##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936501.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 227546 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09072451284575 33.0 31.0 34.0 30.0 34.0 2 32.212787744016595 33.0 31.0 34.0 30.0 34.0 3 32.0777952589806 33.0 31.0 34.0 30.0 34.0 4 35.8228929535127 37.0 35.0 37.0 35.0 37.0 5 35.896161655225754 37.0 35.0 37.0 35.0 37.0 6 35.86596995772283 37.0 35.0 37.0 35.0 37.0 7 26.72153762316191 36.0 10.0 37.0 0.0 37.0 8 31.100977384792525 36.0 19.0 37.0 17.0 37.0 9 35.99755214330289 39.0 32.0 39.0 32.0 39.0 10 36.747365367881656 38.0 35.0 39.0 33.0 39.0 11 37.094372126954546 39.0 37.0 39.0 34.0 39.0 12 37.14673516563684 39.0 37.0 39.0 34.0 39.0 13 37.13457498703559 39.0 37.0 39.0 34.0 39.0 14 38.37646453903826 40.0 38.0 41.0 34.0 41.0 15 38.44061860019512 40.0 38.0 41.0 34.0 41.0 16 38.38082849182143 40.0 38.0 41.0 34.0 41.0 17 38.28902287889042 40.0 37.0 41.0 34.0 41.0 18 38.16640591352957 40.0 37.0 41.0 34.0 41.0 19 38.03750889929948 40.0 37.0 41.0 34.0 41.0 20 38.09285155528992 40.0 37.0 41.0 34.0 41.0 21 38.05503063116908 40.0 37.0 41.0 34.0 41.0 22 38.073097307797106 40.0 37.0 41.0 34.0 41.0 23 38.01364998725533 40.0 37.0 41.0 34.0 41.0 24 37.9511483392369 40.0 36.0 41.0 33.0 41.0 25 37.841957230625894 40.0 36.0 41.0 33.0 41.0 26 37.73458992906929 40.0 36.0 41.0 33.0 41.0 27 37.61109841526549 40.0 36.0 41.0 33.0 41.0 28 37.575444086030956 40.0 36.0 41.0 33.0 41.0 29 37.532925210726624 40.0 36.0 41.0 33.0 41.0 30 37.41098503159801 40.0 36.0 41.0 33.0 41.0 31 37.28811756743691 40.0 36.0 41.0 32.0 41.0 32 37.118978140683645 39.0 35.0 41.0 32.0 41.0 33 37.01530679510956 39.0 35.0 41.0 31.0 41.0 34 36.88012094257864 39.0 35.0 41.0 31.0 41.0 35 36.65628927777241 39.0 35.0 41.0 30.0 41.0 36 36.524351120213055 39.0 35.0 41.0 30.0 41.0 37 36.4058739771299 39.0 35.0 41.0 30.0 41.0 38 36.29012155783885 39.0 35.0 41.0 30.0 41.0 39 36.21523999542949 39.0 35.0 41.0 29.0 41.0 40 36.00442987352008 39.0 35.0 41.0 28.0 41.0 41 35.93368373867262 39.0 35.0 40.0 28.0 41.0 42 35.82507273254639 39.0 35.0 40.0 28.0 41.0 43 35.745084510384714 39.0 35.0 40.0 27.0 41.0 44 35.56453640143092 38.0 35.0 40.0 27.0 41.0 45 35.435626203053445 38.0 35.0 40.0 26.0 41.0 46 35.268750054933946 38.0 34.0 40.0 26.0 41.0 47 35.11929456022079 38.0 34.0 40.0 24.0 41.0 48 35.05324637655683 38.0 34.0 40.0 24.0 41.0 49 34.9001960043244 38.0 34.0 40.0 24.0 41.0 50 34.74048763766447 38.0 34.0 40.0 24.0 41.0 51 32.67169715134522 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 21.0 10 17.0 11 16.0 12 8.0 13 9.0 14 17.0 15 22.0 16 27.0 17 50.0 18 93.0 19 158.0 20 283.0 21 431.0 22 658.0 23 1005.0 24 1449.0 25 2092.0 26 2517.0 27 2931.0 28 3288.0 29 3662.0 30 4455.0 31 5323.0 32 6960.0 33 9521.0 34 15338.0 35 18696.0 36 20972.0 37 33993.0 38 44116.0 39 49403.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.545243599096445 17.3687957599782 23.205857277209883 16.880103363715467 2 29.257380925175568 26.421910295061217 27.08683079465251 17.233877985110702 3 31.943870689882488 25.24720276339729 27.12154904942297 15.68737749729725 4 27.35007427069691 26.201735033795366 28.147715187258843 18.30047550824888 5 25.946841517759044 30.233007831383546 25.133379624339693 18.686771026517714 6 27.148796287344094 34.83998839795031 24.81520220087367 13.196013113831928 7 61.153788684485775 28.266811985268912 7.003858560466894 3.575540769778419 8 83.16516220895994 5.989118683694725 7.387077777680117 3.4586413296652103 9 77.16857250841588 7.469698434602234 9.302734392166858 6.058994664815026 10 41.084000597681346 27.85678500171394 16.79396693415837 14.265247466446345 11 31.710511281235444 25.831699963963327 