##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936520.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 192791 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06384115441074 33.0 31.0 34.0 30.0 34.0 2 32.178084039192704 33.0 31.0 34.0 30.0 34.0 3 32.10647281252756 33.0 31.0 34.0 30.0 34.0 4 35.819789305517375 37.0 35.0 37.0 35.0 37.0 5 35.88065314252221 37.0 35.0 37.0 35.0 37.0 6 35.85006042813202 37.0 35.0 37.0 35.0 37.0 7 26.697060547432194 35.0 10.0 37.0 0.0 37.0 8 31.088873443262393 35.0 19.0 37.0 17.0 37.0 9 35.971025618415794 39.0 32.0 39.0 32.0 39.0 10 36.72266858930137 38.0 35.0 39.0 33.0 39.0 11 37.048176522762994 39.0 37.0 39.0 34.0 39.0 12 37.059940557391165 39.0 37.0 39.0 34.0 39.0 13 36.9926863805883 39.0 37.0 39.0 33.0 39.0 14 38.1720308520626 40.0 37.0 41.0 33.0 41.0 15 38.25502746497502 40.0 37.0 41.0 33.0 41.0 16 38.22916007489976 40.0 37.0 41.0 33.0 41.0 17 38.126344072078055 40.0 37.0 41.0 33.0 41.0 18 38.04073841621238 40.0 37.0 41.0 33.0 41.0 19 37.91886032024316 40.0 37.0 41.0 33.0 41.0 20 38.022366189293066 40.0 37.0 41.0 34.0 41.0 21 37.94165702755834 40.0 36.0 41.0 33.0 41.0 22 37.93863302747535 40.0 36.0 41.0 33.0 41.0 23 37.89928471764761 40.0 36.0 41.0 33.0 41.0 24 37.84085875378 40.0 36.0 41.0 33.0 41.0 25 37.74841667920183 40.0 36.0 41.0 33.0 41.0 26 37.59292705572356 40.0 36.0 41.0 33.0 41.0 27 37.51571909477102 40.0 36.0 41.0 33.0 41.0 28 37.466935697205784 40.0 36.0 41.0 33.0 41.0 29 37.47739780383939 40.0 36.0 41.0 33.0 41.0 30 37.37791183198386 40.0 36.0 41.0 32.0 41.0 31 37.270775088048715 39.0 35.0 41.0 32.0 41.0 32 37.08849998184562 39.0 35.0 41.0 31.0 41.0 33 36.98378036319123 39.0 35.0 41.0 31.0 41.0 34 36.85329190677988 39.0 35.0 41.0 31.0 41.0 35 36.767307602533315 39.0 35.0 41.0 31.0 41.0 36 36.62468165007703 39.0 35.0 41.0 30.0 41.0 37 36.49831164317836 39.0 35.0 41.0 30.0 41.0 38 36.29282487253035 39.0 35.0 41.0 30.0 41.0 39 36.19909643084999 39.0 35.0 40.0 30.0 41.0 40 36.009979718970285 39.0 35.0 40.0 29.0 41.0 41 35.96922055490142 39.0 35.0 40.0 29.0 41.0 42 35.890057108474984 38.0 35.0 40.0 28.0 41.0 43 35.810359404744 38.0 35.0 40.0 28.0 41.0 44 35.6189085590095 38.0 35.0 40.0 27.0 41.0 45 35.44307047528152 38.0 34.0 40.0 27.0 41.0 46 35.301160323874036 38.0 34.0 40.0 26.0 41.0 47 35.173955215751775 38.0 34.0 40.0 26.0 41.0 48 35.09927849329066 38.0 34.0 40.0 26.0 41.0 49 34.950023600686755 38.0 34.0 40.0 26.0 41.0 50 34.74509183519977 37.0 34.0 40.0 24.0 41.0 51 32.699368746466384 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 12.0 10 13.0 11 8.0 12 4.0 13 4.0 14 6.0 15 13.0 16 32.0 17 39.0 18 70.0 19 134.0 20 227.0 21 375.0 22 545.0 23 762.0 24 1149.0 25 1538.0 26 2008.0 27 2300.0 28 2743.0 29 3138.0 30 3826.0 31 4630.0 32 6302.0 33 8571.0 34 13611.0 35 16960.0 36 18512.0 37 29503.0 38 36762.0 39 38981.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.249990922812785 17.75342209957934 23.523919685047538 14.472667292560338 2 29.215575415864848 26.021442909679394 26.246038456152 18.51694321830376 3 32.21830894595702 25.2864500936247 26.205061439590022 16.290179520828254 4 28.194262180288497 26.085242568377154 26.18690706516383 19.533588186170515 5 26.12829437058784 30.8323521326203 23.994377330892004 19.04497616589986 6 26.62053726574373 35.547302519308474 24.187332396221812 13.644827818725977 7 62.78456981913057 28.00597538266828 5.698917480587787 3.510537317613374 8 85.1512778086114 5.383550061984222 6.195828643453273 3.2693434859511075 9 79.61834317992023 7.03248595629464 7.780964879065931 5.568205984719204 10 42.51702620972971 28.769496501392698 14.466442935614216 14.24703435326338 11 32.36406263777874 25.945713233501564 