##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936500.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 85225 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97309474919331 33.0 31.0 34.0 30.0 34.0 2 32.07877970079202 33.0 31.0 34.0 30.0 34.0 3 31.984992666471104 33.0 31.0 34.0 30.0 34.0 4 35.7239542387797 37.0 35.0 37.0 35.0 37.0 5 35.790812555001466 37.0 35.0 37.0 35.0 37.0 6 35.738738633030216 37.0 35.0 37.0 35.0 37.0 7 26.599108242886476 35.0 10.0 37.0 0.0 37.0 8 30.97744793194485 35.0 19.0 37.0 17.0 37.0 9 35.837371663244355 39.0 32.0 39.0 32.0 39.0 10 36.603754766793784 37.0 35.0 39.0 32.0 39.0 11 36.93729539454385 39.0 37.0 39.0 33.0 39.0 12 36.863960105602814 39.0 35.0 39.0 33.0 39.0 13 36.69107656204165 39.0 35.0 39.0 33.0 39.0 14 37.82404224112643 40.0 36.0 41.0 33.0 41.0 15 37.9072924611323 40.0 36.0 41.0 33.0 41.0 16 37.922968612496334 40.0 36.0 41.0 33.0 41.0 17 37.8566617776474 40.0 36.0 41.0 33.0 41.0 18 37.73574655324142 40.0 36.0 41.0 33.0 41.0 19 37.575230272807275 39.0 36.0 41.0 33.0 41.0 20 37.647497799941334 39.0 36.0 41.0 33.0 41.0 21 37.55645643883837 39.0 35.0 41.0 33.0 41.0 22 37.62977999413318 39.0 35.0 41.0 33.0 41.0 23 37.57010266940452 39.0 35.0 41.0 33.0 41.0 24 37.55488413024347 39.0 35.0 41.0 33.0 41.0 25 37.4747785274274 39.0 35.0 41.0 33.0 41.0 26 37.3273335288941 39.0 35.0 41.0 33.0 41.0 27 37.191152830742155 39.0 35.0 41.0 32.0 41.0 28 37.15049574655324 39.0 35.0 41.0 32.0 41.0 29 37.14715165737753 39.0 35.0 41.0 32.0 41.0 30 37.04519800528014 39.0 35.0 41.0 32.0 41.0 31 36.9163156350836 39.0 35.0 41.0 31.0 41.0 32 36.7717453798768 39.0 35.0 41.0 31.0 41.0 33 36.65404517453799 39.0 35.0 41.0 31.0 41.0 34 36.49045467879144 39.0 35.0 41.0 30.0 41.0 35 36.40215899090642 39.0 35.0 40.0 30.0 41.0 36 36.24010560281607 39.0 35.0 40.0 30.0 41.0 37 36.05784687591669 38.0 35.0 40.0 30.0 41.0 38 35.89870343209152 38.0 35.0 40.0 29.0 41.0 39 35.878826635376946 38.0 35.0 40.0 29.0 41.0 40 35.6041067761807 38.0 35.0 40.0 27.0 41.0 41 35.52249926664711 38.0 35.0 40.0 27.0 41.0 42 35.47568201818715 38.0 34.0 40.0 27.0 41.0 43 35.44871809914931 38.0 34.0 40.0 27.0 41.0 44 35.23076562041654 38.0 34.0 40.0 26.0 41.0 45 35.155142270460544 38.0 34.0 40.0 26.0 41.0 46 35.0530126136697 38.0 34.0 40.0 26.0 41.0 47 34.82983866236433 37.0 34.0 40.0 25.0 41.0 48 34.75304194778528 37.0 34.0 40.0 24.0 41.0 49 34.57568788501027 37.0 34.0 40.0 24.0 41.0 50 34.33650924024641 37.0 33.0 40.0 23.0 41.0 51 32.20672337929012 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 8.0 10 7.0 11 4.0 12 2.0 13 1.0 14 2.0 15 8.0 16 13.0 17 21.0 18 52.0 19 71.0 20 115.0 21 220.0 22 297.0 23 409.0 24 535.0 25 768.0 26 956.0 27 1131.0 28 1306.0 29 1559.0 30 1812.0 31 2437.0 32 3097.0 33 4279.0 34 6747.0 35 8500.0 36 8004.0 37 12343.0 38 14998.0 39 15515.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.46230566148431 18.514520387210325 22.158990906424172 14.864183044881196 2 29.287180991493106 27.77354062775007 25.738926371369903 17.20035200938692 3 32.56086828982106 27.049574655324143 25.217952478732762 15.17160457612203 4 26.96743913171018 25.602816075095337 27.936638310354944 19.493106482839544 5 27.238486359636255 29.2414197711939 24.5057201525374 19.014373716632445 6 25.95482546201232 35.933118216485774 24.299207978879437 13.81284834262247 7 60.572601936051626 28.621883250220005 7.212672337929011 3.5928424757993542 8 81.51246699911998 6.826635376943385 7.501320035200938 4.1595775887357 9 76.11968319155179 7.01906717512467 9.302434731592843 7.558814901730712 10 44.34496919917865 23.534174244646525 17.538281020827224 14.582575535347608 11 36.95394543854503 24.828395423877968 22.127310061601644 16.09034907597536 12 30.696391903784097 24.188911704312115 26.022880610149603 19.09181578175418 13 24.57494866529774 29.186271633910238 29.183924904664128 17.0548547961279 14 21.537107656204167 31.98005280140804 