##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936497.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 116132 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.073382013570765 33.0 31.0 34.0 30.0 34.0 2 32.20094375365963 33.0 31.0 34.0 30.0 34.0 3 32.10783418868184 33.0 31.0 34.0 30.0 34.0 4 35.83208762442737 37.0 35.0 37.0 35.0 37.0 5 35.89081390142252 37.0 35.0 37.0 35.0 37.0 6 35.85315847483898 37.0 35.0 37.0 35.0 37.0 7 26.781050873144352 36.0 10.0 37.0 0.0 37.0 8 31.185857472531257 36.0 19.0 37.0 17.0 37.0 9 36.022439982089345 39.0 32.0 39.0 32.0 39.0 10 36.70904660214239 38.0 35.0 39.0 33.0 39.0 11 37.1054317500775 39.0 37.0 39.0 34.0 39.0 12 37.086229463024836 39.0 37.0 39.0 34.0 39.0 13 37.01085833362036 39.0 37.0 39.0 33.0 39.0 14 38.17217476664485 40.0 37.0 41.0 33.0 41.0 15 38.321392897737056 40.0 37.0 41.0 34.0 41.0 16 38.260401956394446 40.0 37.0 41.0 34.0 41.0 17 38.19989322495092 40.0 37.0 41.0 34.0 41.0 18 38.127888953948954 40.0 37.0 41.0 34.0 41.0 19 38.01047945441394 40.0 37.0 41.0 34.0 41.0 20 38.05921709778528 40.0 37.0 41.0 34.0 41.0 21 38.007164261357765 40.0 36.0 41.0 34.0 41.0 22 37.98965831984294 40.0 36.0 41.0 33.0 41.0 23 37.926187441876486 40.0 36.0 41.0 34.0 41.0 24 37.875047359900805 40.0 36.0 41.0 33.0 41.0 25 37.779888402851924 40.0 36.0 41.0 33.0 41.0 26 37.63659456480556 40.0 36.0 41.0 33.0 41.0 27 37.518160369235005 40.0 36.0 41.0 33.0 41.0 28 37.49975889505046 40.0 36.0 41.0 33.0 41.0 29 37.50829228808597 40.0 36.0 41.0 33.0 41.0 30 37.448601591292665 40.0 36.0 41.0 33.0 41.0 31 37.29844487307547 40.0 35.0 41.0 32.0 41.0 32 37.178279888402855 39.0 35.0 41.0 32.0 41.0 33 37.114387076774705 39.0 35.0 41.0 32.0 41.0 34 37.00176523266628 39.0 35.0 41.0 31.0 41.0 35 36.90452243998209 39.0 35.0 41.0 31.0 41.0 36 36.7621327454965 39.0 35.0 41.0 31.0 41.0 37 36.70608445561947 39.0 35.0 41.0 31.0 41.0 38 36.604131505528194 39.0 35.0 41.0 30.0 41.0 39 36.569507112596014 39.0 35.0 41.0 30.0 41.0 40 36.43767437054387 39.0 35.0 41.0 30.0 41.0 41 36.33150208383564 39.0 35.0 40.0 30.0 41.0 42 36.27091585437261 39.0 35.0 40.0 30.0 41.0 43 36.21494506251507 39.0 35.0 40.0 30.0 41.0 44 36.003409912857784 39.0 35.0 40.0 29.0 41.0 45 35.9163279716185 38.0 35.0 40.0 29.0 41.0 46 35.84319567388833 38.0 35.0 40.0 29.0 41.0 47 35.72012020803913 38.0 35.0 40.0 28.0 41.0 48 35.66538077360245 38.0 35.0 40.0 28.0 41.0 49 35.53197223848724 38.0 34.0 40.0 28.0 41.0 50 35.31401336410292 38.0 34.0 40.0 27.0 41.0 51 33.207281369476114 36.0 31.0 39.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 13.0 10 5.0 11 5.0 12 2.0 13 2.0 14 4.0 15 2.0 16 17.0 17 30.0 18 48.0 19 67.0 20 118.0 21 172.0 22 255.0 23 447.0 24 541.0 25 821.0 26 1087.0 27 1268.0 28 1429.0 29 1700.0 30 2201.0 31 2604.0 32 3544.0 33 4951.0 34 8334.0 35 10685.0 36 10698.0 37 17015.0 38 22629.0 39 25431.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.46946578031895 19.211759032824716 24.252574656425445 16.066200530430887 2 28.403024144938517 24.711535149657287 28.525298797919607 18.360141907484586 3 32.39675541625047 24.56428891261668 26.724761478317777 16.314194192815073 4 28.18689077945786 26.357076430269004 26.897840388523402 18.558192401749732 5 25.77153583852857 30.900182550890364 24.78042227809734 18.547859332483725 6 25.820617917542105 36.64709124100162 23.902111390486688 13.630179450969587 7 61.778837874143214 28.47191127337857 5.786518788964282 3.9627320635139323 8 84.61319877380912 4.9650397823166745 6.908517893431612 3.5132435504425996 9 78.1033651362243 8.103709571866496 8.768470361312989 5.024454930596218 