 17.0 37.0 9 35.979774919004946 39.0 32.0 39.0 32.0 39.0 10 36.726104090487105 38.0 35.0 39.0 33.0 39.0 11 37.0625224986264 39.0 37.0 39.0 34.0 39.0 12 36.99692124059794 39.0 35.0 39.0 34.0 39.0 13 36.82657585115856 39.0 35.0 39.0 33.0 39.0 14 37.958763570224136 40.0 37.0 41.0 33.0 41.0 15 38.118328565203385 40.0 37.0 41.0 33.0 41.0 16 38.08900930258995 40.0 36.0 41.0 33.0 41.0 17 37.99483715731039 40.0 36.0 41.0 33.0 41.0 18 37.925939258445275 40.0 36.0 41.0 33.0 41.0 19 37.80932532540118 40.0 36.0 41.0 33.0 41.0 20 37.85799814327125 40.0 36.0 41.0 33.0 41.0 21 37.80327201076145 40.0 36.0 41.0 33.0 41.0 22 37.78807714897406 40.0 36.0 41.0 33.0 41.0 23 37.74710596616207 40.0 36.0 41.0 33.0 41.0 24 37.68631704590667 39.0 35.0 41.0 33.0 41.0 25 37.58300335347947 39.0 35.0 41.0 33.0 41.0 26 37.453231276406285 39.0 35.0 41.0 33.0 41.0 27 37.34966181012106 39.0 35.0 41.0 33.0 41.0 28 37.33579318315303 39.0 35.0 41.0 33.0 41.0 29 37.34753983441011 39.0 35.0 41.0 33.0 41.0 30 37.2819101570641 39.0 35.0 41.0 33.0 41.0 31 37.15387165836191 39.0 35.0 41.0 32.0 41.0 32 37.01768628862659 39.0 35.0 41.0 32.0 41.0 33 36.93587654648453 39.0 35.0 41.0 31.0 41.0 34 36.81085049544344 39.0 35.0 41.0 31.0 41.0 35 36.71681097364582 39.0 35.0 41.0 31.0 41.0 36 36.5828991493151 39.0 35.0 41.0 31.0 41.0 37 36.47017866277638 39.0 35.0 41.0 30.0 41.0 38 36.37415926185559 39.0 35.0 40.0 30.0 41.0 39 36.350343873742446 39.0 35.0 40.0 30.0 41.0 40 36.14571531422292 39.0 35.0 40.0 30.0 41.0 41 36.101968511396144 38.0 35.0 40.0 30.0 41.0 42 36.045622477785564 38.0 35.0 40.0 30.0 41.0 43 36.03568518974631 38.0 35.0 40.0 30.0 41.0 44 35.82105303044656 38.0 35.0 40.0 29.0 41.0 45 35.71413955779542 38.0 35.0 40.0 29.0 41.0 46 35.59232488963832 38.0 35.0 40.0 28.0 41.0 47 35.46714726890358 38.0 34.0 40.0 28.0 41.0 48 35.367082851783785 38.0 34.0 40.0 27.0 41.0 49 35.278471419639644 38.0 34.0 40.0 27.0 41.0 50 35.00308823250791 37.0 34.0 40.0 26.0 41.0 51 32.82130880430458 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 9.0 10 5.0 11 5.0 12 8.0 13 4.0 14 9.0 15 9.0 16 13.0 17 22.0 18 39.0 19 79.0 20 107.0 21 183.0 22 267.0 23 388.0 24 521.0 25 746.0 26 965.0 27 1129.0 28 1360.0 29 1596.0 30 2060.0 31 2600.0 32 3471.0 33 5190.0 34 8575.0 35 10464.0 36 9650.0 37 15546.0 38 19661.0 39 20865.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.42034065288645 18.464977927663366 22.894602224285254 14.220079195164928 2 29.128853185805497 25.68537920842727 28.06312877740096 17.12263882836627 3 32.70400333453326 24.12042212159679 27.656732536329358 15.518842007540593 4 28.49036585134802 25.63801367916485 27.206760008336335 18.66486046115079 5 25.47791819025786 30.61707811523086 24.975843580076162 18.929160114435117 6 27.609367007066936 34.43473977378223 23.558666944544438 14.397226274606393 7 60.83628578465736 28.370057407021466 6.446448532615904 4.347208275705273 8 82.53348742918854 5.693336617343362 7.590799719596067 4.182376233872037 9 76.58153502207233 7.760368314355545 9.644569068414771 6.013527595157348 10 44.85420890093026 24.788276084196966 15.945131770902407 14.412383243970368 11 36.18536973532142 24.078740455845853 22.642617608609157 17.093272200223566 12 32.55717019381974 23.1143782800629 26.150508705784283 18.177942820333072 13 24.44819158409276 28.18154260055702 28.5993065686516 18.770959246698624 14 20.022356529811862 30.92400674485137 28.539626001780942 20.514010723555824 15 19.15367272313901 26.103143176521854 36.72533676891306 18.017847331426083 16 22.28737613914098 23.783179553248328 33.82088251454122 20.108561793069477 