##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936480.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 388916 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90173199354102 33.0 31.0 34.0 30.0 34.0 2 31.975326291538533 33.0 31.0 34.0 30.0 34.0 3 32.026188174310136 33.0 31.0 34.0 30.0 34.0 4 35.68843143506567 37.0 35.0 37.0 33.0 37.0 5 34.675917164631954 37.0 35.0 37.0 33.0 37.0 6 35.15373756800955 37.0 35.0 37.0 33.0 37.0 7 35.68473912104413 37.0 35.0 37.0 33.0 37.0 8 35.60271626778019 37.0 35.0 37.0 33.0 37.0 9 37.491180614837134 39.0 37.0 39.0 35.0 39.0 10 37.24811784549877 39.0 37.0 39.0 34.0 39.0 11 37.11262586265415 39.0 37.0 39.0 34.0 39.0 12 36.77169620175051 39.0 35.0 39.0 33.0 39.0 13 36.47330271832478 39.0 35.0 39.0 32.0 39.0 14 37.27569192319164 40.0 36.0 41.0 31.0 41.0 15 37.34880539756657 40.0 35.0 41.0 32.0 41.0 16 37.68628701313394 40.0 36.0 41.0 33.0 41.0 17 37.583655596581266 39.0 35.0 41.0 33.0 41.0 18 37.66091649610713 39.0 36.0 41.0 33.0 41.0 19 37.60033271966183 39.0 36.0 41.0 33.0 41.0 20 37.362661860144605 39.0 35.0 41.0 32.0 41.0 21 37.44910726223657 39.0 35.0 41.0 33.0 41.0 22 37.53180892532063 39.0 35.0 41.0 33.0 41.0 23 37.5138924600685 39.0 35.0 41.0 33.0 41.0 24 37.50649240452951 39.0 35.0 41.0 33.0 41.0 25 37.43780147898261 39.0 35.0 41.0 33.0 41.0 26 37.34152361949624 39.0 35.0 41.0 33.0 41.0 27 37.29460346193008 39.0 35.0 41.0 33.0 41.0 28 37.1499064065248 39.0 35.0 41.0 32.0 41.0 29 37.10481440722418 39.0 35.0 41.0 32.0 41.0 30 37.0049162286972 39.0 35.0 41.0 32.0 41.0 31 36.91296063931543 39.0 35.0 41.0 31.0 41.0 32 36.749321190179884 39.0 35.0 41.0 31.0 41.0 33 36.60342079009349 39.0 35.0 41.0 31.0 41.0 34 36.48409939421366 39.0 35.0 41.0 31.0 41.0 35 36.44614004052289 39.0 35.0 41.0 31.0 41.0 36 36.31322959199416 39.0 35.0 41.0 30.0 41.0 37 36.254862232461505 39.0 35.0 41.0 30.0 41.0 38 36.04480916187557 38.0 35.0 41.0 30.0 41.0 39 36.0399237881702 38.0 35.0 41.0 30.0 41.0 40 35.848309146448074 38.0 35.0 40.0 29.0 41.0 41 35.7302939452221 38.0 35.0 40.0 28.0 41.0 42 35.85135864813996 38.0 35.0 40.0 29.0 41.0 43 35.855333799586546 38.0 35.0 40.0 30.0 41.0 44 35.83795215419268 38.0 35.0 40.0 29.0 41.0 45 35.80157669008218 38.0 35.0 40.0 29.0 41.0 46 35.71267831614025 38.0 35.0 40.0 29.0 41.0 47 35.43314494646659 37.0 34.0 40.0 28.0 41.0 48 35.39606238879347 37.0 34.0 40.0 28.0 41.0 49 35.46468389060877 37.0 34.0 40.0 28.0 41.0 50 35.31719188719415 37.0 34.0 40.0 28.0 41.0 51 34.099610198603294 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 11.0 10 10.0 11 7.0 12 5.0 13 12.0 14 2.0 15 12.0 16 16.0 17 67.0 18 135.0 19 328.0 20 688.0 21 1164.0 22 1693.0 23 1998.0 24 2569.0 25 3055.0 26 3625.0 27 3946.0 28 4594.0 29 5471.0 30 7108.0 31 9190.0 32 12735.0 33 18246.0 34 32342.0 35 37328.0 36 28279.0 37 40497.0 38 67428.0 39 106278.0 40 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.55774511719754 18.53227946394594 22.315358586429976 9.594616832426539 2 27.97339271205093 33.89189439364799 21.967468553620833 16.167244340680252 3 27.89574098262864 33.22568369519382 23.976128521325943 