##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936487.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 337179 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80983394576768 33.0 31.0 34.0 30.0 34.0 2 31.900960617357548 33.0 31.0 34.0 30.0 34.0 3 31.84367057260387 33.0 31.0 34.0 30.0 34.0 4 35.5938418466156 37.0 35.0 37.0 33.0 37.0 5 34.66804575611174 37.0 35.0 37.0 33.0 37.0 6 35.18485730131473 37.0 35.0 37.0 33.0 37.0 7 35.773657315550494 37.0 35.0 37.0 35.0 37.0 8 35.7543115081307 37.0 35.0 37.0 35.0 37.0 9 37.62288280112344 39.0 37.0 39.0 35.0 39.0 10 37.36590060472331 39.0 37.0 39.0 34.0 39.0 11 37.30805595840785 39.0 37.0 39.0 34.0 39.0 12 37.19654842086844 39.0 37.0 39.0 34.0 39.0 13 37.08941838014823 39.0 37.0 39.0 33.0 39.0 14 37.92728194816403 40.0 37.0 41.0 33.0 41.0 15 38.074034859822234 40.0 37.0 41.0 33.0 41.0 16 38.1578093534888 40.0 37.0 41.0 33.0 41.0 17 38.16252494965582 40.0 37.0 41.0 33.0 41.0 18 38.05583977649854 39.0 37.0 41.0 33.0 41.0 19 37.84727993143108 39.0 37.0 41.0 33.0 41.0 20 37.6818277532112 39.0 35.0 41.0 33.0 41.0 21 37.58604480112937 39.0 35.0 41.0 33.0 41.0 22 37.66648278807399 39.0 35.0 41.0 33.0 41.0 23 37.66773434881769 39.0 35.0 41.0 33.0 41.0 24 37.61452225672417 39.0 35.0 41.0 33.0 41.0 25 37.48154244481418 39.0 35.0 41.0 33.0 41.0 26 37.52294182022012 39.0 35.0 41.0 33.0 41.0 27 37.522235963686946 39.0 35.0 41.0 33.0 41.0 28 37.42333300709712 39.0 35.0 41.0 33.0 41.0 29 37.36669246898531 39.0 35.0 41.0 33.0 41.0 30 37.143754504284075 39.0 35.0 41.0 33.0 41.0 31 37.022961097814516 39.0 35.0 41.0 32.0 41.0 32 36.835235883610785 39.0 35.0 41.0 32.0 41.0 33 36.42030197610171 39.0 35.0 41.0 31.0 41.0 34 36.10422060685867 39.0 35.0 41.0 30.0 41.0 35 35.87379107239775 39.0 35.0 41.0 29.0 41.0 36 35.682563267581905 39.0 35.0 41.0 27.0 41.0 37 35.579214601146575 39.0 35.0 41.0 26.0 41.0 38 35.46691519934515 39.0 35.0 41.0 25.0 41.0 39 35.35345321031262 39.0 35.0 41.0 24.0 41.0 40 35.167261306309115 38.0 35.0 40.0 23.0 41.0 41 34.992899913695695 38.0 34.0 40.0 23.0 41.0 42 35.000424107076654 38.0 34.0 40.0 23.0 41.0 43 34.868740342666655 38.0 34.0 40.0 23.0 41.0 44 34.72185397073958 38.0 34.0 40.0 22.0 41.0 45 34.66775510930396 38.0 34.0 40.0 23.0 41.0 46 34.5179177825428 38.0 34.0 40.0 22.0 41.0 47 34.37894708745207 38.0 34.0 40.0 21.0 41.0 48 34.30557656319047 37.0 34.0 40.0 21.0 41.0 49 34.2682670035797 37.0 34.0 40.0 21.0 41.0 50 34.11354503097761 37.0 34.0 40.0 20.0 41.0 51 32.90005605331293 36.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 7.0 11 6.0 12 5.0 13 5.0 14 6.0 15 11.0 16 27.0 17 54.0 18 101.0 19 218.0 20 414.0 21 644.0 22 965.0 23 1493.0 24 2274.0 25 3853.0 26 5760.0 27 6606.0 28 6644.0 29 6706.0 30 7132.0 31 8286.0 32 10258.0 33 14008.0 34 22763.0 35 24240.0 36 25944.0 37 36828.0 38 63365.0 39 88494.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.77103556271298 19.982264613157994 22.28104359998695 19.965656224142073 2 39.068565954581985 23.739616049635355 21.634799320242365 15.557018675540291 3 28.771068186334265 22.803614697237965 33.688337648548696 14.73697946787908 4 26.28188588257276 21.93641952790654 34.65488657360037 17.12680801592033 5 22.849880923782322 25.85392328703745 32.384875689173995 18.91132010000623 6 22.940930484994617 29.36422493690295 33.349051987223405 14.345792590879029 7 