SRR2936525.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936525.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	152404
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	315	0.20668748851736174	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG	281	0.18437836277263064	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC	224	0.14697776961234615	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC	220	0.14435316658355424	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	156	0.10235951812288392	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGAAT	40	6.7484507E-9	45.0	12
ACGTGAG	25	3.8748454E-5	45.0	44
AAGGGCG	40	6.7484507E-9	45.0	5
TGGGCAT	25	3.8748454E-5	45.0	6
CACGTGA	25	3.8748454E-5	45.0	43
AATAGGC	20	7.014022E-4	45.0	4
TCAAGCG	25	3.8748454E-5	45.0	17
GACTAAT	25	3.8748454E-5	45.0	9
AACACGT	25	3.8748454E-5	45.0	41
CTACGAA	45	1.909575E-8	40.0	11
CGAATAT	45	1.909575E-8	40.0	14
TGACTAT	45	1.909575E-8	40.0	23
GGTATGC	40	3.4319783E-7	39.375	8
GAACATA	40	3.4319783E-7	39.375	9
CACTAGG	35	6.2126946E-6	38.571426	2
CGGTAGT	35	6.2126946E-6	38.571426	12
ACACGTG	30	1.1352816E-4	37.500004	42
CACGACC	30	1.1352816E-4	37.500004	27
TCTAAGG	30	1.1352816E-4	37.500004	2
AAACACG	30	1.1352816E-4	37.500004	40