##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936484.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 796927 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04880873655931 33.0 31.0 34.0 30.0 34.0 2 32.084647652796306 33.0 31.0 34.0 30.0 34.0 3 32.114809763002135 33.0 31.0 34.0 30.0 34.0 4 35.79415178554623 37.0 35.0 37.0 35.0 37.0 5 34.80511138410419 37.0 35.0 37.0 33.0 37.0 6 35.28832879297602 37.0 35.0 37.0 33.0 37.0 7 35.80924225179972 37.0 35.0 37.0 35.0 37.0 8 35.761752331142 37.0 35.0 37.0 35.0 37.0 9 37.65804521618668 39.0 37.0 39.0 35.0 39.0 10 37.382610954328314 39.0 37.0 39.0 34.0 39.0 11 37.294808683856864 39.0 37.0 39.0 34.0 39.0 12 37.16515816379668 39.0 37.0 39.0 34.0 39.0 13 37.06181118220364 39.0 37.0 39.0 33.0 39.0 14 38.1243840401944 40.0 37.0 41.0 33.0 41.0 15 38.18015326372428 40.0 37.0 41.0 33.0 41.0 16 38.30207911138661 40.0 37.0 41.0 34.0 41.0 17 38.213697114039306 40.0 37.0 41.0 33.0 41.0 18 38.16354697481702 40.0 37.0 41.0 34.0 41.0 19 38.07472453562246 40.0 37.0 41.0 34.0 41.0 20 37.93939093543072 40.0 36.0 41.0 33.0 41.0 21 37.9303976399344 40.0 36.0 41.0 33.0 41.0 22 37.963938980609264 40.0 36.0 41.0 33.0 41.0 23 37.95135062559055 40.0 36.0 41.0 34.0 41.0 24 37.84872642036222 40.0 36.0 41.0 33.0 41.0 25 37.76645916125317 40.0 36.0 41.0 33.0 41.0 26 37.707118719782365 40.0 36.0 41.0 33.0 41.0 27 37.71169002932515 40.0 36.0 41.0 33.0 41.0 28 37.59224119649604 40.0 35.0 41.0 33.0 41.0 29 37.50203218111571 40.0 35.0 41.0 33.0 41.0 30 37.40437455375461 40.0 35.0 41.0 33.0 41.0 31 37.333701832162795 40.0 35.0 41.0 33.0 41.0 32 37.20447669610893 40.0 35.0 41.0 32.0 41.0 33 37.03953812582583 40.0 35.0 41.0 32.0 41.0 34 36.86868558851689 40.0 35.0 41.0 31.0 41.0 35 36.7760798667883 39.0 35.0 41.0 31.0 41.0 36 36.731541282953145 39.0 35.0 41.0 31.0 41.0 37 36.67701433130011 39.0 35.0 41.0 31.0 41.0 38 36.53698393955783 39.0 35.0 41.0 31.0 41.0 39 36.46390572787721 39.0 35.0 41.0 30.0 41.0 40 36.237739466726566 39.0 35.0 41.0 30.0 41.0 41 36.174511592655286 39.0 35.0 41.0 30.0 41.0 42 36.21736495312619 39.0 35.0 41.0 30.0 41.0 43 36.15537935093177 39.0 35.0 41.0 30.0 41.0 44 36.039789089841356 39.0 35.0 41.0 30.0 41.0 45 36.013904661280144 38.0 35.0 41.0 30.0 41.0 46 35.870456139646414 38.0 35.0 40.0 29.0 41.0 47 35.683327331110625 38.0 35.0 40.0 29.0 41.0 48 35.6614646008982 38.0 35.0 40.0 29.0 41.0 49 35.684326167892415 38.0 35.0 40.0 29.0 41.0 50 35.544596932968766 38.0 35.0 40.0 28.0 41.0 51 34.37805344780639 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 16.0 10 20.0 11 23.0 12 24.0 13 28.0 14 26.0 15 39.0 16 64.0 17 128.0 18 277.0 19 492.0 20 963.0 21 1643.0 22 2521.0 23 3529.0 24 4571.0 25 6055.0 26 7707.0 27 8945.0 28 9309.0 29 10439.0 30 12499.0 31 15996.0 32 21303.0 33 29920.0 34 51660.0 35 61434.0 36 60578.0 37 89094.0 38 149753.0 39 247682.0 40 180.