##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936473.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 643335 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.897945860243887 33.0 31.0 34.0 30.0 34.0 2 31.94218564200611 33.0 31.0 34.0 30.0 34.0 3 31.98600107253608 33.0 31.0 34.0 30.0 34.0 4 35.65600348185627 37.0 35.0 37.0 33.0 37.0 5 34.736264931956136 37.0 35.0 37.0 33.0 37.0 6 35.24804806205165 37.0 35.0 37.0 33.0 37.0 7 35.844120092953126 37.0 35.0 37.0 35.0 37.0 8 35.83863772373647 37.0 35.0 37.0 35.0 37.0 9 37.69119199173059 39.0 37.0 39.0 35.0 39.0 10 37.322494501309585 39.0 37.0 39.0 34.0 39.0 11 37.246863609161636 39.0 37.0 39.0 34.0 39.0 12 37.13220483884757 39.0 37.0 39.0 34.0 39.0 13 36.994973070017956 39.0 37.0 39.0 33.0 39.0 14 37.99840829427903 40.0 37.0 41.0 33.0 41.0 15 38.1361157095448 40.0 37.0 41.0 33.0 41.0 16 38.191261162535845 40.0 37.0 41.0 34.0 41.0 17 38.18744355584571 40.0 37.0 41.0 34.0 41.0 18 38.19973264317968 40.0 37.0 41.0 34.0 41.0 19 38.13807736249388 40.0 37.0 41.0 34.0 41.0 20 38.1108986764283 40.0 37.0 41.0 34.0 41.0 21 38.03310405931591 40.0 36.0 41.0 34.0 41.0 22 38.10492356237419 40.0 37.0 41.0 34.0 41.0 23 38.12411418623268 40.0 37.0 41.0 34.0 41.0 24 38.10425827912363 40.0 36.0 41.0 34.0 41.0 25 37.97077572337896 40.0 36.0 41.0 34.0 41.0 26 38.001653881725694 40.0 36.0 41.0 34.0 41.0 27 38.04625272991521 40.0 36.0 41.0 34.0 41.0 28 37.94877318970676 40.0 36.0 41.0 34.0 41.0 29 37.91570954479393 40.0 36.0 41.0 34.0 41.0 30 37.82735588767905 40.0 36.0 41.0 34.0 41.0 31 37.77421716524051 40.0 36.0 41.0 33.0 41.0 32 37.69933083074914 40.0 36.0 41.0 33.0 41.0 33 37.58455237162598 40.0 36.0 41.0 33.0 41.0 34 37.50964116673273 40.0 36.0 41.0 33.0 41.0 35 37.47047650135622 40.0 36.0 41.0 33.0 41.0 36 37.427960549325 40.0 36.0 41.0 33.0 41.0 37 37.35780114559289 40.0 35.0 41.0 33.0 41.0 38 37.26801899476944 40.0 35.0 41.0 33.0 41.0 39 37.236704049989505 40.0 35.0 41.0 33.0 41.0 40 37.12228310289352 39.0 35.0 41.0 32.0 41.0 41 37.044236672961986 39.0 35.0 41.0 32.0 41.0 42 37.103512167066924 39.0 35.0 41.0 32.0 41.0 43 37.00383936829179 39.0 35.0 41.0 32.0 41.0 44 36.87213970948262 39.0 35.0 41.0 31.0 41.0 45 36.854245455322655 39.0 35.0 41.0 31.0 41.0 46 36.72522402791703 39.0 35.0 41.0 31.0 41.0 47 36.61933362866935 39.0 35.0 41.0 31.0 41.0 48 36.58939899119432 39.0 35.0 41.0 31.0 41.0 49 36.61809788057544 39.0 35.0 41.0 31.0 41.0 50 36.50809298421507 39.0 35.0 41.0 31.0 41.0 51 35.255980165854496 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 3.0 10 4.0 11 7.0 12 8.0 13 11.0 14 9.0 15 13.0 16 30.0 17 60.0 18 100.0 19 219.0 20 393.0 21 753.0 22 1106.0 23 1584.0 24 2430.0 25 3306.0 26 4114.0 27 4779.0 28 5653.0 29 6869.0 30 8746.0 31 11466.0 32 15416.0 33 22719.0 34 40081.0 35 53322.0 36 46923.0 37 70947.0 38 129140.0 39 212995.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.521866523661856 22.43543410509299 26.36418040367771 11.678518967567442 2 29.42619319639068 27.12583646156357 25.989880855230947 17.458089486814803 3 29.373499032385926 26.472366651899865 27.65852938204823 16.495604933665973 4 27.5910684169212 24.66149051427328 30.03147660239222 17.7159644664133 5 24.312216807728475 29.57432752764889 26.775474674936074 19.337980989686553 6 24.163927036458453 33.69333240069326 26.290968158113582 15.851772404734701 7 76.08726402263206 