##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936515.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 200641 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.007660448263316 33.0 31.0 34.0 30.0 34.0 2 32.124236820988735 33.0 31.0 34.0 30.0 34.0 3 32.037918471299484 33.0 31.0 34.0 30.0 34.0 4 35.784570451702294 37.0 35.0 37.0 35.0 37.0 5 35.8487796611859 37.0 35.0 37.0 35.0 37.0 6 35.798122018929334 37.0 35.0 37.0 35.0 37.0 7 26.809729815939914 35.0 10.0 37.0 0.0 37.0 8 31.11997049456492 35.0 19.0 37.0 17.0 37.0 9 35.89954196799258 39.0 32.0 39.0 32.0 39.0 10 36.66095164996187 38.0 35.0 39.0 33.0 39.0 11 37.00435105486915 39.0 37.0 39.0 34.0 39.0 12 37.01553022562687 39.0 37.0 39.0 33.0 39.0 13 36.95319002596678 39.0 37.0 39.0 33.0 39.0 14 38.027860706435874 40.0 37.0 41.0 33.0 41.0 15 38.10940934305551 40.0 37.0 41.0 33.0 41.0 16 38.09528959684212 40.0 37.0 41.0 33.0 41.0 17 37.981618911389 40.0 37.0 41.0 33.0 41.0 18 37.89806669623856 40.0 36.0 41.0 33.0 41.0 19 37.782073454578075 40.0 36.0 41.0 33.0 41.0 20 37.85824432693218 40.0 36.0 41.0 33.0 41.0 21 37.78598591514197 40.0 36.0 41.0 33.0 41.0 22 37.808942339800936 40.0 36.0 41.0 33.0 41.0 23 37.74026744284568 40.0 36.0 41.0 33.0 41.0 24 37.67797209942135 40.0 36.0 41.0 33.0 41.0 25 37.567660647624365 39.0 36.0 41.0 33.0 41.0 26 37.437816797165084 39.0 35.0 41.0 33.0 41.0 27 37.31085371384712 39.0 35.0 41.0 32.0 41.0 28 37.266007446135134 39.0 35.0 41.0 32.0 41.0 29 37.239213321305215 39.0 35.0 41.0 32.0 41.0 30 37.13149356313017 39.0 35.0 41.0 32.0 41.0 31 36.96177750310255 39.0 35.0 41.0 31.0 41.0 32 36.83268624059888 39.0 35.0 41.0 31.0 41.0 33 36.71407638518548 39.0 35.0 41.0 31.0 41.0 34 36.564047228632234 39.0 35.0 41.0 30.0 41.0 35 36.47814255311726 39.0 35.0 41.0 30.0 41.0 36 36.28588872663115 39.0 35.0 41.0 30.0 41.0 37 36.239896132894074 39.0 35.0 40.0 30.0 41.0 38 35.98242632363276 39.0 35.0 40.0 29.0 41.0 39 35.903105546722756 38.0 35.0 40.0 29.0 41.0 40 35.67987599742824 38.0 35.0 40.0 27.0 41.0 41 35.595336945090985 38.0 35.0 40.0 27.0 41.0 42 35.5292138695481 38.0 35.0 40.0 27.0 41.0 43 35.49833284323742 38.0 34.0 40.0 27.0 41.0 44 35.307270199012166 38.0 34.0 40.0 26.0 41.0 45 35.1808154863662 38.0 34.0 40.0 26.0 41.0 46 35.049615980781596 38.0 34.0 40.0 26.0 41.0 47 34.87083896112958 37.0 34.0 40.0 25.0 41.0 48 34.79823665153184 37.0 34.0 40.0 24.0 41.0 49 34.6149540721986 37.0 34.0 40.0 24.0 41.0 50 34.40368618577459 37.0 33.0 40.0 24.0 41.0 51 32.17938008682174 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 18.0 10 15.0 11 13.0 12 7.0 13 12.0 14 13.0 15 24.0 16 40.0 17 64.0 18 111.0 19 185.0 20 289.0 21 475.0 22 637.0 23 920.0 24 1278.0 25 1707.0 26 2184.0 27 2694.0 28 3082.0 29 3594.0 30 4442.0 31 5257.0 32 6928.0 33 9484.0 34 14823.0 35 17684.0 36 19831.0 37 30176.0 38 36948.0 39 37695.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.2855647649284 17.83583614515478 22.03288460484148 15.845714485075332 2 30.165320148922703 25.713587950618265 25.602444166446535 18.51864773401249 3 31.97302645022702 25.51671891587462 26.092373941517437 16.41788069238092 4 28.749358306627258 25.085102247297414 26.60572863970973 19.5598108063656 5 26.25684680598681 29.067837580554322 24.061881669250056 20.61343394420881 6 26.180591205187376 34.467531561345886 24.998878594105893 14.352998639360848 7 60.861439087723845 28.046610612985383 6.9148379443882355 4.177112354902538 8 81.43101360140749 5.999770734794982 8.05119591708574 4.518019746711788 9 75.37193295487961 7.065355535508695 10.382224968974436 7.180486540637257 10 42.42104056498921 25.49130038227481 17.011478212329482 15.076180840406497 11 32.9145089986593 25.537651825897996 23.624782571857196 