27.686711645643886 18.796127896743915 15 19.789967732472867 25.518333822235263 36.503373423291286 18.188325022000587 16 23.108242886476972 25.71545907890877 30.959225579348782 20.217072455265473 17 24.590202405397477 24.200645350542683 26.867703138750365 24.341449105309476 18 26.708125550014667 23.862716339102377 28.56556174831329 20.86359636256967 19 26.746846582575536 26.562628336755644 25.371663244353183 21.318861836315637 20 29.349369316515105 25.791727779407452 26.212965679084775 18.645937224992668 21 24.90583748899971 28.605456145497214 27.359342915811087 19.12936344969199 22 25.30712819008507 24.801408037547667 26.587268993839835 23.304194778527425 23 22.14491053094749 29.52068055148137 27.36520973892637 20.969199178644764 24 23.90730419477853 24.31446171897917 29.79642123789968 21.98181284834262 25 21.520680551481373 29.093575828688767 27.727779407450864 21.657964212378996 26 21.943091815781752 28.220592549134643 27.862716339102377 21.973599295981224 27 23.138750366676444 28.157230859489584 28.197125256673512 20.506893517160456 28 20.538574361982988 26.61308301554708 31.155177471399238 21.693165151070694 29 23.1129363449692 26.313875036667646 29.61806981519507 20.955118803168084 30 23.353476092695804 25.39982399530654 30.327955412144327 20.91874449985333 31 26.3232619536521 25.513640363743033 26.225872689938402 21.937224992666472 32 27.748899970665885 26.72572601936052 25.607509533587564 19.917864476386036 33 24.941038427691407 26.405397477266064 26.60956292167791 22.04400117336462 34 22.66236432971546 27.734819595189204 28.120856556174832 21.481959518920505 35 22.704605456145497 28.57494866529774 27.758286887650335 20.962158990906424 36 27.481372836608976 26.90525080668818 26.399530654150777 19.213845702552067 37 23.190378410090936 28.133763567028453 27.663244353182755 21.012613669697856 38 22.80786154297448 29.11938985039601 25.691991786447637 22.380756820181873 39 24.186564975066002 27.660897623936638 26.08741566441772 22.065121736579645 40 24.960985626283367 26.610736286300966 26.94749193311822 21.480786154297448 41 21.189791727779408 27.83338222352596 26.5450278674098 24.431798181284833 42 24.70401877383397 26.055734819595187 26.97799941331769 22.262246993253154 43 25.86564975066002 24.708712232326196 26.69052508066882 22.73511293634497 44 22.886476972719272 26.553241419771194 27.537694338515696 23.022587268993842 45 21.93253153417424 28.0704018773834 26.08976239366383 23.90730419477853 46 24.667644470519214 27.40158404224113 25.68143150484013 22.24933998239953 47 21.74009973599296 27.27603402757407 29.160457612202993 21.823408624229977 48 23.856849515987093 25.837488999706657 27.67497799941332 22.63068348489293 49 24.156057494866527 24.254620123203285 29.42329128776767 22.166031094162513 50 21.943091815781752 27.943678498093284 28.484599589322386 21.62863009680258 51 22.23173951305368 27.06130830155471 25.446758580228806 25.260193605162804 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 26.0 1 99.0 2 172.0 3 248.5 4 325.0 5 249.0 6 173.0 7 161.0 8 149.0 9 146.5 10 144.0 11 145.5 12 147.0 13 166.0 14 185.0 15 174.0 16 163.0 17 180.0 18 197.0 19 215.0 20 233.0 21 257.5 22 282.0 23 315.0 24 348.0 25 415.0 26 557.0 27 632.0 28 740.5 29 849.0 30 1042.0 31 1235.0 32 1470.5 33 1706.0 34 1936.0 35 2166.0 36 2481.5 37 2797.0 38 3172.5 39 3548.0 40 4015.5 41 4483.0 42 5020.0 43 5557.0 44 6201.0 45 6845.0 46 8059.0 47 9273.0 48 8294.5 49 7316.0 50 7114.0 51 6912.0 52 6306.5 53 5701.0 54 5279.5 55 4858.0 56 4541.5 57 4225.0 58 3870.5 59 3516.0 60 3194.5 61 2873.0 62 2598.0 63 2323.0 64 2036.0 65 1749.0 66 1477.0 67 1205.0 68 1018.5 69 832.0 70 721.0 71 610.0 72 485.0 73 360.0 74 303.0 75 212.0 76 178.0 77 134.0 78 90.0 79 71.5 80 53.0 81 40.5 82 28.0 83 23.5 84 19.0 85 13.0 86 7.0 87 3.5 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 1.0 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 85225.