##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936477.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 276496 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90516318500087 33.0 31.0 34.0 30.0 34.0 2 31.95289986111915 33.0 31.0 34.0 30.0 34.0 3 31.96866500781205 33.0 31.0 34.0 30.0 34.0 4 35.628681789248304 37.0 35.0 37.0 33.0 37.0 5 34.683250390602396 37.0 35.0 37.0 33.0 37.0 6 35.21672284590012 37.0 35.0 37.0 33.0 37.0 7 35.822348243735895 37.0 35.0 37.0 35.0 37.0 8 35.854811642844744 37.0 35.0 37.0 35.0 37.0 9 37.68625224234709 39.0 37.0 39.0 35.0 39.0 10 37.34102844164111 39.0 37.0 39.0 34.0 39.0 11 37.23653145072623 39.0 37.0 39.0 34.0 39.0 12 37.005696284937216 39.0 35.0 39.0 33.0 39.0 13 36.79440570568833 39.0 35.0 39.0 33.0 39.0 14 37.74139951391702 40.0 36.0 41.0 33.0 41.0 15 37.96504831896302 40.0 36.0 41.0 33.0 41.0 16 38.01729138938719 40.0 36.0 41.0 34.0 41.0 17 38.03508549852439 40.0 36.0 41.0 34.0 41.0 18 38.03507103176899 40.0 36.0 41.0 34.0 41.0 19 37.96565953937851 40.0 36.0 41.0 34.0 41.0 20 37.97132327411608 40.0 36.0 41.0 34.0 41.0 21 37.83771193796655 40.0 35.0 41.0 34.0 41.0 22 37.886341936230544 40.0 35.0 41.0 34.0 41.0 23 37.91901871998148 40.0 35.0 41.0 34.0 41.0 24 37.88989352468028 40.0 35.0 41.0 34.0 41.0 25 37.714386464903654 39.0 35.0 41.0 33.0 41.0 26 37.77263685550605 40.0 35.0 41.0 34.0 41.0 27 37.73748263989352 40.0 35.0 41.0 34.0 41.0 28 37.637705427926626 40.0 35.0 41.0 33.0 41.0 29 37.583820380765005 40.0 35.0 41.0 33.0 41.0 30 37.480654331346564 39.0 35.0 41.0 33.0 41.0 31 37.46056362479023 39.0 35.0 41.0 33.0 41.0 32 37.390294977142524 39.0 35.0 41.0 33.0 41.0 33 37.23319324691858 39.0 35.0 41.0 33.0 41.0 34 37.096363057693424 39.0 35.0 41.0 32.0 41.0 35 37.05640226260054 39.0 35.0 41.0 32.0 41.0 36 36.99731280018518 39.0 35.0 41.0 32.0 41.0 37 36.87658772640472 39.0 35.0 41.0 32.0 41.0 38 36.82249291128986 39.0 35.0 41.0 31.0 41.0 39 36.809548781899196 39.0 35.0 41.0 31.0 41.0 40 36.6665557548753 39.0 35.0 41.0 31.0 41.0 41 36.6196147503038 39.0 35.0 41.0 31.0 41.0 42 36.59442451247034 39.0 35.0 41.0 31.0 41.0 43 36.39217203865517 39.0 35.0 41.0 31.0 41.0 44 36.2429402233667 39.0 35.0 40.0 30.0 41.0 45 36.25282825067994 39.0 35.0 40.0 30.0 41.0 46 36.136515537295296 38.0 35.0 40.0 30.0 41.0 47 36.071444071523636 38.0 35.0 40.0 30.0 41.0 48 36.06602988831665 38.0 35.0 40.0 30.0 41.0 49 36.01143958682947 38.0 35.0 40.0 30.0 41.0 50 35.815425901278864 38.0 35.0 40.0 29.0 41.0 51 34.57170085643192 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 7.0 10 10.0 11 7.0 12 5.0 13 1.0 14 10.0 15 8.0 16 16.0 17 37.0 18 44.0 19 133.0 20 210.0 21 350.0 22 554.0 23 866.0 24 1173.0 25 1644.0 26 2195.0 27 2513.0 28 3007.0 29 3511.0 30 4210.0 31 5458.0 32 7377.0 33 10570.0 34 19800.0 35 28039.0 36 19377.0 37 29369.0 38 52610.0 39 83312.