24.768618213460137 17.689170541341092 12 27.280637761155983 24.710607964982906 28.390303499072715 19.618450774788396 13 24.016682341152997 26.156908932699324 30.35386251571111 19.47254621043657 14 22.124317720373025 28.265493570530793 28.894816872192873 20.71537183690331 15 21.18648536999112 26.32610549075791 33.257451240628264 19.229957898622697 16 24.72774735657845 25.4779253425681 29.87791479525019 19.91641250560326 17 25.144805885403393 25.43046241199582 28.03652887767748 21.388202824923315 18 25.387394197217265 24.77037609977763 29.076318634473907 20.7659110685312 19 25.737653045977517 26.23249804435147 27.23537218848057 20.794476721190442 20 26.3832367960764 26.55463071203185 27.786909020593637 19.275223471298112 21 25.859386673463824 27.071009817795083 27.565415344589667 19.504188164151422 22 25.40848883302717 24.642050398600723 27.78603007743489 22.163430690937215 23 23.408014203721443 27.17604352526522 28.073005018765436 21.3429372522479 24 23.150044386629517 25.234458087595474 29.634887011856943 21.980610513918066 25 22.442495143839047 27.80448788376856 28.428098054898786 21.324918917493605 26 22.714088579891538 27.484113102405665 27.68231478470287 22.11948353299992 27 22.45172404700588 27.743401334235717 28.54587643817074 21.258998180587664 28 21.98720258760866 27.067933516739473 29.906480447909434 21.038383447742433 29 23.475692826944883 25.725347841755074 29.033689891274733 21.765269440025314 30 23.305177854148173 26.124827507405097 29.313633287335307 21.256361351111426 31 24.573053360639168 26.617035676302812 27.53201550455732 21.277895458500698 32 24.538335105868704 26.925544725022633 27.658583319416735 20.87753684969193 33 23.93581957054837 26.97564448507115 27.16417779262215 21.924358151758323 34 24.191592029743436 26.662301248978228 28.34591686955605 20.80018985172229 35 22.652562558779323 26.849076670211737 28.721665069919926 21.77669570108901 36 24.73477890184842 27.7956984521811 26.816995244917514 20.652527401052975 37 22.851203712655902 27.572886361439007 28.28131454738822 21.29459537851687 38 22.882845666370756 28.070807660868574 27.25426946639361 21.792077206367065 39 23.65675511764654 26.9927838766667 27.249435279020506 22.101025726666258 40 24.096666168598876 26.88027915234722 28.02905786082814 20.993996818225767 41 22.09619153929315 27.481476272929427 27.680117426806007 22.742214760971407 42 23.042813321262514 26.18942982957292 28.40436658961265 22.363390259551917 43 23.33418297838679 26.3832367960764 27.319750731720177 22.962829493816635 44 23.012050310706407 26.83193727861619 27.543002294041646 22.613010116635756 45 22.243414518383094 26.912360577641444 27.54651806667663 23.297706837298833 46 23.313088342576886 27.627820308860624 27.380837281253022 21.678254067309467 47 21.805700825327627 27.042444165135844 29.276717674667978 21.875137334868555 48 22.453042461743998 26.58627266574671 28.53664753500391 22.424037337505386 49 22.653441501938072 25.776326544962338 29.063573958672094 22.5066579944275 50 21.719564395770526 26.816555773338134 29.10620270187127 22.357677129020068 51 21.830750705351885 26.83940829546553 27.48279468766755 23.847046311515037 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 81.0 1 284.5 2 488.0 3 1142.5 4 1797.0 5 1230.5 6 664.0 7 609.0 8 554.0 9 555.5 10 557.0 11 517.5 12 478.0 13 497.0 14 516.0 15 515.5 16 515.0 17 498.0 18 481.0 19 579.0 20 677.0 21 764.0 22 851.0 23 988.0 24 1125.0 25 1344.0 26 1921.5 27 2280.0 28 2702.0 29 3124.0 30 3663.5 31 4203.0 32 4880.5 33 5558.0 34 6467.5 35 7377.0 36 7885.0 37 8393.0 38 9336.5 39 10280.0 40 11307.0 41 12334.0 42 13070.0 43 13806.0 44 14663.5 45 15521.0 46 17167.5 47 18814.0 48 18159.0 49 17504.0 50 17296.0 51 17088.0 52 16073.0 53 15058.0 54 14158.0 55 13258.0 56 12276.0 57 11294.0 58 10721.0 59 10148.0 60 9367.0 61 8586.0 62 7666.0 63 6746.0 64 5838.5 65 4931.0 66 4209.5 67 3488.0 68 3072.0 69 2656.0 70 2167.5 71 1679.0 72 1426.0 73 1173.0 74 985.5 75 655.5 76 513.0 77 381.0 78 249.0 79 187.5 80 126.0 81 107.5 82 89.0 83 76.0 84 63.0 85 47.0 86 31.0 87 21.5 88 12.0 89 11.5 90 11.0 91 6.5 92 2.0 93 3.0 94 4.0 95 2.