##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936513.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 197756 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27263395295212 33.0 31.0 34.0 31.0 34.0 2 32.400695806954026 34.0 31.0 34.0 31.0 34.0 3 32.325284694269705 34.0 31.0 34.0 30.0 34.0 4 36.0136835291976 37.0 35.0 37.0 35.0 37.0 5 36.058430591233645 37.0 35.0 37.0 35.0 37.0 6 36.027908129209735 37.0 35.0 37.0 35.0 37.0 7 26.616466757013693 37.0 8.0 37.0 0.0 37.0 8 31.122929266368658 37.0 19.0 37.0 17.0 37.0 9 36.087567507433405 39.0 32.0 39.0 32.0 39.0 10 36.915466534517286 38.0 37.0 39.0 34.0 39.0 11 37.29275976455835 39.0 37.0 39.0 34.0 39.0 12 37.33679888347256 39.0 37.0 39.0 35.0 39.0 13 37.291075871275716 39.0 37.0 39.0 35.0 39.0 14 38.56002346325775 40.0 38.0 41.0 35.0 41.0 15 38.62323267056372 40.0 38.0 41.0 35.0 41.0 16 38.57258439693359 40.0 38.0 41.0 35.0 41.0 17 38.49501911446429 40.0 38.0 41.0 34.0 41.0 18 38.40487772810939 40.0 38.0 41.0 34.0 41.0 19 38.301118550132486 40.0 37.0 41.0 34.0 41.0 20 38.34537005198325 40.0 37.0 41.0 34.0 41.0 21 38.29305811201683 40.0 37.0 41.0 34.0 41.0 22 38.27126357733773 40.0 37.0 41.0 34.0 41.0 23 38.2117205040555 40.0 37.0 41.0 34.0 41.0 24 38.15610145836283 40.0 37.0 41.0 34.0 41.0 25 38.0438166225045 40.0 37.0 41.0 34.0 41.0 26 37.93861121786444 40.0 37.0 41.0 34.0 41.0 27 37.79435769331904 40.0 36.0 41.0 33.0 41.0 28 37.75116810615101 40.0 36.0 41.0 33.0 41.0 29 37.74104451950889 40.0 36.0 41.0 33.0 41.0 30 37.680697425109734 40.0 36.0 41.0 33.0 41.0 31 37.58283440199033 40.0 36.0 41.0 33.0 41.0 32 37.4579431218269 40.0 36.0 41.0 33.0 41.0 33 37.37566496086086 40.0 36.0 41.0 33.0 41.0 34 37.25219968041425 40.0 35.0 41.0 32.0 41.0 35 37.17900341835393 40.0 35.0 41.0 32.0 41.0 36 37.03477012075487 40.0 35.0 41.0 32.0 41.0 37 36.986847428143776 40.0 35.0 41.0 31.0 41.0 38 36.88000869758692 39.0 35.0 41.0 31.0 41.0 39 36.84051052812557 39.0 35.0 41.0 31.0 41.0 40 36.62359675559781 39.0 35.0 41.0 31.0 41.0 41 36.55978579663828 39.0 35.0 41.0 31.0 41.0 42 36.475970387750564 39.0 35.0 41.0 30.0 41.0 43 36.42889722688566 39.0 35.0 41.0 30.0 41.0 44 36.25972410445195 39.0 35.0 40.0 30.0 41.0 45 36.18375675074334 39.0 35.0 40.0 30.0 41.0 46 36.059057626570116 38.0 35.0 40.0 30.0 41.0 47 35.928942737514916 38.0 35.0 40.0 29.0 41.0 48 35.830953295980905 38.0 35.0 40.0 29.0 41.0 49 35.71410222698679 38.0 35.0 40.0 28.0 41.0 50 35.52254798843018 38.0 34.0 40.0 28.0 41.0 51 33.509719047715365 36.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 22.0 10 27.0 11 13.0 12 6.0 13 6.0 14 14.0 15 20.0 16 28.0 17 47.0 18 72.0 19 109.0 20 178.0 21 296.0 22 466.0 23 641.0 24 905.0 25 1249.0 26 1512.0 27 1765.0 28 2089.0 29 2473.0 30 3017.0 31 3889.0 32 5328.0 33 7875.0 34 13047.0 35 16999.0 36 18155.0 37 30231.0 38 40118.0 39 47141.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.406581848338355 18.661886365015473 24.368413600598718 15.563118186047454 2 29.685572119177166 25.835372883755742 26.511458565100426 17.967596431966665 3 33.00228564493619 24.353243390845282 26.27176925099618 16.372701713222355 4 30.333340075648778 25.858128198385888 25.137543235097798 18.670988490867536 5 26.243957199781548 30.637755618034348 23.873864762636785 19.244422419547323 6 27.285139262525536 36.06666801512976 23.25643722567204 13.391755496672667 7 61.318493497036755 29.362446651429035 5.4607698375776215 3.858290013956593 8 84.6512874451344 5.388458504419588 6.474645522765428 3.485608527680576 9 77.99712777362001 8.565100426788568 8.316308986832258 5.121462812759157 10 43.65430126013876 27.16226056352273 15.10952891441979 