##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936476.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 538876 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.9344246171661 33.0 31.0 34.0 30.0 34.0 2 31.972708007036868 33.0 31.0 34.0 30.0 34.0 3 32.000393411471286 33.0 31.0 34.0 30.0 34.0 4 35.69240047803205 37.0 35.0 37.0 33.0 37.0 5 34.76423147440227 37.0 35.0 37.0 33.0 37.0 6 35.26867034345564 37.0 35.0 37.0 33.0 37.0 7 35.85526911571493 37.0 35.0 37.0 35.0 37.0 8 35.86121668064638 37.0 35.0 37.0 35.0 37.0 9 37.70038932889941 39.0 37.0 39.0 35.0 39.0 10 37.36843541000156 39.0 37.0 39.0 34.0 39.0 11 37.26298072283791 39.0 37.0 39.0 34.0 39.0 12 37.10553819431558 39.0 37.0 39.0 34.0 39.0 13 36.98354166821309 39.0 37.0 39.0 33.0 39.0 14 37.95225246624455 40.0 37.0 41.0 33.0 41.0 15 38.10927003614932 40.0 37.0 41.0 33.0 41.0 16 38.15142073501139 40.0 37.0 41.0 34.0 41.0 17 38.15038895775652 40.0 37.0 41.0 34.0 41.0 18 38.15603775265553 40.0 37.0 41.0 34.0 41.0 19 38.10319999406171 40.0 37.0 41.0 34.0 41.0 20 38.10516890713262 40.0 36.0 41.0 34.0 41.0 21 38.03000690325789 40.0 36.0 41.0 34.0 41.0 22 38.07295927077843 40.0 36.0 41.0 34.0 41.0 23 38.075759543939604 40.0 36.0 41.0 34.0 41.0 24 38.04424208908914 40.0 36.0 41.0 34.0 41.0 25 37.91179789042377 40.0 36.0 41.0 34.0 41.0 26 37.95756166539241 40.0 36.0 41.0 34.0 41.0 27 37.95764146111536 40.0 36.0 41.0 34.0 41.0 28 37.891919476836975 40.0 36.0 41.0 34.0 41.0 29 37.88867197648439 40.0 36.0 41.0 34.0 41.0 30 37.780209176137 40.0 36.0 41.0 34.0 41.0 31 37.747082816826136 40.0 36.0 41.0 33.0 41.0 32 37.71242363734885 40.0 36.0 41.0 33.0 41.0 33 37.57944684862566 40.0 36.0 41.0 33.0 41.0 34 37.51251122707265 40.0 36.0 41.0 33.0 41.0 35 37.456579992428686 40.0 35.0 41.0 33.0 41.0 36 37.36940223724939 40.0 35.0 41.0 33.0 41.0 37 37.324599722385116 40.0 35.0 41.0 33.0 41.0 38 37.25671026358569 40.0 35.0 41.0 33.0 41.0 39 37.217651185059275 39.0 35.0 41.0 33.0 41.0 40 37.110535633429585 39.0 35.0 41.0 32.0 41.0 41 37.04160697451733 39.0 35.0 41.0 32.0 41.0 42 37.058950482114625 39.0 35.0 41.0 32.0 41.0 43 36.9482608243826 39.0 35.0 41.0 32.0 41.0 44 36.83839139245392 39.0 35.0 41.0 31.0 41.0 45 36.844708244568324 39.0 35.0 41.0 32.0 41.0 46 36.73292371528886 39.0 35.0 41.0 31.0 41.0 47 36.63794082497643 39.0 35.0 41.0 31.0 41.0 48 36.60255791684914 39.0 35.0 41.0 31.0 41.0 49 36.60632687297263 39.0 35.0 41.0 31.0 41.0 50 36.47998983068461 39.0 35.0 40.0 31.0 41.0 51 35.28062485618213 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 7.0 10 8.0 11 11.0 12 7.0 13 8.0 14 11.0 15 23.0 16 25.0 17 39.0 18 97.0 19 188.0 20 323.0 21 548.0 22 827.0 23 1179.0 24 1786.0 25 2434.0 26 3337.0 27 4049.0 28 4797.0 29 6017.0 30 7490.0 31 9761.0 32 12968.0 33 19220.0 34 35685.0 35 48168.0 36 38783.0 37 57318.0 38 103786.0 39 179871.0 40 100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.22242593843481 22.073723825147155 25.73393507968438 11.969915156733645 2 30.38899487080516 25.49900162560589 26.493293447843293 17.618710055745662 3 31.389596122299007 23.861704733556515 28.568353387421226 16.180345756723252 4 29.200780884656208 25.557085489054998 26.9837587868081 18.258374839480695 5 24.693992681062063 30.469718450998002 26.32665028689346 18.509638581046474 6 25.65395378528641 33.22118632115737 25.53036320043943 15.594496693116783 7 77.06336893830863 6.3432032601192105 11.242103934856999 5.351323866715163 8 76.81822905455059 5.59368017874242 10.376969840928155 7.211120925778844 9 70.31005277652001 7.881590570001262 13.488260750154025 8.320095903324699 10 40.14504264431892 25.483228052464764 19.631417988553952 14.740311314662371 11 29.703679510685205 24.472605942740074 26.5320778806256 19.291636665949124 12 26.20677113102087 21.67641535343938 32.09383977018832 20.022973745351436 13 23.1400173694876 25.87738180954431 32.89383828561673 18.08876253535136 14 18.965958773446953 29.44258048233731 30.79391177191042 20.797548972305314 15 16.722956672778153 25.472093765541608 