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.43563740524275 22.727272727272727 26.582663040333316 12.254426827151207 2 30.223945373531624 24.68787975232915 27.151929865169837 17.936245008969387 3 31.25614837104334 24.007580579827557 28.32626873444824 16.410002314680863 4 28.04778369307332 26.519370985475376 27.49153694809328 17.941308373358023 5 22.822029975117182 31.84169029570048 26.57181297378624 18.7644667553961 6 24.282810601238356 33.38710144088884 26.04703142179272 16.28305653608009 7 78.1736444650194 5.864822637578844 10.393640414327875 5.567892483073896 8 78.10926740350675 5.117976390255194 9.616775649557317 7.155980556680748 9 71.83395058156357 7.721630692668248 13.351730223945374 7.092688501822811 10 38.78645622359817 29.876019906255426 18.353249233261966 12.984274636884441 11 30.08542619061397 23.461098894739887 27.767128638388982 18.68634627625716 12 27.922646258897053 20.8089809617499 32.58925988079394 18.67911289855911 13 23.398530177651754 27.82354898443377 31.94223424570337 16.8356865922111 14 15.948874486430183 32.78890110526011 30.814188993692493 20.44803541461721 15 14.985750245934842 26.492607487992593 41.035675018806785 17.485967247265783 16 17.505135698165617 26.93203518314912 34.79363173427464 20.769197384410624 17 17.991218679474567 24.970704820322897 29.899528383774086 27.138548116428446 18 20.326876338174873 25.001085006654705 32.85761819339159 21.814420461778834 19 20.93375672704126 26.66476187720618 29.96969214744517 22.43178924830739 20 22.479529541114516 26.787367629188125 29.88867831722701 20.844424512470344 21 21.399947919680574 28.114330767895378 30.894117817255946 19.5916034951681 22 18.897199236155316 26.56783461605231 29.68108037729298 24.853885770499392 23 17.2414790810717 27.619567733348767 28.966784329610558 26.172168855968987 24 19.49829292286326 24.876309241363348 32.29305306405879 23.3323447717146 25 17.406400092587234 27.602569295758343 30.06372605751982 24.9273045541346 26 18.555783808807362 28.405835889126784 29.895188357155256 23.143191944910598 27 19.175322608645335 31.10641745269371 29.057563219721082 20.660696718939874 28 15.46532318731555 27.209435217869338 32.60951333834847 24.71572825646664 29 18.111654418147097 26.9284184943001 31.919087437069614 23.04083965048319 30 20.147126902378336 27.743620160870318 30.39863144493953 21.710621491811814 31 22.425279208379145 29.098793472599965 25.09548058561426 23.380446733406632 32 22.993822695445864 31.812033447138475 24.85786412823332 20.336279729182337 33 23.840127886117703 27.747236849719343 27.205095191250507 21.207540072912447 34 21.5048318963023 26.79243099357676 28.289740177073085 23.412996933047854 35 19.490697876280308 28.89155720155084 27.520470458885484 24.097274463283373 36 24.898009374457498 26.721543892135873 28.61668884902494 19.76375788438169 37 21.1565447601412 28.530973323303048 29.731352352294426 20.581129564261328 38 18.689962965106186 31.20551472715699 26.7106938255888 23.393828482148024 39 22.846985128175454 25.520441525374686 30.729920143510213 20.902653202939643 40 24.94647300503443 24.25894045483479 30.120146403564608 20.674440136566172 41 21.845162316995545 25.667279092645103 26.648848446270467 25.838710144088882 42 24.520788727504193 25.284995081303162 