SRR2936503.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936503.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	74589
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	125	0.16758503264556435	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCG	122	0.16356299186207082	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGC	110	0.14747482872809664	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTC	97	0.13004598533295794	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTGTAC	20	6.990873E-4	45.000004	8
CTGTACA	20	6.990873E-4	45.000004	16
CGACGTG	20	6.990873E-4	45.000004	15
TGTATAG	20	6.990873E-4	45.000004	2
AGGGTAC	20	6.990873E-4	45.000004	6
TAACGGG	35	1.19161996E-7	45.000004	3
CCTGTAC	20	6.990873E-4	45.000004	15
CAAATTG	20	6.990873E-4	45.000004	41
TATACGG	20	6.990873E-4	45.000004	2
CGTTTTA	35	1.19161996E-7	45.000004	1
GAGATTT	20	6.990873E-4	45.000004	9
CGCGGGC	25	3.8556936E-5	45.0	4
CGGGACC	25	3.8556936E-5	45.0	6
GGCGATA	50	1.0531949E-9	40.5	8
TACGGGG	40	3.4005825E-7	39.375004	4
AGGCGAT	40	3.4005825E-7	39.375004	7
GAGCTAG	35	6.1700484E-6	38.57143	45
CGGGCGA	35	6.1700484E-6	38.57143	6
GACGGGA	35	6.1700484E-6	38.57143	4
AACTTAA	130	0.0	38.07692	45