14.9024468008516 4 25.76494667228913 21.45938968826173 35.337707885507406 17.437955753941726 5 31.3453290684878 27.340608254738815 22.57325489308745 18.740807783685938 6 23.548786884571477 38.162482386942166 24.117804358781843 14.170926369704512 7 70.24344588548685 5.784282467165147 18.832858509292492 5.139413138055518 8 69.61297555256148 13.84052083226198 10.508181715331846 6.038321899844696 9 64.17092636970452 6.831809439570498 11.903084470682614 17.094179720042373 10 46.66534675868311 18.92310936037602 18.960392475495993 15.451151405444877 11 37.63743327608019 20.627590533688508 22.76841271637063 18.966563473860678 12 29.711043001573607 18.198274177457343 28.7164837651318 23.37419905583725 13 27.071912700943134 22.64884962305485 33.49103662487529 16.788201051126723 14 19.937467216571186 30.39910931923603 28.934011457486964 20.729412006705818 15 16.42411214761028 22.805695831490606 40.60799761388063 20.162194407018482 16 21.7861954766582 22.661962994579806 28.468615330816938 27.08322619794506 17 21.890073949130404 24.420440403583292 28.826790360900556 24.86269528638575 18 23.208867724650055 22.79746783367102 29.383208713449694 24.610455728229233 19 22.983626284339035 25.460510752964648 26.426786246901646 25.129076715794668 20 24.25948019623775 26.629914943072542 31.183854611278527 17.92675024941118 21 21.854847833465325 30.93932880107787 28.839646607493645 18.36617675796316 22 19.898641351860043 22.012465416696664 32.71529070544796 25.37360252599533 23 20.212848018595274 27.422116858139034 30.218607617068983 22.146427506196712 24 23.07670550967304 25.25789630665748 27.177848172870235 24.487550010799247 25 21.28480185952751 31.312417077209474 25.03651174032439 22.366269322938628 26 19.49084120992708 24.29367781217538 28.504098571413877 27.711382406483665 27 24.152773349515062 26.13674932376143 26.5134373489391 23.197039977784407 28 17.60971520842547 25.390572771498217 32.60755535899783 24.392156661078484 29 24.756502689526787 24.22476833043639 27.72860977691841 23.29011920311841 30 25.241440311018316 27.454771724485493 28.511298069506015 18.792489894990176 31 26.7577060342079 23.358514434993673 27.08374044780878 22.80003908298964 32 29.19396476359934 29.791265980314513 22.49020354009606 18.524565715990086 33 25.19670057287435 25.969875242983058 22.850435569634577 25.982988614508017 34 27.608789558670765 24.063550998158988 26.800903022760696 21.526756420409548 35 23.840880807166588 28.177549907949274 23.968414773370085 24.013154511514053 36 27.46608522148742 25.57698834709809 25.495993993561594 21.460932437852904 37 24.303705684517993 27.462999722305074 28.17523578356252 20.058058809614415 38 20.052659186045314 29.222505631036004 25.871396394079955 24.853438788838723 39 25.043196988552797 27.338037005420198 24.542317621285832 23.076448384741177 40 24.210883584115848 27.647872548313774 25.96036162050417 22.180882247066204 41 23.39708317477296 23.795112569295167 24.03552438058604 28.772279875345834 42 20.0696294315482 25.798115788499317 30.327114338314697 23.805140441637786 43 23.38114142899752 22.44494955208837 26.000987359738346 