##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936505.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 154597 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95563950141335 33.0 31.0 34.0 30.0 34.0 2 32.07479446561059 33.0 31.0 34.0 30.0 34.0 3 31.995148676882476 33.0 31.0 34.0 30.0 34.0 4 35.75320349036527 37.0 35.0 37.0 35.0 37.0 5 35.83296571084821 37.0 35.0 37.0 35.0 37.0 6 35.803081560444255 37.0 35.0 37.0 35.0 37.0 7 26.885224163470184 35.0 10.0 37.0 0.0 37.0 8 31.224752097388695 36.0 19.0 37.0 17.0 37.0 9 35.99262598886136 39.0 32.0 39.0 32.0 39.0 10 36.677529318162705 38.0 35.0 39.0 33.0 39.0 11 37.00679832079536 39.0 37.0 39.0 34.0 39.0 12 37.052129084005514 39.0 37.0 39.0 34.0 39.0 13 36.98873846193652 39.0 37.0 39.0 33.0 39.0 14 38.1104807984631 40.0 37.0 41.0 33.0 41.0 15 38.182442091373055 40.0 37.0 41.0 33.0 41.0 16 38.14470526594953 40.0 37.0 41.0 33.0 41.0 17 38.072375272482645 40.0 37.0 41.0 33.0 41.0 18 38.005103591919635 40.0 37.0 41.0 33.0 41.0 19 37.88087737795688 40.0 36.0 41.0 33.0 41.0 20 37.941700032989 40.0 36.0 41.0 33.0 41.0 21 37.8431793631183 40.0 36.0 41.0 33.0 41.0 22 37.83371604882372 40.0 36.0 41.0 33.0 41.0 23 37.770868774943885 39.0 36.0 41.0 33.0 41.0 24 37.74183198897779 40.0 36.0 41.0 33.0 41.0 25 37.57859466871932 39.0 36.0 41.0 33.0 41.0 26 37.39298951467364 39.0 35.0 41.0 32.0 41.0 27 37.24040569998124 39.0 35.0 41.0 32.0 41.0 28 37.18094141542203 39.0 35.0 41.0 32.0 41.0 29 37.11795830449491 39.0 35.0 41.0 32.0 41.0 30 37.02584138113935 39.0 35.0 41.0 31.0 41.0 31 36.82257094251506 39.0 35.0 41.0 31.0 41.0 32 36.68621642075849 39.0 35.0 41.0 30.0 41.0 33 36.56847804291157 39.0 35.0 41.0 30.0 41.0 34 36.46909060331054 39.0 35.0 41.0 30.0 41.0 35 36.43870191530237 39.0 35.0 41.0 30.0 41.0 36 36.317794006352 39.0 35.0 40.0 30.0 41.0 37 36.280425881485414 39.0 35.0 40.0 30.0 41.0 38 36.105377206543466 38.0 35.0 40.0 30.0 41.0 39 36.09698765176556 38.0 35.0 40.0 30.0 41.0 40 35.885049515837956 38.0 35.0 40.0 29.0 41.0 41 35.80050065654573 38.0 35.0 40.0 28.0 41.0 42 35.70481315937567 38.0 35.0 40.0 28.0 41.0 43 35.66742562921661 38.0 35.0 40.0 28.0 41.0 44 35.405551207332614 38.0 34.0 40.0 27.0 41.0 45 35.33065324682885 38.0 34.0 40.0 27.0 41.0 46 35.189512086262994 38.0 34.0 40.0 26.0 41.0 47 35.06969734212178 38.0 34.0 40.0 26.0 41.0 48 35.03315070796975 38.0 34.0 40.0 26.0 41.0 49 34.85521064444976 37.0 34.0 40.0 24.0 41.0 50 34.560204919888484 37.0 33.0 40.0 24.0 41.0 51 32.135714147105055 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 3.0 10 8.0 11 11.0 12 3.0 13 7.0 14 7.0 15 9.0 16 14.0 17 30.0 18 59.0 19 115.0 20 163.0 21 265.0 22 404.0 23 630.0 24 920.0 25 1211.0 26 1570.0 27 1953.0 28 2310.0 29 2754.0 30 3281.0 31 4271.0 32 5325.0 33 7558.0 34 11755.0 35 14806.0 36 15151.0 37 23149.0 38 28286.0 39 28556.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.16444691682245 19.690550269410142 23.453883322444806 15.691119491322599 2 28.147376727879585 25.697781975070665 27.87570263329819 18.27913866375156 3 31.195301331849905 24.581977658039936 28.029004443811978 16.193716566298182 4 28.761877656099404 26.208788010116624 26.306461315549463 18.722873018234505 5 24.783792699728973 29.671339029864747 25.799336338997524 19.74553193140876 6 26.2100816962813 34.688900819550184 25.259222365246416 13.841795118922102 7 61.58981092776703 27.833657832946308 6.44126341390842 4.135267825378241 8 83.20148515171705 4.611991177060356 7.619811509925807 4.566712161296791 9 77.32232837635918 6.916046236343526 9.995019308266007 5.766606079031288 10 42.44066831827267 26.959125985627146 16.57276661254746 14.02743908355272 