10 42.953707849688286 27.212137912031135 16.055867461164883 13.778286777115694 11 33.48431095649778 26.251162470292428 23.13660317569662 17.127923397513175 12 30.633244928185167 24.372266042090036 27.271553060310683 17.722935969414113 13 24.506595942548135 28.03275582957324 28.393552164778015 19.06709606310061 14 19.666414080529055 31.360004133227708 28.06978266110977 20.903799125133467 15 19.51055695243344 26.305411083938967 34.024213825646676 20.159818137980917 16 21.981882685220267 25.428822374539315 32.60169462335962 19.98760031688079 17 22.412427237970586 24.614232080735714 28.23166741294389 24.74167326834981 18 23.9184720834912 25.21096683084766 29.41910928942927 21.451451796231876 19 25.77584128405607 27.12258464505907 26.329521578892983 20.77205249199187 20 27.092446526366547 26.722178211001275 25.89381049150966 20.291564771122516 21 25.354768711466264 27.611683256983433 26.54565494437364 20.487893087176662 22 24.00199772672476 26.28043949987945 25.854200392656633 23.863362380739158 23 22.610477732235733 28.093893156063785 26.43199118244756 22.86363792925292 24 22.174766644852408 26.25977336134743 30.182034236902833 21.383425756897324 25 21.466090311025386 26.7557606861158 29.128061171770053 22.65008783108876 26 21.873385457927185 29.261529983122653 27.805428305721076 21.059656253229083 27 22.074880308614336 28.346192263975478 27.991423552509215 21.587503874900975 28 19.67674714979506 28.682017015120724 30.723659284262734 20.91757655082148 29 20.975269520890024 27.00203217028898 30.60913443323115 21.413563875589848 30 22.571728722488203 27.470464643681332 28.01467295835773 21.943133675472737 31 24.380876933145043 26.977921675334965 26.029862570178764 22.61133882134123 32 24.196603864567905 28.124031274756312 26.281300588984948 21.398064271690835 33 24.14924396376537 28.596769193676163 25.92997623394069 21.32401060861778 34 20.619639720318258 28.636379292529192 27.537629593910378 23.206351393242173 35 21.82688664623015 26.915923259738918 28.151586126132333 23.105603967898595 36 22.90841456273895 28.723349292184757 26.739399993111284 21.628836151965007 37 22.247098129714463 29.01956394447697 27.087279991733542 21.64605793407502 38 20.693693383391313 28.83356869768884 26.78331553749182 23.68942238142803 39 21.90696793304171 28.08097681948128 26.559432370061653 23.452622877415354 40 22.992801295078014 27.091585437261045 27.46185375262632 22.453759515034616 41 19.687080219061066 27.51438018806186 27.61082216787793 25.18771742499914 42 21.924189715151723 26.40529742017704 27.470464643681332 24.20004822098991 43 23.21668446250818 26.130609995522335 27.584128405607412 23.06857713636207 44 21.78038783453312 28.407329590466023 26.847036131298868 22.965246443701997 45 21.072572589811596 27.764957117762545 27.02097613061 24.141494161815867 46 21.154376054834152 29.177143250783594 26.24169049013192 23.426790204250338 47 21.28612268797575 27.185444149760617 28.332414838287466 23.196018323976165 48 22.220404367443944 25.743119898047052 28.390968897461512 23.6455068370475 49 21.11907140150863 25.784452175111078 28.961870974408434 24.13460544897186 50 20.0005166534633 27.279302862260185 28.927427410188404 23.792753074088107 51 20.114180415389384 27.515241277167362 26.86684118072538 25.503737126717873 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 34.0 1 135.0 2 236.0 3 397.5 4 559.0 5 394.0 6 229.0 7 227.5 8 226.0 9 215.5 10 205.0 11 210.5 12 216.0 13 224.5 14 233.0 15 262.5 16 292.0 17 275.5 18 259.0 19 284.5 20 310.0 21 355.0 22 400.0 23 551.0 24 702.0 25 830.0 26 1113.0 27 1268.0 28 1534.0 29 1800.0 30 2018.0 31 