##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936502.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 183075 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08569711866721 33.0 31.0 34.0 30.0 34.0 2 32.21166734944695 33.0 31.0 34.0 30.0 34.0 3 32.14033046565615 33.0 31.0 34.0 30.0 34.0 4 35.85096272019664 37.0 35.0 37.0 35.0 37.0 5 35.90496244708453 37.0 35.0 37.0 35.0 37.0 6 35.86795029359552 37.0 35.0 37.0 35.0 37.0 7 26.672942783012427 36.0 10.0 37.0 0.0 37.0 8 31.090848013109383 36.0 19.0 37.0 17.0 37.0 9 35.979762392462106 39.0 32.0 39.0 32.0 39.0 10 36.71515499112385 38.0 35.0 39.0 33.0 39.0 11 37.05946196913833 39.0 37.0 39.0 34.0 39.0 12 37.09097364468114 39.0 37.0 39.0 34.0 39.0 13 37.04452273658337 39.0 37.0 39.0 33.0 39.0 14 38.234412126177794 40.0 37.0 41.0 33.0 41.0 15 38.34010651372388 40.0 37.0 41.0 34.0 41.0 16 38.26848013109382 40.0 37.0 41.0 34.0 41.0 17 38.19581592243616 40.0 37.0 41.0 34.0 41.0 18 38.10040147480541 40.0 37.0 41.0 33.0 41.0 19 37.99257135053939 40.0 37.0 41.0 34.0 41.0 20 38.051350539396424 40.0 37.0 41.0 34.0 41.0 21 37.96073740270381 40.0 36.0 41.0 33.0 41.0 22 37.949709135600166 40.0 36.0 41.0 33.0 41.0 23 37.90228048613956 40.0 36.0 41.0 33.0 41.0 24 37.86107879284446 40.0 36.0 41.0 33.0 41.0 25 37.74407756383996 40.0 36.0 41.0 33.0 41.0 26 37.60468660385088 40.0 36.0 41.0 33.0 41.0 27 37.477481906322545 40.0 36.0 41.0 33.0 41.0 28 37.44649460603578 40.0 36.0 41.0 33.0 41.0 29 37.44136556056261 40.0 36.0 41.0 33.0 41.0 30 37.34984569165643 40.0 36.0 41.0 32.0 41.0 31 37.216353953297826 39.0 35.0 41.0 32.0 41.0 32 37.08901816195548 39.0 35.0 41.0 32.0 41.0 33 36.989091902225866 39.0 35.0 41.0 31.0 41.0 34 36.86972552232692 39.0 35.0 41.0 31.0 41.0 35 36.784536392189 39.0 35.0 41.0 31.0 41.0 36 36.63891301379216 39.0 35.0 41.0 30.0 41.0 37 36.53663798989485 39.0 35.0 41.0 30.0 41.0 38 36.43387682643725 39.0 35.0 41.0 30.0 41.0 39 36.38942509900314 39.0 35.0 41.0 30.0 41.0 40 36.19729619008603 39.0 35.0 40.0 30.0 41.0 41 36.109993172197186 39.0 35.0 40.0 29.0 41.0 42 36.02474941963676 39.0 35.0 40.0 29.0 41.0 43 35.968908917110475 38.0 35.0 40.0 29.0 41.0 44 35.77279257135054 38.0 35.0 40.0 28.0 41.0 45 35.671549911238564 38.0 35.0 40.0 28.0 41.0 46 35.57272156220128 38.0 34.0 40.0 28.0 41.0 47 35.41917793254131 38.0 34.0 40.0 27.0 41.0 48 35.351325959306294 38.0 34.0 40.0 27.0 41.0 49 35.176452273658334 38.0 34.0 40.0 27.0 41.0 50 34.98435613819473 37.0 34.0 40.0 26.0 41.0 51 32.93273248668579 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 10.0 10 13.0 11 12.0 12 7.0 13 9.0 14 8.0 15 18.0 16 34.0 17 53.0 18 98.0 19 146.0 20 235.0 21 343.0 22 498.0 23 681.0 24 988.0 25 1325.0 26 1704.0 27 2032.0 28 2368.0 29 2821.0 30 3451.0 31 4403.0 32 5754.0 33 8286.0 34 13290.0 35 16138.0 36 17336.0 37 27838.0 38 35052.0 39 38112.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.15048477399972 18.69343165369384 23.555373480813873 15.600710091492559 2 29.54253721152533 26.095316127270245 26.406663935545545 17.955482725658882 3 33.13396149119213 23.474532295507306 26.924484500887612 16.467021712412947 4 29.384678410487503 26.51645500477946 25.268332650553056 18.83053393417998 5 26.3815376211935 30.28376348491055 24.04642905912877 19.28826983476717 6 27.891301379216166 35.3685647958487 22.969274887341253 13.770858937593882 7 61.70913560016387 28.94223678820156 5.272702444353407 4.075925167281169 8 84.48340843916428 5.409258500614502 6.684145841868087 3.4231872183531338 9 78.0614502253175 8.22832172606855 8.491601802539943 5.218626246074013 10 