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.77676738046348 #Duplication Level Percentage of deduplicated Percentage of total 1 68.82367091652634 33.56996186564975 2 11.176329083473659 10.902904077442065 3 6.194370940582151 9.064241713112349 4 4.005292278085157 7.814608389557056 5 2.7399566995429394 6.682311528307422 6 1.9148424344479191 5.603989439718393 7 1.4120760163579504 4.82135523613963 8 1.1210007216742843 4.3743033147550605 9 0.8371421698340148 3.6749779994133176 >10 1.7416406062063987 10.671751246699912 >50 0.016839066634592254 0.7274860662951012 >100 0.016839066634592254 2.092109122909944 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC 481 0.5643883836902317 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCG 443 0.5198005280140804 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGC 397 0.46582575535347615 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 121 0.14197711938985041 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTT 119 0.13963039014373715 No Hit GCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 117 0.13728366089762392 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTC 105 0.12320328542094457 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCG 98 0.11498973305954827 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGC 97 0.11381636843649165 No Hit GAATCTATCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC 92 0.10794954532120857 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCT 91 0.10677618069815195 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTT 88 0.1032560868289821 No Hit GAACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCT 86 0.10090935758286887 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06922851276034027 0.0 2 0.0 0.0 0.0 0.42945145203872104 0.0 3 0.0 0.0 0.0 0.5585215605749486 0.0 4 0.0 0.0 0.0 0.8542094455852156 0.0 5 0.0 0.0 0.0 2.013493693165151 0.0 6 0.0 0.0 0.0 2.459372249926665 0.0 7 0.0 0.0 0.0 2.8407157524200644 0.0 8 0.0 0.0 0.0 3.5447345262540333 0.0 9 0.0 0.0 0.0 3.7970079202112057 0.0 10 0.0 0.0 0.0 4.966852449398651 0.0 11 0.0 0.0 0.0 5.589909064241713 0.0 12 0.0 0.0 0.0 6.758580228806101 0.0 13 0.0 0.0 0.0 7.092989146377237 0.0 14 0.0 0.0 0.0 7.2373129950132 0.0 15 0.0 0.0 0.0 7.525960692285127 0.0 16 0.0 0.0 0.0 7.872103256086829 0.0 17 0.0 0.0 0.0 8.253446758580228 0.0 18 0.0 0.0 0.0 8.822528600762688 0.0 19 0.0 0.0 0.0 9.088882370196538 0.0 20 0.0 0.0 0.0 9.36931651510707 0.0 21 0.0 0.0 0.0 9.714285714285714 0.0 22 0.0 0.0 0.0 10.04517453798768 0.0 23 0.0 0.0 0.0 10.356116163097683 0.0 24 0.0 0.0 0.0 10.594309181578176 0.0 25 0.0 0.0 0.0 10.824288647697271 0.0 26 0.0 0.0 0.0 11.042534467585803 0.0 27 0.0 0.0 0.0 11.299501320035201 0.0 28 0.0 0.0 0.0 11.501320035200939 0.0 29 0.0 0.0 0.0 11.7782340862423 0.0 30 0.0 0.0 0.0 12.117336462305662 0.0 31 0.0 0.0 0.0 12.423584628923438 0.0 32 0.0 0.0 0.0 12.719272513933705 0.0 33 0.0 0.0 0.0 12.978586095629217 0.0 34 0.0 0.0 0.0 13.291874449985333 0.0 35 0.0 0.0 0.0 13.608682898210619 0.0 36 0.0 0.0 0.0 13.846875916691111 0.0 37 0.0 0.0 0.0 14.101496039894398 0.0 38 0.0 0.0 0.0 14.424171311234966 0.0 39 0.0 0.0 0.0 14.814901730712819 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTATC 20 6.9965323E-4 45.000004 3 GGGCTAT 20 6.9965323E-4 45.000004 7 CTAAGGG 25 3.8603725E-5 45.000004 3 AGATTAT 20 6.9965323E-4 45.000004 16 TCGAGGG 20 6.9965323E-4 45.000004 3 GGCGATC 20 6.9965323E-4 45.000004 8 GGGGCGA 25 3.8603725E-5 45.000004 6 TGAAACG 35 1.194312E-7 45.0 4 GGCGATA 35 1.194312E-7 45.0 8 GTCTTAC 100 0.0 42.750004 31 TTACACG 100 0.0 42.750004 34 ATGTCTT 105 0.0 40.714287 29 TACACGC 105 0.0 40.714287 35 ACACGCG 110 0.0 38.863632 36 CATGGGA 35 6.180464E-6 38.571426 4 GGACTGC 35 6.180464E-6 38.571426 8 GTGCTTG 35 6.180464E-6 38.571426 1 GGGCGAT 140 0.0 38.571426 7 CGAGGGC 35 6.180464E-6 38.571426 4 GGCGACT 35 6.180464E-6 38.571426 10 >>END_MODULE