27.416671488918464 22.777544702274174 43 24.47485677912158 25.98844106243852 26.939630229732074 22.59707192870783 44 20.450205427926623 25.665470748220585 28.058633759620395 25.825690064232393 45 20.399210115155373 26.282477865864244 26.903463341241828 26.414848677738554 46 22.558735026908163 26.76385915166946 28.83115849777212 21.846247323650253 47 20.204993923962732 25.862941959377352 30.52955558127423 23.40250853538568 48 20.592341299693302 24.396374631097736 29.741117412186796 25.270166657022163 49 22.429619234997975 21.738108327064406 33.37733638099647 22.45493605694115 50 21.945344598113536 23.00467276199294 30.675308141889936 24.374674498003586 51 20.0552630056131 23.534879347259995 27.13312308315491 29.27673456397199 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 258.0 1 334.0 2 410.0 3 833.0 4 1256.0 5 863.0 6 470.0 7 507.5 8 545.0 9 543.5 10 542.0 11 563.5 12 585.0 13 588.5 14 592.0 15 568.0 16 544.0 17 606.5 18 669.0 19 720.0 20 771.0 21 777.0 22 783.0 23 1055.5 24 1328.0 25 1513.5 26 2264.5 27 2830.0 28 2963.0 29 3096.0 30 3639.0 31 4182.0 32 5121.5 33 6061.0 34 6216.0 35 6371.0 36 8001.5 37 9632.0 38 10191.0 39 10750.0 40 11919.0 41 13088.0 42 16711.0 43 20334.0 44 22428.5 45 24523.0 46 28263.0 47 32003.0 48 34769.5 49 37536.0 50 35041.0 51 32546.0 52 26446.0 53 20346.0 54 16490.5 55 12635.0 56 10937.0 57 9239.0 58 7968.0 59 6697.0 60 5841.5 61 4986.0 62 4236.0 63 3486.0 64 2900.5 65 2315.0 66 1861.0 67 1407.0 68 1101.0 69 795.0 70 690.0 71 585.0 72 475.0 73 365.0 74 244.0 75 83.0 76 43.0 77 38.0 78 33.0 79 18.5 80 4.0 81 4.0 82 4.0 83 15.5 84 27.0 85 13.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 276496.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.37555697008275 #Duplication Level Percentage of deduplicated Percentage of total 1 72.99717826033616 25.823158382038073 2 11.84006052427105 8.376974712111569 3 4.4830900094057995 4.757754180892309 4 2.18275876170613 3.0886522770672995 5 1.2442236126446653 2.2007551646316763 6 0.8311863575021471 1.7642208205543661 7 0.5878624299676931 1.4557172617325385 8 0.44370833844518054 1.2557143683814593 9 0.3476056107635055 1.106706787801632 >10 4.716190242506032 38.735460910826916 >50 0.2699055330634278 5.909307910421851 >100 0.050096102727681675 2.9848533071002836 >500 0.003067108330266225 0.7284011341936231 >1k 0.003067108330266225 1.8123227822463979 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 1954 0.7067010010994734 No Hit CCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 1947 0.704169318905156 No Hit CTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGCT 1110 0.40145246224176845 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 734 0.26546496151843063 No Hit TCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 718 0.2596782593599907 No Hit ACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 562 0.20325791331520168 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCC 399 0.14430588507609513 No Hit ATGAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC 385 0.1392425206874602 