SRR2936509.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936509.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	224762
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	365	0.16239399898559367	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGATCGT	20	7.021165E-4	45.000004	28
TAGACGG	20	7.021165E-4	45.000004	2
ACCGATA	30	2.1576852E-6	45.000004	10
CACGACC	20	7.021165E-4	45.000004	27
ACCTCGA	20	7.021165E-4	45.000004	28
ATCGTGA	20	7.021165E-4	45.000004	30
GTTGTAG	30	2.1576852E-6	45.000004	1
GTATACG	20	7.021165E-4	45.000004	1
TCAACGG	20	7.021165E-4	45.000004	2
ACGGGTA	25	3.880763E-5	45.0	5
ATGGGAC	130	0.0	39.80769	5
GACCGAT	130	0.0	39.80769	9
TATACGG	40	3.4416917E-7	39.375004	2
TCGCGGG	40	3.4416917E-7	39.375004	3
GGACCGA	150	0.0	39.0	8
CATGCGG	35	6.225886E-6	38.571426	2
GCGATAA	35	6.225886E-6	38.571426	9
TCGTACG	35	6.225886E-6	38.571426	30
ACCGGCG	30	1.1370021E-4	37.500004	20
CACGCCA	30	1.1370021E-4	37.500004	27