44.41567663525877 26.269015430834358 15.344530929946743 13.970777003960125 11 34.46674860030042 26.30670490236242 22.141745186399017 17.08480131093814 12 32.14802676498702 23.60234876416769 25.140516181892668 19.109108288952616 13 26.10624061177113 25.682916837361734 27.06868769629933 21.1421548545678 14 21.562201283626926 29.06349856616141 27.080158405025262 22.294141745186398 15 21.076061723337432 26.745869179298104 31.98470572169876 20.19336337566571 16 24.07210159770586 24.394920114707087 30.581455687559746 20.95152260002731 17 24.136556056261096 24.480131093814013 27.543356547862896 23.839956302061996 18 24.936774545951113 25.805271063771677 27.15499112385634 22.102963266420865 19 27.38713641950021 26.85402157585689 24.58009012699713 21.178751877645773 20 29.481906322545402 25.756657107742733 25.06622968728663 19.695206882425236 21 27.550457462788476 26.975283353816742 24.86139560289499 20.612863580499795 22 25.629386863307385 26.05489553461696 25.287450498429603 23.028267103646048 23 25.66106786835996 27.087805544175886 25.70312713368838 21.547999453775777 24 24.740133824935135 24.373617369930358 28.221767035368018 22.66448176976649 25 24.243616004369795 25.879557558377712 26.198552505803637 23.67827393144886 26 23.610542127543358 28.311347808275293 26.02102963266421 22.057080431517136 27 24.69588966270654 27.53953297828759 25.909053666530113 21.85552369247576 28 22.63717055851427 28.345759934453092 27.9371842141199 21.07988529291274 29 23.723064317902498 26.899904410760616 27.53407073603714 21.842960535299742 30 24.556602485320226 26.152123446674857 26.712003277345346 22.579270790659567 31 26.12754335654786 26.34166325276526 25.254677044926943 22.276116345759934 32 26.224225044380717 27.670626792298236 25.253038372251808 20.852109791069235 33 25.30055987983067 27.72907278437799 25.34753516318449 21.622832172606856 34 23.40898538850198 28.170968182438894 26.70544858664482 21.71459784241431 35 24.819336337566572 26.7606172333743 25.99426464563703 22.425781783422096 36 24.879967226546498 29.03236378533388 24.470299057763214 21.61736993035641 37 24.178615321589515 29.86262460740134 25.714051618189266 20.244708452819882 38 24.18571623651509 28.764167690837088 24.590468387272978 22.459647685374843 39 24.822067458691794 26.93650143383859 25.19568482862215 23.045746278847467 40 25.21862624607401 26.232418407756384 26.647548818790114 21.90140652737949 41 22.348764167690838 27.05503209067322 27.252219035914244 23.3439847057217 42 24.539123310118804 26.970913560016385 25.67690837088625 22.81305475897856 43 24.780008193363376 26.745869179298104 25.52341936364878 22.950703263689746 44 23.62856752696982 27.381127953024713 25.873549091902227 23.116755428103236 45 23.6160043697938 26.654103509490646 25.615185033456235 24.114707087259323 46 22.28321726068551 28.3015157722245 25.563839956302065 23.85142701078793 47 23.201420182985117 26.758432336474126 27.417724976102694 22.622422504438074 48 23.838863853611908 25.168373617369934 27.54718011743821 23.445582411579956 49 22.90645910146115 26.706541035094904 26.97856069916701 23.40843916427694 50 21.04328826983477 27.020073740270377 27.867813737539258 24.06882425235559 51 21.68073194046156 26.889526150484773 26.05216441349174 25.377577495561926 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 52.0 1 255.5 2 459.0 3 647.0 4 835.0 5 594.5 6 354.0 7 338.5 8 323.0 9 316.5 10 310.0 11 316.0 12 322.0 13 339.5 14 357.0 15 333.0 16 309.0 17 347.5 18 386.0 19 396.0 20 406.0 21 498.0 22 590.0 23 641.0 24 692.0 25 900.0 26 1412.5 27 1717.0 28 2028.5 29 2340.0 30 2760.5 