5.56366434283849 12.183699005961124 6.16537262856832 8 75.83063256312808 6.150605827446043 10.660076010165778 7.358685599260105 9 69.9536011564737 7.010033652762558 13.475094624107193 9.561270566656562 10 38.71249038214927 26.043973979342024 20.504091958310987 14.73944368019772 11 28.165885580607302 24.80480620516527 27.508685210660076 19.520623003567348 12 24.91858829381271 21.199219691140698 33.40094973847218 20.481242276574413 13 21.785850295724625 25.885425167292315 34.26535164416673 18.06337289281634 14 17.643373980896424 29.933549394949754 31.002199476167156 21.420877147986666 15 15.902601288597698 25.59024458485859 38.998500003886 19.508654122657713 16 17.64912526133352 27.829668835054832 31.81359633783332 22.707609565778327 17 18.301506990914532 26.436304569159148 29.387177753425508 25.87501068650081 18 20.00139896010632 25.80972588153917 32.698205445063614 21.490669713290895 19 20.424972992297945 27.723503306986252 29.232514941671134 22.619008759044664 20 21.178546169569508 28.19324302268647 30.285931901730823 20.3422789060132 21 20.210621216007212 29.03308540651449 31.259297255706592 19.496996121771705 22 18.346740034352244 25.997963735845243 29.41655591565825 26.238740314144266 23 17.178608345574233 27.00381605229002 30.45613871466654 25.361436887469203 24 20.64958380936837 24.72211211888052 30.478211196344052 24.150092875407058 25 17.715653586389674 27.90754428097337 29.115624052787425 25.261178079849532 26 16.915759285597705 26.89625156411512 32.05639363628592 24.13159551400126 27 19.571141007406716 26.81542275797213 31.75701617353323 21.856420061087924 28 17.363581959632228 25.37620368859148 33.68664848018528 23.573565871591008 29 17.646171901109064 22.661599322281546 35.98545081489426 23.706777961715126 30 20.498806997909334 24.33941880979583 34.90996137315707 20.251812819137776 31 24.104393511933907 25.270504480558344 28.583552892350017 22.041549115157732 32 21.29434897837052 24.868225729985156 31.085981642534605 22.751443649109717 33 20.373366908375885 23.313670171838933 31.517793995352346 24.79516892443284 34 22.045435115453067 21.796420216527938 32.582091756238974 23.57605291178002 35 17.700109585208327 21.840720619894768 33.40374765868482 27.05542213621208 36 21.905383664809158 21.381706265009676 33.748824484910664 22.964085585270507 37 21.323571700591447 22.494190429558472 35.08187802622273 21.10035984362735 38 19.912487273349033 23.625793715560324 30.654635609752308 25.80708340133834 39 21.74870013290121 21.42756106849464 33.18846324232321 23.635275556280945 40 22.61279115857213 20.147978891246396 33.61219271452664 23.62703723565483 41 19.66129621425851 22.373724420403057 28.506454646490553 29.45852471884788 42 20.769583498488345 19.858860469273395 31.848104020455903 27.52345201178235 43 22.131393441985903 20.365284027761586 31.942300667614848 25.561021862637663 44 20.2521236991614 21.93662710718366 32.07038323734913 25.740865956305814 45 20.492123077401352 20.84015326385165 31.33033334110533 27.337390317641663 46 24.279263525224028 21.42880458858915 31.56053999860104 22.731391887585783 47 18.383112997116587 21.215385452369297 35.81213520172227 24.58936634879184 48 19.31699658809174 20.73958357620835 32.42245486410657 27.520964971593337 49 21.36149906347393 17.956741044712317 35.646125269105525 25.03563462270823 50 20.909168629096815 18.557827570394895 33.6578920779998 26.875111722508493 