28.17292165917576 44 23.799226568204958 22.184739121044135 28.326168118565448 25.689866192185455 45 20.601363790638597 22.465005296773597 26.811702269898895 30.12192864268891 46 26.68159705437678 25.196443447942485 25.055538985282165 23.066420512398565 47 18.837229633134147 23.71360396589495 35.24514291003713 22.204023490933775 48 22.515916033282252 25.77291754517685 26.409301751535036 25.301864670005862 49 21.392794330909503 21.12204177765893 33.4761233788273 24.009040512604265 50 23.14998611525368 22.026864412880933 28.699256394697052 26.123893077168336 51 21.667403758138004 23.332287691943762 24.920291271122814 30.080017278795424 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 184.0 1 305.0 2 426.0 3 1016.0 4 1606.0 5 1092.5 6 579.0 7 587.5 8 596.0 9 640.0 10 684.0 11 653.5 12 623.0 13 656.5 14 690.0 15 692.5 16 695.0 17 614.0 18 533.0 19 579.5 20 626.0 21 684.5 22 743.0 23 823.5 24 904.0 25 994.5 26 1718.0 27 2351.0 28 2806.5 29 3262.0 30 3719.0 31 4176.0 32 4863.5 33 5551.0 34 6572.0 35 7593.0 36 7900.0 37 8207.0 38 9035.5 39 9864.0 40 11904.0 41 13944.0 42 17000.5 43 20057.0 44 22444.5 45 24832.0 46 45666.5 47 66501.0 48 53366.5 49 40232.0 50 39924.0 51 39616.0 52 33878.5 53 28141.0 54 25116.5 55 22092.0 56 21427.5 57 20763.0 58 19293.0 59 17823.0 60 15310.0 61 12797.0 62 11337.0 63 9877.0 64 8509.0 65 7141.0 66 6204.0 67 5267.0 68 4413.5 69 3560.0 70 3089.5 71 2619.0 72 1990.0 73 1361.0 74 1024.0 75 521.5 76 356.0 77 250.0 78 144.0 79 109.0 80 74.0 81 56.5 82 39.0 83 22.5 84 6.0 85 3.5 86 1.0 87 2.5 88 4.0 89 2.0 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 388916.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.155162589651052 #Duplication Level Percentage of deduplicated Percentage of total 1 74.91832822792497 23.34092696885847 2 10.361686297620686 6.45640042610664 3 3.7154544268806275 3.4726676029171415 4 1.8399779385044481 2.2929924734190816 5 1.136284225334689 1.7700559894178969 6 0.7246587086363433 1.3546115933743108 7 0.6087871635194188 1.327680414335798 8 0.4491363301150148 1.119433231172198 9 0.3680749723008658 1.0320692046493303 >10 5.649322826940095 41.07243281074776 >50 0.17700659708583466 3.410333349083016 >100 0.03970241429962647 2.3274996833094908 >500 0.003308534524968872 0.89110871400401 >1k 0.005789935418695526 3.056518350723413 >5k 0.001654267262484436 4.455285875192403 >10k+ 8.27133631242218E-4 2.61998331268906 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGC 10167 2.614189182239867 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCG 8947 2.300496765368357 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTC 8342 2.1449361815919117 No Hit GCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 2914 0.7492620514455564 TruSeq Adapter, Index 14 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCT 1761 0.45279700500879366 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTT 1705 0.4383980088245277 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAAGACT 1556 0.40008639397710555 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTA 1425 0.36640302790319756 