23.805053140447427 17.885170988272275 12 28.037615863811073 24.906764319911197 28.24509442868184 18.810525387595895 13 23.698201679538982 26.901152024731445 29.867576805971236 19.53306948975834 14 21.538868515646477 28.420413815997637 29.507601495920454 20.533116172435438 15 20.402404676566853 25.305641860875248 33.7826973250826 20.509256137475298 16 24.3652452655985 25.46384426658921 29.99932569466417 20.171584773148123 17 24.951372211358414 24.994942709981274 26.975325611672744 23.078359466987568 18 26.276122848058257 24.194075449580115 28.15069168166564 21.379110020695986 19 25.524531746813906 25.980984589529594 26.339403810343843 22.155079853312653 20 27.62473351971824 26.1516357091358 26.51627928689617 19.707351484249784 21 25.679621974054808 27.24349165676821 27.630439180252193 19.446447188924797 22 25.986171553651367 23.605355021759316 27.58686868162933 22.82160474295999 23 23.762001338236743 27.828581209703774 27.176579819597386 21.232837632462097 24 23.700276465187688 25.156257294168295 29.31153425211758 21.831931988526435 25 22.846502170744483 28.092078987089646 27.29069303027631 21.77072581188956 26 23.570083665731286 27.917278296186026 26.335772935458607 22.176865102624085 27 22.59493441083868 27.05001789502622 27.11070537525092 23.244342318884183 28 20.177809130094246 27.464456328355574 29.373777821578805 22.983956719971367 29 22.272305242464636 26.085242568377154 28.19374348387632 23.448708705281884 30 23.16342567858458 26.03233553433511 28.36698808554341 22.437250701536897 31 24.74700582496071 26.437956128657458 25.9021427348787 22.91289531150313 32 25.57225181673418 26.897002453434027 26.35859557759439 21.172150152237396 33 23.741253481749666 27.310403493939035 25.417680285905465 23.530662738405837 34 22.21317385147647 27.307810011878146 28.262730106695855 22.21628602994953 35 21.462101446644294 27.896530439698946 28.332754122339736 22.30861399131702 36 23.92954027936989 28.687023771856566 26.031298141510756 21.352137807262785 37 23.588756736569653 28.216566126012104 25.997064178307077 22.19761295911116 38 22.66910799777998 28.467096493093557 26.317099864620236 22.546695644506226 39 23.02234025447246 28.387217245618313 25.94519453708939 22.64524796281984 40 24.487657618872248 26.733094387186124 27.183841569367868 21.595406424573763 41 20.96830246225187 28.060438505946856 26.558293696282504 24.412965335518773 42 23.306067191933234 25.692589384359227 27.89497435046242 23.10636907324512 43 22.784258601283256 26.367413416601398 26.967026469077915 23.881301513037435 44 22.792557743878085 26.350815131411736 26.742949619017487 24.113677505692692 45 22.578336125649017 27.248159924477804 26.245001063327646 23.928502886545534 46 23.30969806681847 27.51580727316109 26.29116504401139 22.883329616009046 47 21.434091840386742 27.672972286050694 28.4728021536275 22.42013371993506 48 22.562256536871534 27.057279644796694 27.532405558350753 22.848058259981016 49 22.936236650051093 26.414614790109496 28.285034052419462 22.364114507419952 50 21.58347640709369 27.97018533022807 27.890306082752826 22.55603217992541 51 21.95382564538801 26.628317711926385 25.980984589529594 25.436872053156005 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 33.0 1 171.5 2 310.0 3 490.0 4 670.0 5 505.0 6 340.0 7 327.0 8 314.0 9 301.0 10 288.0 11 295.5 12 303.0 13 315.0 14 327.0 15 313.5 16 300.0 17 345.0 18 390.0 19 445.5 20 501.0 21 569.0 22 637.0 23 797.5 24 958.0 25 1104.5 26 1530.5 27 1810.0 28 2201.5 29 2593.0 30 3134.5 31 3676.0 32 4063.0 33 4450.0 34 5156.0 35 5862.0 36 6485.5 37 7109.0 38 7647.5 39 8186.0 40 9026.5 41 9867.0 42 10640.5 43 11414.0 44 12378.0 45 13342.0 46 14531.5 47 15721.0 48 15205.0 49 14689.0 50 14950.5 51 15212.0 52 14240.0 53 13268.0 54 12559.0 55 11850.0 56 11082.0 57 10314.0 58 9680.0 59 9046.0 60 8399.0 61 7752.0 62 6919.0 63 6086.0 64 5270.0 65 4454.0 66 3869.0 67 3284.0 68 2742.0 69 2200.0 70 1823.0 71 1446.0 72 1229.0 73 1012.0 74 852.0 75 563.0 76 434.0 77 328.5 78 223.0 79 155.0 80 87.0 81 62.5 82 38.0 83 28.0 84 18.0 85 15.0 86 12.0 87 10.5 88 9.0 89 6.5 90 4.0 91 3.5 92 3.0 93 3.