17.923056603585508 12 27.993281532687735 24.253268275178055 27.799402913661712 19.954047278472494 13 25.00236741244312 25.495786005851244 30.517690800982848 18.984155780722784 14 21.383465991497253 27.688259129489985 29.726725843671037 21.20154903534173 15 20.61094193111079 24.589191640791263 34.18045165245388 20.61941477564406 16 24.830916911299287 25.189766797414286 29.212872742859137 20.76644354842729 17 25.491798784894414 24.390328995569202 27.371275063421734 22.746597156114653 18 26.88184369097044 23.08451413220628 28.819134673371842 21.214507503451436 19 25.6697285200931 25.800310006429395 26.137728579901413 22.39223289357609 20 27.757038690995362 26.453715840730457 26.188067244481438 19.601178223792743 21 25.678699767245977 26.37197781111538 27.67231024566265 20.277012175975997 22 25.73452086064164 23.355146754651344 27.613000333929755 23.297332050777257 23 23.481242617411198 27.028374061134063 27.477933224017026 22.01245009743771 24 23.735926356028926 24.638533500132077 28.665128263914152 22.96041187992484 25 23.35115953369451 26.764220672743853 27.385728739390252 22.49889105417138 26 23.331721831529947 25.757447381143432 27.028374061134063 23.88245672619255 27 22.739619519440193 26.275287702912166 26.984514630608896 24.00057814703874 28 21.08193240663673 26.393409123758353 28.957192199002197 23.56746627060272 29 22.619006085495986 26.03555604288256 26.819044960900314 24.52639291072114 30 23.275402335514674 25.102546338983554 28.485204918237052 23.136846407264716 31 25.018316296270456 24.542840197168076 27.30548591763398 23.133357588927485 32 25.403581521224478 25.25256552748441 25.955811623745895 23.388041327545217 33 23.539555723904883 26.17760078946975 25.97225891019283 24.310584576432532 34 22.261153004620194 25.164348263814475 29.494968625555096 23.07953010601024 35 22.49639904107336 26.402380370911228 27.17041880772125 23.930801780294157 36 23.93478900125099 28.410444525296423 25.93637392158133 21.71839255187125 37 22.744603545636235 26.852936339033395 27.251160032097125 23.151300083233238 38 23.24848859405605 28.52806754352301 25.147900977367538 23.075542885053405 39 22.88714669484303 25.911453790601126 26.970060954640378 24.23133855991547 40 25.2630319824961 24.881255575879308 27.228233511595334 22.62747893002926 41 21.533485179998106 26.371479408495773 27.119083337902023 24.9759520736041 42 23.947249066741094 24.52639291072114 27.715671273568216 23.81068674896955 43 23.43887839474484 24.700833827582596 27.50235495237763 24.357932825294927 44 23.11591349724134 25.33928758329554 27.78046361411676 23.764335305346364 45 22.880667460788175 24.250776262080034 26.96557533106394 25.902980946067856 46 23.45532568119178 26.16364551612083 26.215977791179267 24.165051011508115 47 21.437293474414503 25.887032062240518 29.326508540128888 23.34916592321609 48 22.42612427170917 26.071441031494064 27.410648870370462 24.091785826426303 49 23.361127586086592 25.03326837485858 28.708489291819717 22.89711474723511 50 22.144526791632817 25.450431367467267 28.121371005926004 24.283670834973908 51 22.289561953937632 25.24359428033154 26.10333879914873 26.363504966582102 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 53.0 1 209.5 2 366.0 3 577.5 4 789.0 5 593.5 6 398.0 7 384.0 8 370.0 9 347.0 10 324.0 11 345.0 12 366.0 13 412.5 14 459.0 15 444.5 16 430.0 17 423.0 18 416.0 19 516.0 20 616.0 21 660.0 22 704.0 23 810.0 24 916.0 25 1041.0 26 1339.5 27 1513.0 28 1854.5 29 2196.0 30 2566.0 31 2936.0 32 3462.5 33 3989.0 34 4357.0 35 4725.0 36 5318.0 37 5911.0 38 6757.0 39 7603.0 40 8510.5 41 9418.0 42 10133.0 43 10848.0 44 11989.0 45 13130.0 46 15253.0 47 17376.0 48 17038.5 49 16701.0 50 16666.5 51 16632.0 52 15670.5 53 14709.0 54 13720.5 55 12732.0 56 11932.5 57 11133.0 58 10424.5 59 9716.0 60 9049.5 61 8383.0 62 7472.0 63 6561.0 64 5830.5 65 5100.0 66 4490.0 67 3880.0 68 3255.5 69 2631.0 70 2272.5 71 1914.0 72 1638.5 73 1363.0 74 1154.0 75 773.5 76 602.0 77 443.0 78 284.0 79 211.0 80 138.0 81 114.5 82 91.0 83 72.0 84 53.0 85 39.5 86 26.0 87 19.0 88 12.0 89 8.0 90 4.0 91 3.5 92 3.0 93 2.5 94 2.0 95 3.0 96 4.0 97 4.