31 3181.0 32 3659.5 33 4138.0 34 4636.0 35 5134.0 36 5346.5 37 5559.0 38 6327.5 39 7096.0 40 7838.0 41 8580.0 42 9440.0 43 10300.0 44 11232.5 45 12165.0 46 12653.0 47 13141.0 48 13176.5 49 13212.0 50 13386.0 51 13560.0 52 12649.5 53 11739.0 54 11217.0 55 10695.0 56 10458.0 57 10221.0 58 10111.5 59 10002.0 60 9627.0 61 9252.0 62 8407.0 63 7562.0 64 6632.5 65 5703.0 66 4600.5 67 3498.0 68 3007.0 69 2516.0 70 2169.0 71 1822.0 72 1525.5 73 1229.0 74 1052.5 75 726.0 76 576.0 77 452.0 78 328.0 79 260.0 80 192.0 81 153.5 82 115.0 83 93.5 84 72.0 85 45.5 86 19.0 87 16.5 88 14.0 89 11.5 90 9.0 91 8.0 92 7.0 93 4.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 183075.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.89867540625427 #Duplication Level Percentage of deduplicated Percentage of total 1 65.45478346761237 30.042878601665983 2 11.623368122909948 10.669944012016932 3 6.740530055100025 9.281442031954116 4 4.434183436670673 8.14092585006145 5 3.204845946042438 7.354909190222586 6 2.275404919730093 6.266284309709135 7 1.8124695045758012 5.823296463198143 8 1.2412381439741043 4.557694933770313 9 0.9818039010341667 4.055714870954527 >10 2.2063811303240546 12.734671582684692 >50 0.0190410453533899 0.606855114024307 >100 0.005950326672934344 0.46538303973781237 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 357 0.19500204834084392 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05134507715417179 0.0 2 0.0 0.0 0.0 0.21357367199235286 0.0 3 0.0 0.0 0.0 0.28458282124812234 0.0 4 0.0 0.0 0.0 0.39273521780690973 0.0 5 0.0 0.0 0.0 0.730301788884337 0.0 6 0.0 0.0 0.0 0.9750102417042196 0.0 7 0.0 0.0 0.0 1.2033319677727707 0.0 8 0.0 0.0 0.0 1.6796394920114708 0.0 9 0.0 0.0 0.0 1.8877509217533797 0.0 10 0.0 0.0 0.0 2.371705585142701 0.0 11 0.0 0.0 0.0 2.904274204560972 0.0 12 0.0 0.0 0.0 3.3570940871227637 0.0 13 0.0 0.0 0.0 3.513314215485457 0.0 14 0.0 0.0 0.0 3.583777140516182 0.0 15 0.0 0.0 0.0 3.7208794210023215 0.0 16 0.0 0.0 0.0 4.007647139150621 0.0 17 0.0 0.0 0.0 4.313532705175475 0.0 18 0.0 0.0 0.0 4.666939778779189 0.0 19 0.0 0.0 0.0 4.893622832172607 0.0 20 0.0 0.0 0.0 5.095725795439027 0.0 21 0.0 0.0 0.0 5.338249351358733 0.0 22 0.0 0.0 0.0 5.644134917383586 0.0 23 0.0 0.0 0.0 5.938003550457463 0.0 24 0.0 0.0 0.0 6.188174245527789 0.0 25 0.0 0.0 0.0 6.415403523146251 0.0 26 0.0 0.0 0.0 6.6235149528881605 0.0 27 0.0 0.0 0.0 6.833265055305203 0.0 28 0.0 0.0 0.0 7.039737812371978 0.0 29 0.0 0.0 0.0 7.239109654513178 0.0 30 0.0 0.0 0.0 7.513314215485456 0.0 31 0.0 0.0 0.0 7.783695206882426 0.0 32 0.0 0.0 0.0 8.025126314352041 0.0 33 0.0 0.0 0.0 8.257817834220948 0.0 34 0.0 0.0 0.0 8.510173426191452 0.0 35 0.0 0.0 0.0 8.763621466612044 0.0 36 0.0 0.0 0.0 9.0449269425099 0.0 37 0.0 0.0 0.0 9.321862624607402 0.0 38 0.0 0.0 0.0 9.594974737129592 0.0 39 0.0 0.0 0.0 9.875187764577358 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 20 7.0177356E-4 45.000004 9 TCAGACG 20 7.0177356E-4 45.000004 22 GCGATAC 20 7.0177356E-4 45.000004 9 AATAGGC 20 7.0177356E-4 45.000004 4 CATATGC 25 3.877922E-5 45.0 33 TTACGGG 25 3.877922E-5 45.0 3 AGGCGAT 85 0.0 42.35294 7 GGCACCG 50 1.0713848E-9 40.5 8 AAGGGCG 50 1.0713848E-9 40.5 5 AAACACG 45 1.9130312E-8 40.0 40 TCAAGCG 45 1.9130312E-8 40.0 17 TGGGCGA 40 3.4370169E-7 39.375004 6 GGTAATT 35 6.2195522E-6 38.57143 8 CGAAAAA 35 6.2195522E-6 38.57143 22 TTGCGAG 35 6.2195522E-6 38.57143 2 AATTATC 105 0.0 38.57143 45 TAAGGCG 35 6.2195522E-6 38.57143 5 ACATACG 35 6.2195522E-6 38.57143 17 GGCGATT 65 9.094947E-12 38.07692 8 TGCGGGA 95 0.0 37.894737 4 >>END_MODULE