SRR2936523.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936523.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	60066
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCG	334	0.5560550061598908	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC	320	0.5327473112909134	No Hit
GAATCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC	279	0.464489062031765	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	181	0.30133519794892283	No Hit
GCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC	162	0.26970332634102484	No Hit
CCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC	115	0.19145606499517198	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCG	111	0.18479672360403554	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	110	0.18313188825625146	No Hit
CTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGCT	102	0.16981320547397863	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCT	85	0.14151100456164883	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC	78	0.12985715712716012	No Hit
GAATCTATCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC	64	0.10654946225818268	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGGTC	20	6.979949E-4	45.000004	5
TGTGAGG	20	6.979949E-4	45.000004	2
GTCACTT	20	6.979949E-4	45.000004	4
AGCTAGG	20	6.979949E-4	45.000004	3
GCTGTAC	20	6.979949E-4	45.000004	28
AAGGCGA	20	6.979949E-4	45.000004	6
GGGCGTC	20	6.979949E-4	45.000004	10
AACGGGA	20	6.979949E-4	45.000004	4
TTTGAAG	25	3.846665E-5	45.0	2
GGGTTCC	25	3.846665E-5	45.0	7
CTTTAGG	25	3.846665E-5	45.0	2
CGAGGGA	25	3.846665E-5	45.0	4
TATCTCT	30	2.1312026E-6	44.999996	6
TAAGGGA	60	3.6379788E-12	41.249996	4
ACGGCTG	50	1.0459189E-9	40.5	8
AAGGGAC	45	1.8764695E-8	40.0	5
AACTTAA	145	0.0	38.793102	45
AGGCGAT	35	6.1499686E-6	38.571426	7
TAGGGAG	35	6.1499686E-6	38.571426	5
CTATCTC	35	6.1499686E-6	38.571426	5