2236.0 32 2533.5 33 2831.0 34 3203.0 35 3575.0 36 3872.0 37 4169.0 38 4593.0 39 5017.0 40 5514.5 41 6012.0 42 6830.0 43 7648.0 44 8338.0 45 9028.0 46 9216.0 47 9404.0 48 9745.5 49 10087.0 50 9596.5 51 9106.0 52 8363.5 53 7621.0 54 7013.0 55 6405.0 56 5976.5 57 5548.0 58 5344.0 59 5140.0 60 4715.5 61 4291.0 62 3757.0 63 3223.0 64 2643.5 65 2064.0 66 1815.5 67 1567.0 68 1322.0 69 1077.0 70 959.0 71 841.0 72 699.0 73 557.0 74 451.0 75 255.0 76 165.0 77 133.5 78 102.0 79 85.5 80 69.0 81 51.5 82 34.0 83 25.0 84 16.0 85 14.0 86 12.0 87 11.0 88 10.0 89 5.5 90 1.0 91 2.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 116132.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.99855337030276 #Duplication Level Percentage of deduplicated Percentage of total 1 69.03150976222695 33.82444115317053 2 10.783262745373706 10.56728550270382 3 6.061191852802137 8.909688974615094 4 3.9013760258685832 7.646471256845658 5 2.6729697906964485 6.548582647332346 6 2.013953570110539 5.920848689422382 7 1.5078291127005605 5.171701167636827 8 1.0790292251726623 4.22966968621913 9 0.8822030472910039 3.8904005786518785 >10 2.049101101875121 12.51420797024076 >50 0.014059012705832733 0.4658492060758447 >100 0.0035147531764581834 0.31085316708573 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 252 0.2169944545861606 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0809423759170599 0.0 2 0.0 0.0 0.0 0.34357455309475426 0.0 3 0.0 0.0 0.0 0.4537939585988358 0.0 4 0.0 0.0 0.0 0.6062067302724486 0.0 5 0.0 0.0 0.0 1.066028312609789 0.0 6 0.0 0.0 0.0 1.4147694003375468 0.0 7 0.0 0.0 0.0 1.7092618744187649 0.0 8 0.0 0.0 0.0 2.5014638514793512 0.0 9 0.0 0.0 0.0 2.8777597905831294 0.0 10 0.0 0.0 0.0 3.6492956291117005 0.0 11 0.0 0.0 0.0 4.455275031860297 0.0 12 0.0 0.0 0.0 5.058898494816243 0.0 13 0.0 0.0 0.0 5.321530671993938 0.0 14 0.0 0.0 0.0 5.44552750318603 0.0 15 0.0 0.0 0.0 5.60827334412565 0.0 16 0.0 0.0 0.0 6.02762373850446 0.0 17 0.0 0.0 0.0 6.5132779940068195 0.0 18 0.0 0.0 0.0 7.103985120380257 0.0 19 0.0 0.0 0.0 7.435504425998002 0.0 20 0.0 0.0 0.0 7.7764957117762545 0.0 21 0.0 0.0 0.0 8.170013432990046 0.0 22 0.0 0.0 0.0 8.641029173698895 0.0 23 0.0 0.0 0.0 9.097406399614233 0.0 24 0.0 0.0 0.0 9.462508180346502 0.0 25 0.0 0.0 0.0 9.820721248234767 0.0 26 0.0 0.0 0.0 10.110908276788482 0.0 27 0.0 0.0 0.0 10.389901146970688 0.0 28 0.0 0.0 0.0 10.722281541693935 0.0 29 0.0 0.0 0.0 11.028829263252161 0.0 30 0.0 0.0 0.0 11.387903420245927 0.0 31 0.0 0.0 0.0 11.740088864395688 0.0 32 0.0 0.0 0.0 12.087107773912445 0.0 33 0.0 0.0 0.0 12.427237970585196 0.0 34 0.0 0.0 0.0 12.752729652464437 0.0 35 0.0 0.0 0.0 13.111803809458202 0.0 36 0.0 0.0 0.0 13.469155788240966 0.0 37 0.0 0.0 0.0 13.79636964833121 0.0 38 0.0 0.0 0.0 14.127888953948954 0.0 39 0.0 0.0 0.0 14.474046774360211 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGATA 35 1.1993507E-7 45.000004 19 CGGGTAC 20 7.0070836E-4 45.000004 6 GGCGTGC 20 7.0070836E-4 45.000004 15 TGACGGG 35 1.1993507E-7 45.000004 3 ACGGGTA 20 7.0070836E-4 45.000004 5 AACGGGA 20 7.0070836E-4 45.000004 4 ACTAGAT 35 1.1993507E-7 45.000004 18 CGGGATC 20 7.0070836E-4 45.000004 6 GACGGGC 20 7.0070836E-4 45.000004 4 ACCACGC 20 7.0070836E-4 45.000004 25 GATTGAG 20 7.0070836E-4 45.000004 1 CAACTAG 35 1.1993507E-7 45.000004 16 GATTCCG 20 7.0070836E-4 45.000004 12 ACGGTTA 20 7.0070836E-4 45.000004 34 CGAAAGG 30 2.1486212E-6 44.999996 3 TAAGGAT 30 2.1486212E-6 44.999996 5 AGGCGAT 60 3.6379788E-12 41.249996 7 CGTTTTT 115 0.0 41.08696 1 TGCATGG 50 1.0641088E-9 40.5 2 AAGGCGA 50 1.0641088E-9 40.5 6 >>END_MODULE