14.073909261918729 11 34.37266125932968 27.136471206941888 21.43095531867554 17.059912215052893 12 31.872610691963832 24.111025708448796 25.245251724347174 18.771111875240194 13 25.231598535569084 26.733449301159002 26.5630372782621 21.47191488500981 14 20.92932704949534 29.83575719573616 26.810817370901514 22.42409838386699 15 20.221889601326886 27.370092437144766 32.47486801917515 19.933149942353204 16 23.652379700236654 24.63035255567467 31.870082323671596 19.84718542041708 17 23.069337972046362 24.969659580493133 28.120512146281275 23.840490301179234 18 23.718117275834867 26.42144865389672 27.11270454499484 22.74772952527357 19 26.347114626104894 27.25227047472643 25.56332045551083 20.837294443657843 20 29.58999979773054 25.345375108719836 25.781771475960273 19.282853617589353 21 26.875543599182834 26.217156495883813 25.23817229312891 21.669127611804445 22 24.77800926394142 25.943081373005118 25.9471267622727 23.33178260078076 23 25.363579360423955 26.849248568943544 26.732943627500553 21.05422844313194 24 24.729464592730434 24.73300430833957 28.60949857400028 21.928032524929712 25 23.96438034749894 26.607030886547058 26.671757114828377 22.75683165112563 26 23.300430833956998 29.088877202208785 26.294524565626325 21.31616739820789 27 24.17221222112098 28.56297659742309 26.489208924128725 20.77560225732721 28 21.94219138736625 28.96144744027994 28.050223507757032 21.046137664596777 29 23.40004854467121 27.050506685005764 27.921276724852852 21.628168045470176 30 23.41825279637533 26.950888974291555 27.586520762960415 22.044337466372703 31 24.98381844292967 26.815368433827548 25.933979247153054 22.266833876089727 32 25.577479317947372 28.17006816480916 25.427294241388378 20.825158275855095 33 25.387346022371005 27.838346244867413 25.501122595521753 21.27318513723983 34 23.753008758267764 27.861101559497563 27.059608810857828 21.32628087137685 35 24.267784542567608 26.240923157830863 26.790590424563604 22.700701875037925 36 23.780315135823944 28.759683650559275 25.77418637108356 21.685814842533222 37 23.935051275308965 29.609215396751555 25.80503246424887 20.65070086369061 38 24.02860090212181 28.38396812233257 24.99544893707397 22.591982038471652 39 25.38987439066324 26.311211796355106 25.993143065191447 22.305770747790206 40 24.768401464430916 26.359250793907645 27.652258338558628 21.22008940310281 41 21.817289993729645 27.642144865389675 27.794352636582452 22.746212504298228 42 23.0263557110783 28.081069600922348 26.573656425089503 22.318918262909847 43 24.29256255183155 26.901332955763667 26.76884645725035 22.037258035154434 44 23.250874815429114 27.875766095592546 26.51095289144198 22.36240619753636 45 22.76795647161148 26.91245777624952 26.048261493962254 24.271324258176744 46 22.331560104371043 28.455773781832157 26.198952244179697 23.013713869617103 47 23.54871660025486 26.878577641133518 27.99915046825381 21.573555290357817 48 23.371730819798135 25.861162240336576 27.639616497097435 23.127490442767858 49 22.48730759117296 27.10360241914278 27.578429984425252 22.830660005259006 50 20.987985193875282 27.173385384008576 27.519266166386863 24.319363255729282 51 21.319707113817028 26.732943627500553 26.83053864358098 25.116810615101436 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 66.0 1 246.5 2 427.0 3 655.0 4 883.0 5 659.0 6 435.0 7 377.5 8 320.0 9 326.5 10 333.0 11 364.0 12 395.0 13 412.5 14 430.0 15 465.5 16 501.0 17 506.0 18 511.0 19 565.0 20 619.0 21 647.0 22 675.0 23 789.0 24 903.0 25 1231.0 26 1813.5 27 2068.0 28 2663.0 29 3258.0 30 3801.0 31 4344.0 32 4675.5 33 5007.0 34 5414.0 35 5821.0 36 6170.0 37 6519.0 38 7416.5 39 8314.0 40 9087.5 41 9861.0 42 10437.5 43 11014.0 44 11791.5 45 12569.0 46 13321.0 47 14073.0 48 13943.0 49 13813.0 50 13514.5 51 13216.0 52 12584.0 53 11952.0 54 11375.0 55 10798.0 56 10685.5 57 10573.0 58 10493.5 59 10414.0 60 10540.0 61 10666.0 62 9595.0 63 8524.0 64 7226.5 65 5929.0 66 4898.5 67 3868.0 68 3214.0 69 2560.0 70 2096.0 71 1632.0 72 1406.0 73 1180.0 74 990.5 75 638.0 76 475.0 77 350.5 78 226.0 79 164.5 80 103.0 81 76.5 82 50.0 83 41.5 84 33.0 85 22.5 86 12.0 87 10.5 88 9.0 89 6.5 90 4.0 91 4.5 92 5.0 93 3.5 94 2.0 95 2.0 96 2.0 97 2.