39.133121534453196 18.671828027227043 16 19.329864384385274 26.031962826327394 32.39131080248517 22.24686198680216 17 19.57741669697667 25.735048508376696 29.466704770670805 25.220830023975832 18 20.19945219308338 25.477660909003184 32.89810642893727 21.424780468976167 19 21.82078994054291 26.799115195332508 29.538892064222566 21.841202799902018 20 21.87757480385098 27.91978117414767 30.38880929935644 19.813834722644913 21 21.741550931939816 27.406490546990405 31.088784803925208 19.763173717144575 22 19.210913085756278 25.525723914221455 29.33643361366994 25.92692938635233 23 18.90991619593376 26.43372501280443 30.000408257187182 24.65595053407463 24 21.376531892309178 24.165299623661102 30.87834678107765 23.57982170295207 25 18.498689865572043 27.782829444992913 29.316763040105702 24.401717649329342 26 18.329263132891427 27.302941678605098 30.90154321216755 23.46625197633593 27 21.21378573178245 26.871488060332986 29.54575820782518 22.368968000059382 28 16.762854534252778 25.309718747912317 32.205182639419824 25.722244078415073 29 18.170970687133963 23.640132423785808 32.392609802626204 25.79628708645403 30 22.146282261596358 24.376294360854818 30.683682331371227 22.793741046177598 31 20.989986564627113 25.347018609104875 28.588580675331617 25.07441415093639 32 22.79077190299809 24.707910539716003 28.19108663217512 24.310230925110787 33 22.07724968267282 22.729904467818198 31.191776957964358 24.001068891544623 34 18.867605905625783 22.712275180189874 32.88938457084747 25.53073434333687 35 20.982006992332188 21.878131518197137 31.6738915817368 25.465969907733875 36 22.646211744445846 21.762334934196364 33.8743978206489 21.71705550070888 37 20.581358234547466 23.213318091731676 33.17145317290063 23.033870500820225 38 20.129677328364966 24.825933981101404 29.046199867873128 25.998188822660502 39 19.787854719824228 21.96664909923619 34.367832302793225 23.877663878146365 40 22.537095732598967 20.974769705832138 34.37024473162657 22.117889829942325 41 20.784930113792413 22.239067985955952 31.176560099169382 25.799441801082253 42 22.533013160727144 21.032296854935087 32.02183804808527 24.412851936252498 43 23.227607093283055 20.578389091367956 31.00212293737335 25.191880877975635 44 19.383865675962557 22.053310965788047 30.949791788834535 27.613031569414858 45 20.40692107275143 21.331066887372977 30.324044863753443 27.937967176122154 46 23.700072001722102 21.333479316206326 31.660530437429017 23.30591824464255 47 19.315946525731338 20.79439425767709 35.849434749367205 24.040224467224373 48 20.209844194211655 20.60139995100914 33.020583585091934 26.168172269687272 49 21.75194293306809 18.436894573148553 35.50260171171104 24.308560782072313 50 20.517336084739345 19.179737082371453 33.58305064615978 26.71987618672941 51 19.02144463661399 19.901610017889087 30.263734142919706 30.813211202577218 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 365.0 1 462.5 2 560.0 3 1276.5 4 1993.0 5 1352.0 6 711.0 7 769.0 8 827.0 9 887.5 10 948.0 11 975.0 12 1002.0 13 1091.5 14 1181.0 15 1146.0 16 1111.0 17 1156.5 18 1202.0 19 1273.5 20 1345.0 21 1469.5 22 1594.0 23 1897.0 24 2200.0 25 2525.0 26 3717.5 27 4585.0 28 5109.5 29 5634.0 30 6877.0 31 8120.0 32 9156.0 33 10192.0 34 11771.0 35 13350.0 36 14437.5 37 15525.0 38 17079.0 39 18633.0 40 21060.5 41 23488.0 42 28143.5 43 32799.0 44 37894.0 45 42989.0 46 52890.5 47 62792.0 48 67461.0 49 72130.0 50 69497.5 51 66865.0 52 54104.5 53 41344.0 54 34633.5 55 27923.0 56 24576.0 57 21229.0 58 17965.5 59 14702.0 60 13408.0 61 12114.0 62 10567.5 63 9021.0 64 7667.5 65 6314.0 66 5185.0 67 4056.0 68 3463.0 69 2870.0 70 2317.5 71 1765.0 72 1406.0 73 1047.0 74 835.5 75 460.0 76 296.0 77 350.5 78 405.0 79 225.0 80 45.0 81 60.5 82 76.0 83 56.0 84 36.0 85 22.5 86 9.0 87 6.5 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 2.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 538876.