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCT 1353 0.3478900328091413 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTC 1147 0.2949222968455913 No Hit CCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 996 0.2560964321344455 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 898 0.23089818881198 No Hit CTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGCT 889 0.22858406442522292 TruSeq Adapter, Index 15 (95% over 23bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 675 0.1735593290067778 No Hit TCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 461 0.1185345935883327 TruSeq Adapter, Index 14 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATG 431 0.1108208456324759 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.24683993458741735 0.0 2 0.0 0.0 0.0 1.5602340865379671 0.0 3 0.0 0.0 0.0 1.9778049758816814 0.0 4 0.0 0.0 0.0 2.8067757562044244 0.0 5 0.0 0.0 0.0 6.229879974081807 0.0 6 0.0 0.0 0.0 7.343230929043804 0.0 7 0.0 0.0 0.0 8.51340649394728 0.0 8 0.0 0.0 0.0 9.764576412387251 0.0 9 0.0 0.0 0.0 10.134836314268377 0.0 10 0.0 0.0 0.0 13.382067078752224 0.0 11 0.0 0.0 0.0 14.666663238334241 0.0 12 0.0 0.0 0.0 18.49422497403038 0.0 13 0.0 0.0 0.0 19.120581308045953 0.0 14 0.0 0.0 0.0 19.454586594534554 0.0 15 0.0 0.0 0.0 20.212590893663414 0.0 16 0.0 0.0 0.0 20.925855454648303 0.0 17 0.0 0.0 0.0 21.69928724968888 0.0 18 0.0 0.0 0.0 22.527486655216038 0.0 19 0.0 0.0 0.0 23.566271379938083 0.0 20 0.0 0.0 0.0 24.183371216406627 0.0 21 0.0 0.0 0.0 24.78530068189532 0.0 22 0.0 0.0 0.0 25.520935111952195 0.0 23 0.0 0.0 0.0 26.12029332812227 0.0 24 0.0 0.0 0.0 26.619372820866204 0.0 25 0.0 0.0 0.0 27.069598576556377 0.0 26 0.0 0.0 0.0 27.555050447911633 0.0 27 0.0 0.0 0.0 28.223575270752555 0.0 28 2.5712493186189306E-4 0.0 0.0 28.663773154100113 0.0 29 2.5712493186189306E-4 0.0 0.0 29.18779376523465 0.0 30 2.5712493186189306E-4 0.0 0.0 29.78792335620031 0.0 31 2.5712493186189306E-4 0.0 0.0 30.285717224284937 0.0 32 5.142498637237861E-4 0.0 0.0 30.721801108722705 0.0 33 5.142498637237861E-4 0.0 0.0 31.168684240298678 0.0 34 5.142498637237861E-4 0.0 0.0 31.717388844891957 0.0 35 5.142498637237861E-4 0.0 0.0 32.23138158368388 0.0 36 5.142498637237861E-4 0.0 0.0 32.7366320747925 0.0 37 5.142498637237861E-4 0.0 0.0 33.19739995268901 0.0 38 7.713747955856792E-4 0.0 0.0 33.75330405537443 0.0 39 7.713747955856792E-4 0.0 0.0 34.70363780353598 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTAG 30 2.1617834E-6 45.000004 1 CGGGATA 35 1.209155E-7 45.000004 6 GCGTGAA 30 2.1617834E-6 45.000004 36 CGGTAGT 60 0.0 45.000004 12 TCGACGT 30 2.1617834E-6 45.000004 26 TCACGAC 25 3.8860293E-5 45.0 25 AACGTTA 20 7.027524E-4 45.0 45 GAATCCC 25 3.8860293E-5 45.0 8 CGTCTCG 20 7.027524E-4 45.0 42 TTGTACG 20 7.027524E-4 45.0 1 ACGGGTA 40 6.7957444E-9 45.0 5 CGTTCAT 25 3.8860293E-5 45.0 17 ACGGGCT 40 6.7957444E-9 45.0 5 CGCCTTA 20 7.027524E-4 45.0 11 CGGGGTA 20 7.027524E-4 45.0 6 ACTAGGA 20 7.027524E-4 45.0 32 AGTGCCG 20 7.027524E-4 45.0 38 ATGACCG 20 7.027524E-4 45.0 1 CCGACTA 20 7.027524E-4 45.0 42 CGGTCTA 20 7.027524E-4 45.0 31 >>END_MODULE