17 21.737935999696862 23.474356302457323 28.82760841969648 25.960099278149336 18 24.03611147950967 23.752865614520378 30.62086735757185 21.590155548398098 19 24.873534036869327 26.634584414846252 26.818362668384456 21.673518879899962 20 27.274966370474225 25.13972831132415 27.29675451393494 20.288550804266688 21 24.59218279305053 26.57869309031659 27.783672154752658 21.04545196188022 22 22.736401356548757 25.238248612189995 27.46348117693867 24.561868854322576 23 21.916977700308824 27.11487088156723 28.131335139538848 22.836816278585097 24 23.770864515640096 23.68087001004149 30.717493037267197 21.830772437051213 25 20.9961918114473 25.91747030181315 28.882552433640896 24.203785453098654 26 20.05645971088081 28.67035486254523 28.992440461529718 22.28074496504424 27 21.61857486595555 28.00155358935981 28.399424035164166 21.98044750952047 28 19.298611242682025 26.574903847975595 31.755745438699535 22.370739470642846 29 20.60874178208067 24.407457228927075 31.961311835698453 23.022489153293797 30 22.612303669881207 26.27365908186658 29.884807032833784 21.229230215418426 31 24.673651503381897 25.45991928913814 27.34696197495311 22.519467232526857 32 24.769329872491998 25.73937591178644 28.39847672457892 21.092817491142647 33 25.43623652450692 25.983782042780547 27.135711714442696 21.444269718269833 34 21.526685739186448 25.66169644379606 29.864913510543566 22.94670430647392 35 21.91981963206457 24.988158617684395 30.471192285102592 22.620829465148443 36 24.715333169132833 24.606392451829258 28.214698471040716 22.463575907997196 37 21.99560447888445 27.532634849661807 29.639453591254426 20.832307080199314 38 22.00507758473693 27.341278111441618 27.42748337469923 23.226160929122223 39 22.601883253443475 25.287508762622913 29.287054053541993 22.82355393039162 40 23.892120270551903 23.964115875030785 29.391258217919326 22.752505636497983 41 19.77131922472102 24.87258672628408 29.312631439343704 26.0434626096512 42 21.560788920255394 24.74943635020178 28.491313161933274 25.19846156760956 43 23.682764631211988 23.57761315624941 27.99397510467782 24.745647107860783 44 21.805195051249502 25.951573482882097 28.574676493435135 23.668554972433263 45 21.44048047592884 26.308709573520773 27.860404312157783 24.390405638392604 46 22.9599666546674 26.214925825581176 28.67982796839772 22.14527955135371 47 21.224493662492186 25.762111365832403 30.168052897823078 22.845342073852333 48 22.490100604384153 23.178795399859798 30.127318542657395 24.203785453098654 49 21.685833917508194 22.835868967999847 31.26503855554082 24.213258558951136 50 21.379852598472933 25.28182489911142 29.690608362857844 23.647714139557795 51 21.19702165551998 24.92847805081374 27.170762206096892 26.70373808756939 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 29.0 1 136.0 2 243.0 3 326.0 4 409.0 5 317.0 6 225.0 7 199.5 8 174.0 9 187.5 10 201.0 11 215.0 12 229.0 13 222.0 14 215.0 15 244.0 16 273.0 17 265.0 18 257.0 19 263.0 20 269.0 21 342.0 22 415.0 23 428.0 24 441.0 25 565.0 26 811.5 27 934.0 28 1120.5 29 1307.0 30 1585.5 31 1864.0 32 2122.5 33 2381.0 34 2630.0 35 2879.0 36 3024.5 37 3170.0 38 3604.5 39 4039.0 40 4785.0 41 5531.0 42 6383.5 43 7236.0 44 7691.0 45 8146.0 46 8737.0 47 9328.0 48 9388.5 49 9449.0 50 9298.5 51 9148.0 52 8030.5 53 6913.0 54 6203.5 55 5494.0 56 5214.5 57 4935.0 58 4651.0 59 4367.0 60 4211.5 61 4056.0 62 3701.0 63 3346.0 64 2873.5 65 2401.0 66 2041.0 67 1681.0 68 1384.5 69 1088.0 70 927.5 71 767.0 72 604.0 73 441.0 74 356.0 75 201.5 76 132.0 77 108.5 78 85.0 79 62.5 80 40.0 81 33.0 82 26.0 83 18.0 84 10.0 85 11.5 86 13.0 87 8.5 88 4.0 89 3.5 90 3.0 91 1.5 92 0.0 93 3.0 94 6.0 95 3.