SRR2936513.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936513.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	197756
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	333	0.16838932826311212	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	221	0.1117538785169603	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGACGAG	20	7.0191117E-4	45.0	2
GTTAACG	20	7.0191117E-4	45.0	1
GCGATGC	40	6.7666406E-9	45.0	9
TTAACGG	25	3.8790597E-5	45.0	2
TAGGCGA	25	3.8790597E-5	45.0	6
CGTTTGG	20	7.0191117E-4	45.0	2
ACACGAC	55	1.8189894E-12	44.999996	26
CACGACC	55	1.8189894E-12	44.999996	27
AGGCGAT	55	1.8189894E-12	44.999996	7
CGACCAA	60	3.6379788E-12	41.249996	29
GGCCGAT	40	3.4388904E-7	39.375	8
CCTGGGA	40	3.4388904E-7	39.375	4
ATACGAA	40	3.4388904E-7	39.375	19
GGCCTAT	40	3.4388904E-7	39.375	8
GCACGGG	70	0.0	38.571426	3
GCGATGA	70	0.0	38.571426	9
GCGAGAC	65	9.094947E-12	38.076927	21
CGAGACA	65	9.094947E-12	38.076927	22
CCGGGAT	30	1.1365073E-4	37.499996	5
CGAGATA	85	0.0	37.058823	19