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 192791.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.38324921806516 #Duplication Level Percentage of deduplicated Percentage of total 1 65.21837898587978 28.29385189142647 2 10.77726897739093 9.351058918725458 3 6.463491911668001 8.41221841268524 4 4.464424490967132 7.747249612274432 5 3.186312605363527 6.911629692257419 6 2.27047190903765 5.9100269203437925 7 1.9452647688279392 5.907433438282907 8 1.435932997764201 4.983635128195818 9 1.1453986776503784 4.472200465789379 >10 3.0715336147012757 16.667271812480873 >50 0.015542988318846472 0.48394375256106353 >100 0.005978072430325566 0.8594799549771515 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCCG 476 0.24689949219621246 No Hit GAATCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCCGTCTTC 415 0.21525901105342052 RNA PCR Primer, Index 46 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGC 362 0.18776810120804394 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 276 0.1431602097608291 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.038902230913268776 0.0 2 0.0 0.0 0.0 0.24482470654750482 0.0 3 0.0 0.0 0.0 0.3070682760087349 0.0 4 0.0 0.0 0.0 0.44815370012085626 0.0 5 0.0 0.0 0.0 1.0332432530564186 0.0 6 0.0 0.0 0.0 1.2780679596039235 0.0 7 0.0 0.0 0.0 1.5405283441654434 0.0 8 0.0 0.0 0.0 2.00372424023943 0.0 9 0.0 0.0 0.0 2.200828876866659 0.0 10 0.0 0.0 0.0 3.0084391906261185 0.0 11 0.0 0.0 0.0 3.4752659615853436 0.0 12 0.0 0.0 0.0 4.1506086902396895 0.0 13 0.0 0.0 0.0 4.326965470379841 0.0 14 0.0 0.0 0.0 4.407882110679441 0.0 15 0.0 0.0 0.0 4.553635802501154 0.0 16 0.0 0.0 0.0 4.824914026069682 0.0 17 0.0 0.0 0.0 5.130426212841885 0.0 18 0.0 0.0 0.0 5.509074593731035 0.0 19 0.0 0.0 0.0 5.719146640662687 0.0 20 0.0 0.0 0.0 5.9307747768308685 0.0 21 0.0 0.0 0.0 6.193235161392389 0.0 22 0.0 0.0 0.0 6.488892116333231 0.0 23 0.0 0.0 0.0 6.758614250665228 0.0 24 0.0 0.0 0.0 6.974910654543002 0.0 25 0.0 0.0 0.0 7.189650969184246 0.0 26 0.0 0.0 0.0 7.419952176190797 0.0 27 0.0 0.0 0.0 7.639360758541633 0.0 28 0.0 0.0 0.0 7.8442458413515155 0.0 29 0.0 0.0 0.0 8.077659226831129 0.0 30 0.0 0.0 0.0 8.367091824825847 0.0 31 0.0 0.0 0.0 8.59220606771063 0.0 32 0.0 0.0 0.0 8.835474685021603 0.0 33 0.0 0.0 0.0 9.062663713555093 0.0 34 0.0 0.0 0.0 9.314231473460898 0.0 35 0.0 0.0 0.0 9.60988842840174 0.0 36 5.18696412176917E-4 0.0 0.0 9.865087063192783 0.0 37 5.18696412176917E-4 0.0 0.0 10.093313484550627 0.0 38 5.18696412176917E-4 0.0 0.0 10.358367351173031 0.0 39 5.18696412176917E-4 0.0 0.0 10.754132713664019 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGGG 30 2.1560754E-6 45.000004 3 AAGGCGA 30 2.1560754E-6 45.000004 6 TGATCGT 20 7.0186664E-4 45.0 29 TAAGGAT 40 6.7648216E-9 45.0 5 TGCGTTG 20 7.0186664E-4 45.0 1 GCGAGAC 80 0.0 39.375 21 ACACGAC 80 0.0 39.375 26 CATGCGG 40 3.4382902E-7 39.375 2 CGCGCAA 40 3.4382902E-7 39.375 18 CACGACC 80 0.0 39.375 27 CGCAATC 40 3.4382902E-7 39.375 20 ACACGTG 75 0.0 39.0 42 AGGCGAT 75 0.0 39.0 7 TCATGAT 35 6.2212694E-6 38.57143 26 TTACGGG 35 6.2212694E-6 38.57143 3 CGTTTTA 35 6.2212694E-6 38.57143 1 ATGGGAA 170 0.0 38.38235 5 CATGGGA 130 0.0 38.07692 4 CGGTAGT 95 0.0 37.894737 12 GATCGGG 30 1.13640024E-4 37.500004 3 >>END_MODULE