SRR2936482.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936482.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	284444
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC	1877	0.6598838435685056	No Hit
CCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC	1704	0.5990634360366188	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGC	1227	0.43136786151228357	No Hit
CTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGCT	1131	0.39761780877782626	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCG	1095	0.38496153900240465	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTC	1069	0.3758208997201558	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	916	0.32203175317461435	No Hit
TCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC	675	0.23730505828915358	No Hit
ACTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC	546	0.19195342492722645	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCC	505	0.17753933990521858	No Hit
CGCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTG	389	0.1367580261844159	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	347	0.1219923781130908	No Hit
ACCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTG	291	0.10230484735132399	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGGT	30	2.1597207E-6	45.000004	4
AACGGGC	30	2.1597207E-6	45.000004	4
TGCGACG	30	2.1597207E-6	45.000004	1
CGTAAGG	30	2.1597207E-6	45.000004	2
TAAGCGG	30	2.1597207E-6	45.000004	2
CTTCGTT	20	7.0243253E-4	45.0	23
GTGTTCA	50	2.1827873E-11	45.0	11
CTTCGAT	35	1.207627E-7	45.0	42
CGGGTAT	55	1.8189894E-12	45.0	6
TACTTCG	20	7.0243253E-4	45.0	21
TTGTGCG	40	6.7848305E-9	45.0	1
GAGTCGG	20	7.0243253E-4	45.0	2
GCGAACG	20	7.0243253E-4	45.0	1
TAGCGGA	25	3.8833787E-5	45.0	1
GGCCGGT	35	1.207627E-7	45.0	9
TTGTCGC	20	7.0243253E-4	45.0	38
CGCGCCG	20	7.0243253E-4	45.0	15
ACTTCGT	20	7.0243253E-4	45.0	22
ACTTCGC	20	7.0243253E-4	45.0	43
AGGCGTT	20	7.0243253E-4	45.0	20