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 197756.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.35016889500192 #Duplication Level Percentage of deduplicated Percentage of total 1 63.03761194029851 26.696535124092314 2 11.771940298507463 9.970873197273407 3 6.906268656716417 8.774449321385951 4 4.765373134328358 8.072574283460426 5 3.4388059701492537 7.281700681648092 6 2.515820895522388 6.392726390096887 7 1.964179104477612 5.822832177026235 8 1.422089552238806 4.818058617690487 9 1.106865671641791 4.218835332429863 >10 3.0376119402985076 16.50771658002791 >50 0.020298507462686566 0.5683771920953093 >100 0.013134328358208954 0.8753211027731144 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 333 0.16838932826311212 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 221 0.1117538785169603 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02932907218997148 0.0 2 0.0 0.0 0.0 0.14563401363296183 0.0 3 0.0 0.0 0.0 0.2073261999635915 0.0 4 0.0 0.0 0.0 0.292785048241267 0.0 5 0.0 0.0 0.0 0.6037743481866542 0.0 6 0.0 0.0 0.0 0.8085721798580069 0.0 7 0.0 0.0 0.0 1.0017395173850603 0.0 8 0.0 0.0 0.0 1.40577277048484 0.0 9 0.0 0.0 0.0 1.5746677724063998 0.0 10 0.0 0.0 0.0 2.000444992819434 0.0 11 0.0 0.0 0.0 2.463642063957604 0.0 12 0.0 0.0 0.0 2.8964987155889075 0.0 13 0.0 0.0 0.0 3.056797265316855 0.0 14 0.0 0.0 0.0 3.1129270414045593 0.0 15 0.0 0.0 0.0 3.2332773721151318 0.0 16 0.0 0.0 0.0 3.466898602318008 0.0 17 0.0 0.0 0.0 3.7222637998341392 0.0 18 0.0 0.0 0.0 4.001395659297316 0.0 19 0.0 0.0 0.0 4.174841724144906 0.0 20 0.0 0.0 0.0 4.355872893869212 0.0 21 0.0 0.0 0.0 4.571289872367968 0.0 22 0.0 0.0 0.0 4.815024575739801 0.0 23 0.0 0.0 0.0 5.049657153259572 0.0 24 0.0 0.0 0.0 5.242824490786626 0.0 25 0.0 0.0 0.0 5.420821618560246 0.0 26 0.0 0.0 0.0 5.571006695119237 0.0 27 0.0 0.0 0.0 5.725237160945812 0.0 28 0.0 0.0 0.0 5.899694573110297 0.0 29 0.0 0.0 0.0 6.100447015514068 0.0 30 0.0 0.0 0.0 6.330528530107809 0.0 31 0.0 0.0 0.0 6.5398774247051925 0.0 32 0.0 0.0 0.0 6.757317097837739 0.0 33 0.0 0.0 0.0 6.961103582192196 0.0 34 0.0 0.0 0.0 7.171463824106475 0.0 35 0.0 0.0 0.0 7.377778676753171 0.0 36 0.0 0.0 0.0 7.616456643540524 0.0 37 5.056736584477841E-4 0.0 0.0 7.82985092740549 0.0 38 5.056736584477841E-4 0.0 0.0 8.044762232245798 0.0 39 5.056736584477841E-4 0.0 0.0 8.278889136107122 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGACGAG 20 7.0191117E-4 45.0 2 GTTAACG 20 7.0191117E-4 45.0 1 GCGATGC 40 6.7666406E-9 45.0 9 TTAACGG 25 3.8790597E-5 45.0 2 TAGGCGA 25 3.8790597E-5 45.0 6 CGTTTGG 20 7.0191117E-4 45.0 2 ACACGAC 55 1.8189894E-12 44.999996 26 CACGACC 55 1.8189894E-12 44.999996 27 AGGCGAT 55 1.8189894E-12 44.999996 7 CGACCAA 60 3.6379788E-12 41.249996 29 GGCCGAT 40 3.4388904E-7 39.375 8 CCTGGGA 40 3.4388904E-7 39.375 4 ATACGAA 40 3.4388904E-7 39.375 19 GGCCTAT 40 3.4388904E-7 39.375 8 GCACGGG 70 0.0 38.571426 3 GCGATGA 70 0.0 38.571426 9 GCGAGAC 65 9.094947E-12 38.076927 21 CGAGACA 65 9.094947E-12 38.076927 22 CCGGGAT 30 1.1365073E-4 37.499996 5 CGAGATA 85 0.0 37.058823 19 >>END_MODULE