66.68208874218145 6.183362546303299 20.897505479285485 6.237043232229765 8 65.42222380397355 7.155546460485381 20.338158663499208 7.084071072041853 9 59.84506745675146 7.038398002248064 23.030793732705774 10.085740808294704 10 34.834316490647396 19.715047497026802 29.425320082211528 16.025315930114274 11 26.181345813351363 20.741208675510634 33.28884657704068 19.78859893409732 12 23.831851924348786 18.053615438683902 38.01482298719671 20.0997096497706 13 22.351629253304626 19.59463667666136 40.81570916338207 17.238024906651955 14 17.40084643468306 23.51866516004852 39.651639040391004 19.428849364877408 15 16.14543017210443 22.313370642892945 43.0370811942618 18.504117990740824 16 20.44196109484873 23.02426900844952 36.709878135945594 19.823891760756158 17 19.612431379178418 23.715000044486757 34.661411297856624 22.011157278478198 18 20.570082952971568 23.075280488998427 36.81249425379398 19.54214230423603 19 19.425587002749282 25.518493144590852 34.49621714282325 20.559702709836614 20 18.701639188680197 27.945097411167364 34.32420168515833 19.029061714994114 21 19.005928601721934 26.353361271016283 36.79974138365675 17.84096874360503 22 17.346276013630742 22.689728601128778 37.198342720038916 22.765652665201568 23 17.029530308827063 25.33639402216627 36.586204953452025 21.047870715554645 24 19.57565566064316 24.033821797917426 34.80139629099084 21.589126250448576 25 20.010142980434726 25.32986929791001 32.35225206789272 22.307735653762542 26 18.22948641522752 23.919639123432955 33.76337197749563 24.087502483843892 27 19.730469572541587 24.418780529036503 34.118672871086275 21.732077027335627 28 16.485012411805005 23.85735766462324 34.04719748264275 25.610432440929003 29 20.948220381459105 24.149190785903038 31.196782717784917 23.705806114852944 30 21.66030506051682 25.420325702371738 32.07584102212771 20.843528214983735 31 20.363071247023097 25.18335958051955 31.362570029568865 23.090999142888496 32 21.55205395353803 24.499449847113848 29.79693278644281 24.15156341290531 33 20.804379869446198 25.24237867720113 29.5110312326687 24.442210220683968 34 19.009190963850063 22.852550129159884 34.13795046547976 24.000308441510295 35 18.91962429451419 25.347070843676505 32.28730140370545 23.446003458103856 36 22.987789868289543 25.972554637151184 30.1172374317499 20.922418062809367 37 18.65062770813129 26.012592717814577 32.273362220067085 23.063417353987052 38 19.54570124473944 25.6540294620958 30.701200252684774 24.099069040479982 39 21.671575038777622 23.147052455817235 30.832287894560455 24.349084610844685 40 22.463735879162105 22.303880134883844 34.8399514797778 20.392432506176245 41 20.755741015899567 23.054816581103804 32.67018408619754 23.51925831679909 42 21.8557502098292 22.166860925502476 34.05876403927884 21.918624825389482 43 22.0906402830544 22.130974942093072 32.54117249294885 23.237212281903677 44 21.185779660061865 21.798807161774604 31.13183205359765 25.883581124565886 45 20.749512870018595 20.73409079450381 30.660272436895536 27.85612389858206 46 22.71108224414925 21.84388707481783 31.30651671664012 24.1385139643928 47 18.597836757330676 22.38276998270948 35.31269740998105 23.706695849978797 48 18.784087977009246 23.60200368350342 33.087766438597896 24.52614190088944 49 21.2059469895812 21.06388594782 33.999151785846685 23.73101527675211 50 19.43448435400781 20.037428190960885 