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.145234938619616 #Duplication Level Percentage of deduplicated Percentage of total 1 69.5576143175415 22.359458540072634 2 13.039622933574504 8.383234854215296 3 5.114012590889261 4.9317340863958234 4 2.565190435616512 3.2983459686077112 5 1.5541130008097863 2.497866376609686 6 0.987836700623173 1.9052545693513647 7 0.7208535743827493 1.622040525341403 8 0.5215740857758315 1.3412897220127877 9 0.4058330363887484 1.1741038470512712 >10 5.148682584150867 38.842612132861575 >50 0.3156239919976113 6.174768209052096 >100 0.06092007198483292 3.630483205189315 >500 0.0029009558088015676 0.559511436122878 >1k 0.005221720455842822 3.2792965271161885 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 3748 0.6955217897995086 No Hit CCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 3238 0.6008803509527239 No Hit CTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGCT 2467 0.4578047639902315 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 1561 0.28967703145064916 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGC 1540 0.28578003102754623 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTC 1413 0.2622124570402096 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCG 1406 0.26091345689917533 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1135 0.21062359429627597 No Hit ACTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 1075 0.19948930737312479 No Hit ACCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTG 676 0.12544629933416965 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCC 618 0.11468315530845687 No Hit CGCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTG 583 0.10818815460328535 No Hit GCCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTG 573 0.1063324401160935 No Hit AGCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTG 550 0.10206429679555222 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.48452705260579426 0.0 2 0.0 0.0 0.0 2.3756856865030174 0.0 3 0.0 0.0 0.0 3.1903443463802432 0.0 4 0.0 0.0 0.0 4.195213741194634 0.0 5 0.0 0.0 0.0 6.856679458725198 0.0 6 0.0 0.0 0.0 8.138978169374772 0.0 7 0.0 0.0 0.0 9.58921904111521 0.0 8 0.0 0.0 0.0 11.706403699552402 0.0 9 0.0 0.0 0.0 12.48636049851914 0.0 10 0.0 0.0 0.0 14.39384941990365 0.0 11 0.0 0.0 0.0 16.80553596745819 0.0 12 0.0 0.0 0.0 18.890802336715684 0.0 13 0.0 0.0 0.0 19.63420156028474 0.0 14 0.0 0.0 0.0 19.921837305799478 0.0 15 0.0 0.0 0.0 20.505459512021318 0.0 16 0.0 0.0 0.0 21.702580927708787 0.0 17 0.0 0.0 0.0 23.13352236878243 0.0 18 0.0 0.0 0.0 24.75615911638299 0.0 19 0.0 0.0 0.0 25.72094507827404 0.0 20 0.0 0.0 0.0 26.60426517417736 0.0 21 0.0 0.0 0.0 27.65942443159465 0.0 22 0.0 0.0 0.0 28.777863553025185 0.0 23 0.0 0.0 0.0 29.860116241955478 0.0 24 0.0 0.0 0.0 30.69574447553797 0.0 25 0.0 0.0 0.0 31.464752559030277 0.0 26 0.0 0.0 0.0 32.1255724879193 0.0 27 0.0 0.0 0.0 32.862476710783184 0.0 28 0.0 0.0 0.0 33.51346135289009 0.0 29 0.0 0.0 0.0 34.19283842665103 0.0 30 0.0 0.0 0.0 35.027909945887366 0.0 31 0.0 0.0 0.0 35.76370074005894 0.0 32 0.0 0.0 0.0 36.444376813960915 0.0 33 0.0 0.0 0.0 37.08478388349082 0.0 34 0.0 0.0 0.0 37.70385023641803 0.0 35 0.0 0.0 0.0 38.43203260119211 0.0 36 0.0 0.0 0.0 39.055923811786016 0.0 37 0.0 0.0 0.0 39.67684587920041 0.0 38 0.0 0.0 0.0 40.30073708979431 0.0 39 0.0 0.0 0.0 41.01407373867087 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTCC 30 2.1633477E-6 45.000004 21 AGATCGT 25 3.888037E-5 45.000004 23 TAGACGG 60 0.0 45.000004 2 TTGTCGC 30 2.1633477E-6 45.000004 38 AGGCGAT 25 3.888037E-5 45.000004 6 CGTTCCA 25 3.888037E-5 45.000004 14 CGTTAGG 55 1.8189894E-12 45.000004 2 CTACGAA 30 2.1633477E-6 45.000004 11 TGCGACG 25 3.888037E-5 45.000004 1 ATAAGCG 25 3.888037E-5 45.000004 1 CGAATAT 30 2.1633477E-6 45.000004 14 GATTCGA 25 3.888037E-5 45.000004 22 CCACGAC 30 2.1633477E-6 45.000004 11 CGATAGT 25 3.888037E-5 45.000004 10 GCGTAAG 60 0.0 45.000004 1 AATCGCG 30 2.1633477E-6 45.000004 1 GACTACG 25 3.888037E-5 45.000004 1 TGTCCGA 25 3.888037E-5 45.000004 4 CGTATGG 45 3.8380676E-10 45.0 2 CGAGTAT 20 7.029949E-4 45.0 43 >>END_MODULE