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.4752731429604 19.2007548997587 21.634352958301072 12.689618998979832 2 32.17659835844437 28.59007161258183 22.66405831399865 16.569271714975148 3 30.248567309176373 28.265826104524006 25.72883087158548 15.756775714714147 4 26.783130700804463 23.119558002175857 31.70528793728911 18.392023359730565 5 27.42610050857858 28.50612414938884 24.257052402541262 19.81072293949132 6 24.154408120191686 36.129156120949595 25.63346454568612 14.082971213172598 7 73.74263891171964 5.965163685005026 15.316584831483937 4.975612571791394 8 73.75932801875203 9.627230599540484 11.270292009180263 5.34314937252722 9 68.03170177444106 7.203169173588045 12.336638111144433 12.42849094082645 10 41.64848223237511 22.8260555860198 19.579083153162085 15.946379028443006 11 31.484063157604147 23.546573274591022 25.451139188407467 19.51822437939736 12 25.976783318923818 20.529483879953872 30.63743605123179 22.856296749890518 13 24.970794062693322 21.941783877318752 33.76971792899475 19.317704130993178 14 20.275006368211894 27.8119576824477 30.18218732707011 21.730848622270297 15 18.082710210596453 24.080499217619682 35.39834890774186 22.438441664042003 16 22.38536277475854 24.520439136834366 29.07380475250556 24.02039333590153 17 22.85855542603024 25.311603195775774 28.985967347071938 22.84387403112205 18 23.039876927246787 24.98171099736864 29.116970563175798 22.86144151220877 19 23.094461600623394 26.75615206913557 26.2608745844977 23.888511745743337 20 24.97556237898829 26.883892753037607 28.734375921508494 19.40616894646561 21 24.31979340642242 28.223538667908105 28.530718622910257 18.925949302759225 22 22.80560201875454 22.299658563456877 30.44431924128559 24.450420176502995 23 22.982280685683882 26.117699613640898 29.870991947819565 21.029027752855654 24 23.644198276630103 25.139065435102587 27.938694510287643 23.278041777979663 25 22.44923311670956 29.291641517980942 26.33704216320943 21.92208320210007 26 20.834656122831827 25.130156212551462 28.622571452592272 25.412616212024442 27 23.061334350574143 25.07996340944654 28.747175086300253 23.11152715367907 28 18.89909615309809 26.49176147878036 30.537677855060753 24.071464513060796 29 21.831610674503434 27.220435497856137 27.778203022359637 23.169750805280785 30 22.357505769035306 25.922198645547205 31.222809617443005 20.497485967974484 31 24.19518977271444 26.41120202979696 26.093356104135008 23.300252093353592 32 24.240990705547684 27.6321419653243 25.446119908096975 22.680747421031036 33 24.494966289258617 23.83744056858407 25.178843231563242 26.488749910594066 34 21.85407195389289 26.00639707275572 27.243775151299932 24.895755822051456 35 21.100050569249127 27.627875577060383 26.74510965245248 24.526964201238005 36 22.615120330971344 29.379102477391278 24.870910384514517 23.13486680712286 37 20.613556825154625 25.829969369841905 28.13833638463749 25.418137420365984 38 22.42150159299409 28.474502683432735 24.783700389119705 24.32029533445347 39 22.54020757233724 24.253413424316154 25.088119739951086 28.11825926339552 40 23.553098338994662 24.241618115586498 28.577397929797836 23.627885615621004 41 19.905210891336345 25.506100307807365 26.745235134460245 27.843453666396044 42 20.569763604445576 26.436172949341657 29.227771176029925 23.76629227018284 43 22.13013237096999 24.0944277204813 27.140754422927067 26.634685485621645 44 22.780631099209838 23.240020729627684 28.458064540415872 25.521283630746606 45 22.176435231834283 23.222327766533198 27.068476786455975 27.53276021517655 46 25.028515786263988 24.488441224854974 26.163124100450858 24.319918888430184 47 20.14337574206922 24.920601259588395 31.44968108747727 23.48634191086511 48 20.58005312908209 26.807348728302593 27.716716838556106 