34.16078700037665 26.367300454654654 51 18.48276434772035 19.938371013615914 32.42580350496324 29.153061133700497 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 341.0 1 469.5 2 598.0 3 5816.0 4 11034.0 5 7101.5 6 3169.0 7 2970.0 8 2771.0 9 2716.0 10 2661.0 11 2643.0 12 2625.0 13 2487.0 14 2349.0 15 2220.0 16 2091.0 17 2014.5 18 1938.0 19 1802.5 20 1667.0 21 1738.0 22 1809.0 23 1917.0 24 2025.0 25 2034.5 26 2527.5 27 3011.0 28 3215.0 29 3419.0 30 3808.5 31 4198.0 32 4689.0 33 5180.0 34 5972.5 35 6765.0 36 7543.0 37 8321.0 38 8883.5 39 9446.0 40 10595.5 41 11745.0 42 13542.5 43 15340.0 44 17351.0 45 19362.0 46 27400.5 47 35439.0 48 37493.5 49 39548.0 50 39301.5 51 39055.0 52 32792.5 53 26530.0 54 22564.0 55 18598.0 56 16588.0 57 14578.0 58 13364.5 59 12151.0 60 10224.0 61 8297.0 62 7204.5 63 6112.0 64 5449.5 65 4787.0 66 3958.0 67 3129.0 68 2543.0 69 1957.0 70 1619.5 71 1282.0 72 1050.5 73 819.0 74 663.0 75 378.5 76 250.0 77 170.0 78 90.0 79 73.5 80 57.0 81 51.5 82 46.0 83 40.0 84 34.0 85 19.0 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 337179.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.72718812040537 #Duplication Level Percentage of deduplicated Percentage of total 1 76.00668371588179 33.235585572525146 2 10.599141615917647 9.269413187080966 3 3.9554407365181663 5.188809035545338 4 2.0408286491479863 3.5695879305122706 5 1.2900097567215194 2.820424965466012 6 0.8443654956077833 2.2153037321292515 7 0.6693875462870547 2.0489304613365418 8 0.5725325133336091 2.0028189532469773 9 0.4680103324955666 1.84182982661944 >10 3.4493227252049805 26.13407561187646 >50 0.056201193307534175 1.695096731590685 >100 0.036564631790443926 2.8095673163430583 >500 0.004739859676539027 1.4123338706877848 >1k 0.00609410529840732 3.6717719770228965 >5k 6.771228109341467E-4 2.0844508280171916 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7040 2.0879117620017857 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCC 1583 0.4694835680751174 No Hit GAATCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC 1570 0.46562804919642087 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGC 1566 0.4644417356952835 No Hit CCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 1540 0.45673069793789056 TruSeq Adapter, Index 27 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 1460 0.43300442791514304 TruSeq Adapter, Index 27 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCG 1422 0.4217344496543379 No Hit CTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGCT 1208 0.35826667734348816 TruSeq Adapter, Index 20 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTG 1043 0.3093312454215713 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCT 1009 0.2992475806619036 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTT 851 0.2523881973669772 No Hit CGTTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC 721 0.2138330085800124 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCG 696 0.20641854919790378 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTC 672 0.1993006681910795 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 643 0.19069989530783352 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGC 604 0.17913333867174408 No Hit CGTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCT 583 0.17290519279077288 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGT 481 0.14265419851176972 No Hit TCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 411 0.1218937122418656 TruSeq Adapter, Index 27 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCT 371 0.11003057723049181 No Hit GGGGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC 367 0.10884426372935443 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 351 0.10409900972480493 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9657837528434454E-4 0.0 0.0 0.38733135812135394 0.0 2 2.9657837528434454E-4 0.0 0.0 1.5763140646362912 0.0 3 2.9657837528434454E-4 0.0 0.0 2.349197310627293 0.0 4 2.9657837528434454E-4 0.0 0.0 3.366461137852595 0.0 5 2.9657837528434454E-4 0.0 0.0 6.149552611520884 0.0 6 2.9657837528434454E-4 0.0 0.0 8.195350244232293 0.0 7 2.9657837528434454E-4 0.0 0.0 10.110356813443305 0.0 8 2.9657837528434454E-4 0.0 0.0 12.43790390267484 0.0 9 2.9657837528434454E-4 0.0 0.0 13.597821928411912 0.0 10 2.9657837528434454E-4 0.0 0.0 15.93367321215141 0.0 11 2.9657837528434454E-4 0.0 0.0 18.59665044382954 0.0 12 2.9657837528434454E-4 0.0 0.0 20.924197533061076 0.0 13 2.9657837528434454E-4 0.0 0.0 21.761734864864064 0.0 14 2.9657837528434454E-4 0.0 0.0 22.27333256222956 0.0 15 2.9657837528434454E-4 0.0 0.0 22.908603442088623 0.0 16 2.9657837528434454E-4 0.0 0.0 23.882863404897694 0.0 17 5.931567505686891E-4 0.0 0.0 24.98494864745432 0.0 18 5.931567505686891E-4 0.0 0.0 26.190836321360464 0.0 19 8.897351258530335E-4 0.0 0.0 26.99130135625291 0.0 20 8.897351258530335E-4 0.0 0.0 27.76003250498993 0.0 21 8.897351258530335E-4 0.0 0.0 28.668452068485877 0.0 22 8.897351258530335E-4 0.0 0.0 29.580133994109953 0.0 23 8.897351258530335E-4 0.0 0.0 30.369922207492163 0.0 24 8.897351258530335E-4 0.0 0.0 31.06599165428452 0.0 25 8.897351258530335E-4 0.0 0.0 31.702152269269437 0.0 26 8.897351258530335E-4 0.0 0.0 32.28433561995261 0.0 27 8.897351258530335E-4 0.0 0.0 32.972100872237 0.0 28 8.897351258530335E-4 0.0 0.0 33.58334890369804 0.0 29 8.897351258530335E-4 0.0 0.0 34.2281102915662 0.0 30 8.897351258530335E-4 0.0 0.0 35.012856672568574 0.0 31 8.897351258530335E-4 0.0 0.0 35.621435498652055 0.0 32 8.897351258530335E-4 0.0 0.0 36.19620438995311 0.0 33 8.897351258530335E-4 0.0 0.0 36.786395356768956 0.0 34 8.897351258530335E-4 0.0 0.0 37.38518709646805 0.0 35 8.897351258530335E-4 0.0 0.0 38.05812342998823 0.0 36 8.897351258530335E-4 0.0 0.0 38.61598735389808 0.0 37 8.897351258530335E-4 0.0 0.0 39.18749388307101 0.0 38 8.897351258530335E-4 0.0 0.0 39.86517547059574 0.0 39 8.897351258530335E-4 0.0 0.0 40.82994492539571 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTGC 20 7.026186E-4 45.000004 6 ACTATCC 20 7.026186E-4 45.000004 40 TAGAATT 30 2.1609212E-6 45.000004 42 GGCCGTG 20 7.026186E-4 45.000004 9 TTCACGG 20 7.026186E-4 45.000004 2 ACTTACG 20 7.026186E-4 45.000004 25 ACGGGTA 20 7.026186E-4 45.000004 5 CCATGAC 20 7.026186E-4 45.000004 20 TATCTAG 20 7.026186E-4 45.000004 1 CTACGAA 40 6.7902874E-9 45.000004 11 AGGCAAT 20 7.026186E-4 45.000004 11 CGCTACG 20 7.026186E-4 45.000004 27 GCTTACG 20 7.026186E-4 45.000004 1 TCGAGAG 20 7.026186E-4 45.000004 1 CTTACGG 20 7.026186E-4 45.000004 2 CTTACGC 20 7.026186E-4 45.000004 26 CGGGTAT 35 1.2085184E-7 45.0 6 TTCGTAG 50 2.1827873E-11 45.0 1 CGTTAGG 35 1.2085184E-7 45.0 2 TGCGTAG 25 3.884923E-5 45.0 1 >>END_MODULE