SRR2936522.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936522.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	108795
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	198	0.18199365779677376	No Hit
GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	124	0.1139758260949492	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGCGAT	30	2.1473552E-6	45.000004	7
GCGGGTA	20	7.005117E-4	45.000004	5
TCACTTA	20	7.005117E-4	45.000004	5
GTCGGCA	20	7.005117E-4	45.000004	20
AGTCGAG	20	7.005117E-4	45.000004	31
CGTGCAT	25	3.8674756E-5	45.0	17
GGCACCG	25	3.8674756E-5	45.0	8
ATAGCGG	35	1.1984048E-7	45.0	2
CACGCGC	25	3.8674756E-5	45.0	11
TATGCGC	25	3.8674756E-5	45.0	23
AATATGC	25	3.8674756E-5	45.0	40
GCGTGCA	25	3.8674756E-5	45.0	16
CAGACAC	25	3.8674756E-5	45.0	32
ATATGGG	50	1.0622898E-9	40.5	3
TAGCGGG	45	1.900844E-8	40.0	3
TATGCGG	40	3.419882E-7	39.375004	2
CGAAGGA	40	3.419882E-7	39.375004	4
CGTTTTT	115	0.0	39.130436	1
GCGAAGG	35	6.1962764E-6	38.571426	3
GCGGGAA	35	6.1962764E-6	38.571426	5