24.895881304059216 49 22.121223148418864 23.446062186373407 30.428759472323065 24.003955192884668 50 21.820819221835876 23.17753068976205 29.63056842094696 25.371081667455115 51 20.772668010997243 23.36073442109503 27.640298295828853 28.226299272078876 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 340.0 1 720.5 2 1101.0 3 4448.5 4 7796.0 5 5113.5 6 2431.0 7 2381.0 8 2331.0 9 2340.0 10 2349.0 11 2328.0 12 2307.0 13 2293.5 14 2280.0 15 2170.0 16 2060.0 17 2111.5 18 2163.0 19 2238.5 20 2314.0 21 2397.0 22 2480.0 23 2661.0 24 2842.0 25 3665.5 26 5524.0 27 6559.0 28 7294.0 29 8029.0 30 9683.5 31 11338.0 32 13175.5 33 15013.0 34 16808.5 35 18604.0 36 19942.5 37 21281.0 38 23064.0 39 24847.0 40 27635.0 41 30423.0 42 33454.5 43 36486.0 44 41138.0 45 45790.0 46 70648.0 47 95506.0 48 84260.5 49 73015.0 50 71312.0 51 69609.0 52 61426.0 53 53243.0 54 49523.5 55 45804.0 56 44146.5 57 42489.0 58 40315.0 59 38141.0 60 35544.5 61 32948.0 62 29164.0 63 25380.0 64 22587.0 65 19794.0 66 17461.0 67 15128.0 68 13150.0 69 11172.0 70 9281.0 71 7390.0 72 6389.0 73 5388.0 74 4465.5 75 2525.0 76 1507.0 77 1029.5 78 552.0 79 455.0 80 358.0 81 262.5 82 167.0 83 129.5 84 92.0 85 57.5 86 23.0 87 16.5 88 10.0 89 6.0 90 2.0 91 3.0 92 4.0 93 3.5 94 3.0 95 4.0 96 5.0 97 2.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 796927.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.319908752673637 #Duplication Level Percentage of deduplicated Percentage of total 1 75.10407504163905 23.522527772580887 2 8.997536878335403 5.636040680565617 3 3.1696610505696374 2.978204846422341 4 1.6231164295960716 2.0334343387965754 5 1.0835838621247196 1.6968873843807957 6 0.845803517283426 1.589429339040439 7 0.706331736475101 1.5485571874862378 8 0.6088207656348485 1.5254568661133086 9 0.5308103508059648 1.4962438576995751 >10 7.181369915607973 46.51063137245024 >50 0.10047079293192514 2.062818183461222 >100 0.03913922435501227 2.2657763315126185 >500 0.004841965899589147 1.2501009242747962 >1k 0.0032279772663927645 2.150648759533814 >5k 8.069943165981911E-4 2.35701903949143 >10k+ 4.0349715829909557E-4 1.3762231161901064 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTC 10890 1.3664990645316322 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGC 9846 1.2354958484277732 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCG 8805 1.104869078347201 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4612 0.578723019799806 No Hit GCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 3099 0.3888687420554204 TruSeq Adapter, Index 16 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCT 2528 0.3172185156231374 No Hit GAATGACTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCT 1713 0.21495067929684902 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTC 1429 0.179313789092351 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATACGCACTCGTA 1337 0.16776944437821784 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATACGCACT 1232 0.15459383356317455 No Hit CCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 1068 0.13401478429015456 TruSeq Adapter, Index 16 (95% over 21bp) TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 998 0.12523104374679236 No Hit CTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGCT 957 0.12008628142853738 TruSeq Adapter, Index 