SRR2936521.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936521.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	207912
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCG	3000	1.4429181576820964	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC	2273	1.0932509908038017	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC	2245	1.0797837546654354	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCG	717	0.344857439686021	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	661	0.31792296740928855	No Hit
GAACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCT	556	0.26742083189041516	No Hit
GCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC	549	0.26405402285582363	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCT	543	0.2611681865404594	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC	490	0.23567663242140907	No Hit
GAATCTATCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC	458	0.22028550540613337	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTT	412	0.19816076032167454	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTC	383	0.18421255146408097	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTA	226	0.1086998345453846	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTT	213	0.10244718919542883	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTACGGG	20	7.019945E-4	45.000004	3
GCTACGA	20	7.019945E-4	45.000004	10
CGGGTAT	25	3.8797523E-5	45.0	6
GCGATTG	25	3.8797523E-5	45.0	9
TTGGGTA	25	3.8797523E-5	45.0	5
TTAATCG	30	2.1568994E-6	44.999996	20
AATCGTT	30	2.1568994E-6	44.999996	22
TAATCGT	30	2.1568994E-6	44.999996	21
TGATACC	335	0.0	43.656715	4
TACGGCT	300	0.0	42.75	7
ACGGCTG	360	0.0	42.5	8
GACACGA	65	0.0	41.53846	25
AAACACG	65	0.0	41.53846	40
TCAAGCG	65	0.0	41.53846	17
TGGTCAA	65	0.0	41.53846	14
ACGACCA	65	0.0	41.53846	28
AACACGT	65	0.0	41.53846	41
AAACGGC	60	3.6379788E-12	41.249996	6
AACGGCT	60	3.6379788E-12	41.249996	7
ATGAAAC	155	0.0	40.64516	3