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 227546.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.68570882996745 #Duplication Level Percentage of deduplicated Percentage of total 1 64.44493005276362 28.79767379905414 2 11.972849946580439 10.700305731555696 3 6.879435735132576 9.222373865238222 4 4.618045504589966 8.254425471265892 5 3.2066056586077605 7.164472339653619 6 2.3189900298192603 6.21754279512606 7 1.7812241659054342 5.571668510698631 8 1.275444461399547 4.559531186471586 9 0.9675785567855729 3.891324029277622 >10 2.511905902046157 13.906391451613425 >50 0.013993904746772924 0.42522273597784416 >100 0.007996516998155956 0.9214648154645929 >500 9.995646247694945E-4 0.36760326860269504 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 823 0.3616851098239477 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCG 490 0.21534107389275134 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTC 439 0.1929280233447303 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGC 436 0.19160960860661141 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03735508424670177 0.0 2 0.0 0.0 0.0 0.22017526126585393 0.0 3 0.0 0.0 0.0 0.29049071396552784 0.0 4 0.0 0.0 0.0 0.45441361307164263 0.0 5 0.0 0.0 0.0 1.0375923988995632 0.0 6 0.0 0.0 0.0 1.305230590737697 0.0 7 0.0 0.0 0.0 1.5438636583372154 0.0 8 0.0 0.0 0.0 2.0123403619487927 0.0 9 0.0 0.0 0.0 2.207026271611015 0.0 10 0.0 0.0 0.0 3.0103803187047893 0.0 11 0.0 0.0 0.0 3.4015100243467256 0.0 12 0.0 0.0 0.0 4.13059337452647 0.0 13 0.0 0.0 0.0 4.286605785203871 0.0 14 0.0 0.0 0.0 4.373621157919717 0.0 15 0.0 0.0 0.0 4.527875682279627 0.0 16 0.0 0.0 0.0 4.723001063521222 0.0 17 0.0 0.0 0.0 4.97789457955754 0.0 18 0.0 0.0 0.0 5.230151266117621 0.0 19 0.0 0.0 0.0 5.407697784184297 0.0 20 0.0 0.0 0.0 5.572499626449158 0.0 21 0.0 0.0 0.0 5.789159115080028 0.0 22 0.0 0.0 0.0 6.041415801640108 0.0 23 0.0 0.0 0.0 6.289277772406458 0.0 24 0.0 0.0 0.0 6.482645267330562 0.0 25 0.0 0.0 0.0 6.672057518040308 0.0 26 0.0 0.0 0.0 6.839056718202034 0.0 27 0.0 0.0 0.0 7.017042707848083 0.0 28 0.0 0.0 0.0 7.196347112232252 0.0 29 0.0 0.0 0.0 7.38004623241015 0.0 30 0.0 0.0 0.0 7.617800356850922 0.0 31 0.0 0.0 0.0 7.830504601267436 0.0 32 0.0 0.0 0.0 8.064742953073225 0.0 33 0.0 0.0 0.0 8.274810368013501 0.0 34 0.0 0.0 0.0 8.473451521890079 0.0 35 0.0 0.0 0.0 8.714721418965835 0.0 36 0.0 0.0 0.0 8.937533509707928 0.0 37 0.0 0.0 0.0 9.158587714132526 0.0 38 0.0 0.0 0.0 9.406010213319504 0.0 39 0.0 0.0 0.0 9.695621984126287 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGAA 40 6.7739165E-9 45.000004 11 TACGAAT 45 3.8198777E-10 45.000004 12 CGCTACG 20 7.0213474E-4 45.000004 22 GCGATTC 20 7.0213474E-4 45.000004 9 CGTTTTA 85 0.0 42.35294 1 ATAACGT 50 1.0732037E-9 40.500004 31 GGCGATT 95 0.0 40.263157 8 CGAATAT 45 1.9166691E-8 40.000004 14 AAGGGCG 75 0.0 39.0 5 CGTTTTT 375 0.0 39.0 1 GACACGA 35 6.2262206E-6 38.57143 25 CGGGATC 70 0.0 38.57143 6 TACAGTG 35 6.2262206E-6 38.57143 29 TGACGGG 65 9.094947E-12 38.07692 3 CAACGGA 30 1.13704584E-4 37.500004 37 CGACGCG 30 1.13704584E-4 37.500004 15 TTCGGGC 30 1.13704584E-4 37.500004 4 CGCAATC 30 1.13704584E-4 37.500004 20 GTAAGCG 30 1.13704584E-4 37.500004 1 TAAGCGG 30 1.13704584E-4 37.500004 2 >>END_MODULE