SRR2936493.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936493.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	180728
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	378	0.20915408791111503	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	35	1.2043347E-7	45.000004	1
ACGGGAC	20	7.017495E-4	45.000004	5
CACTAGG	20	7.017495E-4	45.000004	3
CGGGCCC	20	7.017495E-4	45.000004	6
GGACGAG	20	7.017495E-4	45.000004	8
TTACGGG	20	7.017495E-4	45.000004	3
CACCGCG	20	7.017495E-4	45.000004	12
TGCGTAG	30	2.1553224E-6	45.000004	1
TATGGGC	25	3.877723E-5	45.0	4
AGGCGAT	45	3.8016879E-10	45.0	7
CGTTTTA	50	2.1827873E-11	45.0	1
ATTGGGC	55	6.002665E-11	40.909092	4
TTGATCC	45	1.9128493E-8	40.0	17
GGACCGA	75	0.0	39.000004	8
TAACACT	35	6.2191084E-6	38.57143	29
GCGGGAT	35	6.2191084E-6	38.57143	5
GCGCGAC	30	1.1361185E-4	37.500004	9
GCGATCA	30	1.1361185E-4	37.500004	9
AAGGCGA	30	1.1361185E-4	37.500004	6
GGATGAC	90	0.0	37.5	8