SRR2936507.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936507.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	244677
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1808	0.7389333692991168	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCGTCTTC	776	0.31715281779652355	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGCCG	631	0.2578910155020701	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTACTCCTCGTATGC	399	0.16307213183094446	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	322	0.13160207130216572	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTCC	55	6.002665E-11	40.909092	37
TACTGAC	55	6.002665E-11	40.909092	20
CGTTTTA	150	0.0	40.500004	1
CGTTTTT	590	0.0	40.042374	1
CGGGTAT	40	3.443365E-7	39.375	6
GTTTGCG	35	6.228149E-6	38.571426	1
CACAACG	35	6.228149E-6	38.571426	12
ATTGCGG	35	6.228149E-6	38.571426	2
CGCGGGT	30	1.1372972E-4	37.499996	4
ATTCGGG	30	1.1372972E-4	37.499996	3
TACGAAT	60	1.546141E-10	37.499996	12
TCGTCCC	60	1.546141E-10	37.499996	38
GTCGTAG	30	1.1372972E-4	37.499996	1
CGAATAT	60	1.546141E-10	37.499996	14
GCGATCT	30	1.1372972E-4	37.499996	9
ACGTAAG	30	1.1372972E-4	37.499996	2
GCTACGA	60	1.546141E-10	37.499996	10
TAAGCGG	30	1.1372972E-4	37.499996	2
TTACACG	105	0.0	36.42857	34
CACGGGT	25	0.0021038747	36.000004	4