11 32.22766289125921 25.276687128469504 23.992056766948906 18.503593213322382 12 29.364735408837173 23.03990374974935 28.071696087246195 19.523664754167285 13 24.43967217992587 26.26441651519758 30.0199874512442 19.27592385363235 14 20.592896369269777 29.223076773805438 28.768346086922776 21.415680770002005 15 18.759743073927694 26.26765073060926 36.306008525391825 18.666597670071216 16 22.118152357419614 24.362051010045473 33.254202862927485 20.26559376960743 17 21.636254261078804 24.525702309876646 28.616984805656 25.221058623388554 18 23.330336293718506 24.746275800953445 30.283899428837557 21.639488476490488 19 24.630490889215185 27.01863554920212 26.832344741489162 21.518528820093533 20 27.22756586479686 26.075538335155272 26.908025382122553 19.788870417925317 21 24.49853490041851 26.96688810261519 27.97208225256635 20.562494744399956 22 22.779872830650014 25.336196692044478 26.79029994113728 25.09363053616823 23 21.578038383668506 27.63507700666895 27.598853794058098 23.188030815604442 24 22.510139265315626 24.666714101826038 29.505100357704222 23.31804627515411 25 21.62331739943207 26.804530488948686 27.99342807428346 23.578724037335782 26 20.07994980497681 28.508962010905776 28.578174220715795 22.83291396340162 27 21.912456257236556 28.021242326823938 27.97725699722504 22.089044418714465 28 19.7532940483968 27.216569532397134 30.319475798366074 22.710660620839988 29 21.005582255800565 24.84847700796264 30.41262120222255 23.733319534014242 30 21.737808625005663 24.950031371889494 29.195909364347305 24.116250638757545 31 22.62333680472454 25.970749755816737 26.832344741489162 24.57356869796956 32 23.181562384781078 25.664146134789164 28.380887080603117 22.773404399826646 33 22.521782440797686 26.048370925697135 27.389276635381023 24.040569998124155 34 20.221608440008538 24.838774361727587 31.148728629921667 23.790888568342204 35 19.475151522992036 25.098805280826923 29.71726488871065 25.708778307470393 36 21.451257139530522 25.673201937941876 28.812978259604005 24.0625626629236 37 20.87491995316856 26.171917954423435 28.742472363629307 24.210689728778696 38 19.984863871873323 26.877623757252728 28.113740887598077 25.02377148327587 39 21.41826814233135 24.49465384192449 28.460448779730523 25.62662923601364 40 22.70483903309896 23.019851614196913 30.543283504854557 23.73202584784957 41 18.75327464310433 24.570334482557875 29.456587126528976 27.219803747808818 42 21.568335737433454 24.327768326681632 29.588543115325656 24.51535282055926 43 22.41893439070616 24.111075894098853 28.032885502305994 25.437104212888993 44 20.87103889467454 25.86725486264287 28.554887869751678 24.70681837293091 45 20.526271531789103 25.23140811270594 27.619552772692874 26.622767582812084 46 21.922805746553944 25.49596693338163 27.90675110125035 24.67447621881408 47 19.70866187571557 25.094924222332903 30.175229791005 25.021184110946525 48 21.131069813773877 23.54444135397194 29.237954164699186 26.086534667555 49 21.131716656856213 23.055427983725426 30.162939772440605 25.649915586977755 50 19.22288272088074 24.485598038771776 29.849867720589664 26.44165151975782 51 19.12068151387155 24.897637082220225 27.487596783896194 28.494084620012032 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 98.0 1 195.0 2 292.0 3 473.0 4 654.0 5 467.0 6 280.0 7 263.5 8 247.0 9 240.0 10 233.0 11 244.0 12 255.0 13 239.0 14 223.0 15 251.0 16 279.0 17 265.0 18 251.0 19 295.0 20 339.0 21 424.5 22 510.0 23 538.0 24 566.0 25 714.5 26 1082.0 27 1301.0 28 1622.0 29 1943.0 30 2309.5 31 2676.0 32 3045.0 33 3414.0 34 3755.5 35 4097.0 36 4585.0 37 5073.0 38 5385.5 39 5698.0 40 6851.5 41 8005.0 42 8860.5 43 9716.0 44 10700.5 45 11685.0 46 13099.0 47 14513.0 48 15011.0 49 15509.0 50 14804.0 51 14099.0 52 12416.5 53 10734.0 54 9572.5 55 8411.0 56 7629.0 57 6847.0 58 6699.5 59 6552.0 60 6305.0 61 6058.0 62 5301.0 63 4544.0 64 3774.5 65 3005.0 66 2469.5 67 1934.0 68 1601.0 69 1268.0 70 1143.0 71 1018.0 72 816.0 73 614.0 74 486.5 75 266.5 76 174.0 77 144.5 78 115.0 79 92.5 80 70.0 81 50.5 82 31.0 83 25.5 84 20.0 85 18.0 86 16.0 87 10.5 88 5.0 89 3.