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 105562.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.78388056308141 #Duplication Level Percentage of deduplicated Percentage of total 1 68.39995140323168 32.00015156969364 2 10.731786336208641 10.041492203633883 3 5.750617583930668 8.071086186317046 4 3.881666869153201 7.263977567685341 5 2.6444741424695257 6.185938121672572 6 2.1220588830842746 5.95668896004244 7 1.6441906613210222 5.3845133665523575 8 1.2250435346049489 4.584983232602641 9 0.9982586158020492 4.203217066747504 >10 2.5776535860365284 15.066974858377066 >50 0.008099461385817843 0.20177715465792617 >100 0.016198922771635687 1.039199712017582 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCG 190 0.1799890111972111 No Hit GCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTCTGC 170 0.16104279949224154 TruSeq Adapter, Index 23 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 144 0.13641272427578105 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGC 140 0.13262348193478712 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTC 128 0.12125575491180539 TruSeq Adapter, Index 23 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTGCTGTTCTCGTATGCCGTCTTCTGC 123 0.116519201985563 TruSeq Adapter, Index 23 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13546541369053258 0.0 2 0.0 0.0 0.0 0.6555389249919479 0.0 3 0.0 0.0 0.0 0.8279494515071711 0.0 4 0.0 0.0 0.0 1.0571986131373032 0.0 5 0.0 0.0 0.0 1.8084159072393475 0.0 6 0.0 0.0 0.0 2.247968018794642 0.0 7 0.0 0.0 0.0 2.6789943350827 0.0 8 0.0 0.0 0.0 3.4917868172258957 0.0 9 0.0 0.0 0.0 3.773138061044694 0.0 10 0.0 0.0 0.0 4.7138174721964345 0.0 11 0.0 0.0 0.0 5.627024876375969 0.0 12 0.0 0.0 0.0 6.530759174703018 0.0 13 0.0 0.0 0.0 6.8509501525170045 0.0 14 0.0 0.0 0.0 6.9693639756730645 0.0 15 0.0 0.0 0.0 7.228927076031147 0.0 16 0.0 0.0 0.0 7.730054375627593 0.0 17 0.0 0.0 0.0 8.328754665504633 0.0 18 0.0 0.0 0.0 9.029764498588507 0.0 19 0.0 0.0 0.0 9.422898391466626 0.0 20 0.0 0.0 0.0 9.795191451469279 0.0 21 0.0 0.0 0.0 10.258426327655785 0.0 22 0.0 0.0 0.0 10.798393361247419 0.0 23 0.0 0.0 0.0 11.28341638089464 0.0 24 0.0 0.0 0.0 11.701180348989219 0.0 25 0.0 0.0 0.0 12.052632576116405 0.0 26 0.0 0.0 0.0 12.41734715143707 0.0 27 0.0 0.0 0.0 12.747958545688789 0.0 28 0.0 0.0 0.0 13.12214622686194 0.0 29 0.0 0.0 0.0 13.47738769633012 0.0 30 0.0 0.0 0.0 13.896098975009947 0.0 31 0.0 0.0 0.0 14.271233966768344 0.0 32 0.0 0.0 0.0 14.619844262139786 0.0 33 0.0 0.0 0.0 14.991190011557189 0.0 34 0.0 0.0 0.0 15.355904586877854 0.0 35 0.0 0.0 0.0 15.755669653852712 0.0 36 0.0 0.0 0.0 16.127015403270118 0.0 37 0.0 0.0 0.0 16.49362459976128 0.0 38 0.0 0.0 0.0 16.8223413728425 0.0 39 0.0 0.0 0.0 17.181372084651674 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCCCG 20 7.004176E-4 45.0 14 AGCCCGA 20 7.004176E-4 45.0 15 TATGCCA 20 7.004176E-4 45.0 10 TGTGCGG 25 3.8666964E-5 45.0 2 ACGGGCT 20 7.004176E-4 45.0 5 TCGGAGC 20 7.004176E-4 45.0 36 GATTGGG 35 1.1979682E-7 45.0 3 CGAGATA 25 3.8666964E-5 45.0 19 AAGCGGG 55 6.002665E-11 40.909092 3 GGCGATA 40 3.4185905E-7 39.375 8 TGGGAAC 40 3.4185905E-7 39.375 6 GGACAGC 40 3.4185905E-7 39.375 8 TGACGGG 35 6.194541E-6 38.571426 3 AAGGCGA 35 6.194541E-6 38.571426 6 TGATGGG 95 0.0 37.894737 3 ATTTAGC 60 1.5279511E-10 37.499996 20 ATGGGAT 60 1.5279511E-10 37.499996 5 ATAGGGT 30 1.1329129E-4 37.499996 5 ATAGGAG 30 1.1329129E-4 37.499996 5 CACGGGA 30 1.1329129E-4 37.499996 4 >>END_MODULE