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 200641.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.51571214258302 #Duplication Level Percentage of deduplicated Percentage of total 1 68.52710413694722 32.56114154135994 2 10.912981455064195 10.370761708723542 3 6.020810606696316 8.582493109583785 4 4.037299655953679 7.67340673142578 5 2.6757992783418647 6.357125413051171 6 2.010782915163212 5.732626930687148 7 1.5209364773013343 5.058786588982311 8 1.1475203490811445 4.362019726775683 9 0.8548711924141982 3.655783214796577 >10 2.2677687337417134 13.694110376244137 >50 0.011538138793320466 0.3488818337229181 >100 0.010489217084836789 0.9419809510518786 >500 0.0020978434169673576 0.6608818735951276 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTC 685 0.34140579442885555 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCG 641 0.31947607916627213 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGC 421 0.20982750285335497 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 316 0.1574952277949173 No Hit GCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGC 231 0.11513100512856296 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07326518508181279 0.0 2 0.0 0.0 0.0 0.4301214607183975 0.0 3 0.0 0.0 0.0 0.5457508684665646 0.0 4 0.0 0.0 0.0 0.7909649573118156 0.0 5 0.0 0.0 0.0 1.6561919049446523 0.0 6 0.0 0.0 0.0 2.0997702363923625 0.0 7 0.0 0.0 0.0 2.532882112828385 0.0 8 0.0 0.0 0.0 3.359732058751701 0.0 9 0.0 0.0 0.0 3.659272033133806 0.0 10 0.0 0.0 0.0 4.654582064483331 0.0 11 0.0 0.0 0.0 5.335400042862625 0.0 12 0.0 0.0 0.0 6.190658938103379 0.0 13 0.0 0.0 0.0 6.453317118634776 0.0 14 0.0 0.0 0.0 6.583400202351464 0.0 15 0.0 0.0 0.0 6.799706939259673 0.0 16 0.0 0.0 0.0 7.185968969452904 0.0 17 0.0 0.0 0.0 7.586186272995051 0.0 18 0.0 0.0 0.0 8.073125632348324 0.0 19 0.0 0.0 0.0 8.349739086228638 0.0 20 0.0 0.0 0.0 8.621368513912909 0.0 21 0.0 0.0 0.0 8.99816089433366 0.0 22 0.0 0.0 0.0 9.368474040699558 0.0 23 0.0 0.0 0.0 9.733803160869414 0.0 24 0.0 0.0 0.0 10.04430799288281 0.0 25 0.0 0.0 0.0 10.328397486057186 0.0 26 0.0 0.0 0.0 10.595541290165022 0.0 27 0.0 0.0 0.0 10.892589251449106 0.0 28 0.0 0.0 0.0 11.157241042458919 0.0 29 0.0 0.0 0.0 11.445317756590129 0.0 30 0.0 0.0 0.0 11.831081384163754 0.0 31 0.0 0.0 0.0 12.112678864240111 0.0 32 0.0 0.0 0.0 12.41271724124182 0.0 33 0.0 0.0 0.0 12.702289163231843 0.0 34 0.0 0.0 0.0 13.004819553331572 0.0 35 0.0 0.0 0.0 13.322302022019429 0.0 36 4.984026196041686E-4 0.0 0.0 13.619349983303513 0.0 37 4.984026196041686E-4 0.0 0.0 13.892474618846597 0.0 38 9.968052392083373E-4 0.0 0.0 14.227899581840202 0.0 39 9.968052392083373E-4 0.0 0.0 14.736768656456059 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATGC 20 7.019354E-4 45.0 11 GCGCCAA 20 7.019354E-4 45.0 1 TCGATCA 20 7.019354E-4 45.0 17 CTAACGG 25 3.8792616E-5 45.0 2 GACGGGA 40 6.7666406E-9 45.0 4 GCGATAT 25 3.8792616E-5 45.0 9 TCGTAGG 20 7.019354E-4 45.0 2 TAGGCGA 20 7.019354E-4 45.0 6 CGATCAG 20 7.019354E-4 45.0 18 AATACGG 20 7.019354E-4 45.0 2 TAACGGG 45 1.9146682E-8 40.0 3 TGGGCGA 130 0.0 39.807693 6 CACGAGC 40 3.4392178E-7 39.375 41 ATGCGGG 40 3.4392178E-7 39.375 3 AGGCGAT 75 0.0 39.0 7 GGCGATA 75 0.0 39.0 8 ACACGGG 35 6.222537E-6 38.57143 3 CACGTGA 100 0.0 38.25 43 TGATACC 95 0.0 37.894737 4 ACACGAC 115 0.0 37.173916 26 >>END_MODULE