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 154597.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.06567397814964 #Duplication Level Percentage of deduplicated Percentage of total 1 72.06318242849544 36.799549797214695 2 10.201910166442884 10.419348370278854 3 5.184556532313227 7.942586208011798 4 3.292123730144656 6.724580683971876 5 2.3446406404377678 5.98653272702575 6 1.7264965926076052 5.289882727349172 7 1.308489347148684 4.677322328376359 8 1.0564183112507284 4.315737045350168 9 0.7448129100904416 3.423093591725583 >10 2.0634357662199476 13.447867681779076 >50 0.005066754490411167 0.1778818476425804 >100 0.008866820358219542 0.7956169912740868 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 279 0.180469219971927 No Hit CCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 251 0.16235761366650064 TruSeq Adapter, Index 16 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTCTCTCTCTCGTATGCCGTCTTCTGC 199 0.12872177338499455 TruSeq Adapter, Index 16 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12807493030265787 0.0 2 0.0 0.0 0.0 0.701177901252935 0.0 3 0.0 0.0 0.0 0.9450377432938544 0.0 4 0.0 0.0 0.0 1.2341766010983395 0.0 5 0.0 0.0 0.0 2.2438986526258593 0.0 6 0.0 0.0 0.0 2.8687490701630693 0.0 7 0.0 0.0 0.0 3.492952644617942 0.0 8 0.0 0.0 0.0 4.871375253077356 0.0 9 0.0 0.0 0.0 5.375266014217611 0.0 10 0.0 0.0 0.0 6.526646700776858 0.0 11 0.0 0.0 0.0 7.763410674204545 0.0 12 0.0 0.0 0.0 8.853988111024147 0.0 13 0.0 0.0 0.0 9.260205566731567 0.0 14 0.0 0.0 0.0 9.41997580806872 0.0 15 0.0 0.0 0.0 9.71817046902592 0.0 16 0.0 0.0 0.0 10.306150830869939 0.0 17 0.0 0.0 0.0 11.012503476781568 0.0 18 0.0 0.0 0.0 11.877332677865677 0.0 19 0.0 0.0 0.0 12.332063364748345 0.0 20 0.0 0.0 0.0 12.803611971771767 0.0 21 0.0 0.0 0.0 13.432343447802998 0.0 22 0.0 0.0 0.0 14.072718099316287 0.0 23 0.0 0.0 0.0 14.727323298640982 0.0 24 0.0 0.0 0.0 15.232507745945911 0.0 25 0.0 0.0 0.0 15.660717866452778 0.0 26 0.0 0.0 0.0 16.118035925664792 0.0 27 0.0 0.0 0.0 16.53848392918362 0.0 28 0.0 0.0 0.0 16.932411366326644 0.0 29 0.0 0.0 0.0 17.402019444103054 0.0 30 0.0 0.0 0.0 17.92272812538406 0.0 31 0.0 0.0 0.0 18.409800966383564 0.0 32 0.0 0.0 0.0 18.9026953951241 0.0 33 0.0 0.0 0.0 19.3315523587133 0.0 34 0.0 0.0 0.0 19.719658208115295 0.0 35 0.0 0.0 0.0 20.20543736295012 0.0 36 0.0 0.0 0.0 20.65111224668008 0.0 37 0.0 0.0 0.0 21.123307696785837 0.0 38 0.0 0.0 0.0 21.55927993428074 0.0 39 0.0 0.0 0.0 22.106509181937554 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAGGA 25 3.8750997E-5 45.000004 4 GGCATAT 25 3.8750997E-5 45.000004 8 GGAATCC 40 6.7484507E-9 45.0 8 TGAACCG 20 7.0143293E-4 45.0 1 TAGGGCG 35 1.202825E-7 45.0 5 AAACACG 20 7.0143293E-4 45.0 40 CGAGACA 20 7.0143293E-4 45.0 22 CACCGGG 20 7.0143293E-4 45.0 3 GGCGATT 70 0.0 41.785713 8 AGGCGAT 55 6.002665E-11 40.909092 7 GTAAGGA 45 1.909757E-8 40.000004 4 GTAGGGT 40 3.4323966E-7 39.375 4 CGGGCAC 40 3.4323966E-7 39.375 6 CGGTAGG 40 3.4323966E-7 39.375 31 GTGTAAG 35 6.213264E-6 38.571426 1 CGTTTTA 35 6.213264E-6 38.571426 1 GACCGAT 90 0.0 37.500004 9 GGGACCG 90 0.0 37.500004 7 ATCCTGC 30 1.13535636E-4 37.499996 20 GGCACCG 30 1.13535636E-4 37.499996 8 >>END_MODULE