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 318 0.11501070539899311 No Hit GCCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTG 308 0.11139401654996818 No Hit AGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTG 305 0.11030900989526068 No Hit ACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTG 280 0.10126728777269833 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.424599270875528 0.0 2 0.0 0.0 0.0 2.42607487992593 0.0 3 0.0 0.0 0.0 3.20908801573983 0.0 4 0.0 0.0 0.0 4.183062322782247 0.0 5 0.0 0.0 0.0 6.520889994791968 0.0 6 0.0 0.0 0.0 7.774434349864013 0.0 7 0.0 0.0 0.0 9.20664313407789 0.0 8 0.0 0.0 0.0 11.322406110757479 0.0 9 0.0 0.0 0.0 12.100355882182743 0.0 10 0.0 0.0 0.0 13.722802499855332 0.0 11 0.0 0.0 0.0 16.0523117875123 0.0 12 0.0 0.0 0.0 18.14384294890342 0.0 13 0.0 0.0 0.0 19.00063653723743 0.0 14 0.0 0.0 0.0 19.44476592789769 0.0 15 0.0 0.0 0.0 19.950017360106475 0.0 16 3.6166888490249405E-4 0.0 0.0 21.043704068051618 0.0 17 3.6166888490249405E-4 0.0 0.0 22.406834095249117 0.0 18 3.6166888490249405E-4 0.0 0.0 24.194925062207048 0.0 19 3.6166888490249405E-4 0.0 0.0 25.06799375036167 0.0 20 7.233377698049881E-4 0.0 0.0 25.933467391933338 0.0 21 7.233377698049881E-4 0.0 0.0 27.017389039986114 0.0 22 7.233377698049881E-4 0.0 0.0 28.002213413575603 0.0 23 7.233377698049881E-4 0.0 0.0 28.964252647416238 0.0 24 0.0010850066547074821 0.0 0.0 29.70712053700596 0.0 25 0.0010850066547074821 0.0 0.0 30.379824662924598 0.0 26 0.0010850066547074821 0.0 0.0 31.01925525143221 0.0 27 0.0010850066547074821 0.0 0.0 31.617455587060935 0.0 28 0.0010850066547074821 0.0 0.0 32.233739366934785 0.0 29 0.0010850066547074821 0.0 0.0 32.91150685724206 0.0 30 0.0010850066547074821 0.0 0.0 33.65256640240727 0.0 31 0.0010850066547074821 0.0 0.0 34.31984549505237 0.0 32 0.0010850066547074821 0.0 0.0 34.934320930501706 0.0 33 0.0010850066547074821 0.0 0.0 35.52347954400787 0.0 34 0.0010850066547074821 0.0 0.0 36.201608703200044 0.0 35 0.0010850066547074821 0.0 0.0 36.880099531277125 0.0 36 0.0010850066547074821 0.0 0.0 37.448281349458945 0.0 37 0.0014466755396099762 0.0 0.0 38.04105665181413 0.0 38 0.0018083444245124702 0.0 0.0 38.63347028528442 0.0 39 0.0018083444245124702 0.0 0.0 39.309429431167175 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGAG 20 7.023982E-4 45.000004 1 TTAGGCG 20 7.023982E-4 45.000004 1 CCGGGTT 20 7.023982E-4 45.000004 6 GTACCCC 20 7.023982E-4 45.000004 33 ACCGGGC 25 3.883095E-5 45.000004 4 TCCGCAG 30 2.1595006E-6 45.000004 1 CAAGTCG 25 3.883095E-5 45.000004 1 GTCTGCG 20 7.023982E-4 45.000004 1 CGTGAGG 30 2.1595006E-6 45.000004 2 CGGCAGG 30 2.1595006E-6 45.000004 2 GGCCGGA 20 7.023982E-4 45.000004 27 CAACCTA 20 7.023982E-4 45.000004 37 TAAACGG 40 6.7830115E-9 45.000004 2 TCGGGCG 20 7.023982E-4 45.000004 5 GTCTATC 20 7.023982E-4 45.000004 43 GTTAGCT 20 7.023982E-4 45.000004 17 AGGAATA 20 7.023982E-4 45.000004 29 TAACGGG 30 2.1595006E-6 45.000004 3 TACGGAT 20 7.023982E-4 45.000004 4 GGCCCGA 20 7.023982E-4 45.000004 11 >>END_MODULE