13 (95% over 22bp) GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 930 0.11669826721895482 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 911 0.1143141090714708 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 903 0.11331025300937225 No Hit GAATGCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTT 876 0.1099222387997897 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 870 0.10916934675321578 No Hit CGCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTG 839 0.10527940451258395 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.76446023286951E-4 0.0 0.0 0.1269877918554648 0.0 2 3.76446023286951E-4 0.0 0.0 0.7761062180099306 0.0 3 3.76446023286951E-4 0.0 0.0 1.100853654098807 0.0 4 3.76446023286951E-4 0.0 0.0 1.7817190282171391 0.0 5 3.76446023286951E-4 0.0 0.0 4.073020489957048 0.0 6 3.76446023286951E-4 0.0 0.0 4.976239981830205 0.0 7 5.01928031049268E-4 0.0 0.0 5.814961721713532 0.0 8 5.01928031049268E-4 0.0 0.0 6.842533883279146 0.0 9 5.01928031049268E-4 0.0 0.0 7.253738422716259 0.0 10 5.01928031049268E-4 0.0 0.0 9.117648166017716 0.0 11 5.01928031049268E-4 0.0 0.0 10.060645454351528 0.0 12 5.01928031049268E-4 0.0 0.0 12.137372682817874 0.0 13 5.01928031049268E-4 0.0 0.0 12.544185351983305 0.0 14 5.01928031049268E-4 0.0 0.0 12.75662639112491 0.0 15 5.01928031049268E-4 0.0 0.0 13.193931188176583 0.0 16 5.01928031049268E-4 0.0 0.0 13.683060054434096 0.0 17 5.01928031049268E-4 0.0 0.0 14.191764113902527 0.0 18 5.01928031049268E-4 0.0 0.0 14.754299954700995 0.0 19 5.01928031049268E-4 0.0 0.0 15.302781810630083 0.0 20 5.01928031049268E-4 0.0 0.0 15.697171761027045 0.0 21 5.01928031049268E-4 0.0 0.0 16.142758370591032 0.0 22 5.01928031049268E-4 0.0 0.0 16.67542949354207 0.0 23 5.01928031049268E-4 0.0 0.0 17.142724490448938 0.0 24 5.01928031049268E-4 0.0 0.0 17.563967590507033 0.0 25 6.27410038811585E-4 0.0 0.0 17.915066248225997 0.0 26 6.27410038811585E-4 0.0 0.0 18.26440815783629 0.0 27 6.27410038811585E-4 0.0 0.0 18.668083776807663 0.0 28 6.27410038811585E-4 0.0 0.0 19.025582016922503 0.0 29 6.27410038811585E-4 0.0 0.0 19.404286716349176 0.0 30 6.27410038811585E-4 0.0 0.0 19.910104689639077 0.0 31 7.52892046573902E-4 0.0 0.0 20.31202356050178 0.0 32 7.52892046573902E-4 0.0 0.0 20.720091049744834 0.0 33 7.52892046573902E-4 0.0 0.0 21.14447119999699 0.0 34 7.52892046573902E-4 0.0 0.0 21.574247076582925 0.0 35 7.52892046573902E-4 0.0 0.0 22.014437959813133 0.0 36 7.52892046573902E-4 0.0 0.0 22.39452296132519 0.0 37 7.52892046573902E-4 0.0 0.0 22.79054417782306 0.0 38 7.52892046573902E-4 0.0 0.0 23.229103794952362 0.0 39 7.52892046573902E-4 0.0 0.0 23.821880799621546 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 25 3.8897248E-5 45.0 1 GCGTAAG 45 3.8380676E-10 45.0 1 CGTAAGG 115 0.0 43.04348 2 TACGGCT 1140 0.0 42.039474 7 CGTTTTT 2440 0.0 40.85041 1 ACAACGA 330 0.0 40.227272 13 CACAACG 325 0.0 40.153847 12 CGATGAA 520 0.0 39.375004 19 GCTACGA 155 0.0 39.193546 10 CGGTCTA 70 0.0 38.571426 31 ACGGCTG 1250 0.0 38.34 8 CCGATGA 535 0.0 37.850468 18 TCACGCG 30 1.1396077E-4 37.500004 1 TTAACGG 60 1.546141E-10 37.500004 2 AACGAGC 370 0.0 37.094593 15 AGGGATC 510 0.0 37.058823 6 TGATACC 1040 0.0 36.995193 4 ACACGAC 55 2.746674E-9 36.81818 26 CTACGAA 165 0.0 36.81818 11 CCCGCAC 1070 0.0 36.799065 33 >>END_MODULE