51 19.240675542291342 18.277724669107076 29.973652917997622 32.50794687060396 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 411.0 1 492.0 2 573.0 3 1398.5 4 2224.0 5 1596.0 6 968.0 7 1018.0 8 1068.0 9 1162.5 10 1257.0 11 1312.0 12 1367.0 13 1363.5 14 1360.0 15 1325.5 16 1291.0 17 1814.5 18 2338.0 19 1952.5 20 1567.0 21 2012.0 22 2457.0 23 2535.5 24 2614.0 25 2931.0 26 3985.0 27 4722.0 28 5747.0 29 6772.0 30 7634.0 31 8496.0 32 10616.0 33 12736.0 34 14181.0 35 15626.0 36 17777.5 37 19929.0 38 21586.0 39 23243.0 40 26967.0 41 30691.0 42 35177.5 43 39664.0 44 46084.5 45 52505.0 46 69890.0 47 87275.0 48 89383.5 49 91492.0 50 86181.0 51 80870.0 52 63904.0 53 46938.0 54 37611.0 55 28284.0 56 24027.5 57 19771.0 58 17506.5 59 15242.0 60 13387.0 61 11532.0 62 9987.0 63 8442.0 64 7226.5 65 6011.0 66 4880.0 67 3749.0 68 3232.5 69 2716.0 70 2186.5 71 1657.0 72 1297.0 73 937.0 74 794.5 75 495.0 76 338.0 77 242.5 78 147.0 79 121.0 80 95.0 81 54.5 82 14.0 83 15.5 84 17.0 85 18.5 86 20.0 87 12.5 88 5.0 89 3.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 643335.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.12626391878961 #Duplication Level Percentage of deduplicated Percentage of total 1 69.09140062159128 22.196485708880655 2 13.192786636494336 8.476698906165955 3 5.34481007045934 5.151263367581437 4 2.7884222218233035 3.5832635286125263 5 1.6178154546593844 2.5987183134142 6 1.0455700625585553 2.015415586520491 7 0.772358105039762 1.7369086225626538 8 0.5616254238732618 1.4434341272683593 9 0.4350434855928244 1.2578689650874701 >10 4.739092207805995 35.03780342992124 >50 0.337305334736618 6.638245118344079 >100 0.0616370899433638 3.791010964286156 >500 0.007765302670030085 1.6804933854189432 >1k 0.004367982751891922 4.392389975935893 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 4898 0.7613451778622335 TruSeq Adapter, Index 21 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 4573 0.7108271740228652 TruSeq Adapter, Index 21 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGC 3930 0.6108792464268227 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTC 3504 0.544661801394297 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCG 3497 0.5435737213116028 No Hit CTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGCT 3203 0.4978743578384512 TruSeq Adapter, Index 14 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 2011 0.3125898637568297 TruSeq Adapter, Index 21 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 1406 0.2185486566096979 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1149 0.1786005735736436 No Hit ACCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTG 910 0.1414504107502312 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTG 871 0.13538825028950702 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCC 808 0.12559552954526024 No Hit TGTTTTCTAATTGGTTATAACATTTTTTCAATTAATAGTTTCAAAACAAAT 806 0.12528464952163337 No Hit AGCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTG 762 0.11844528900184195 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCT 739 0.11487016873013282 No Hit GCCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTG 697 0.10834168823396831 No Hit GAACTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCT 659 0.10243496778505755 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.108800236268818E-4 0.0 0.0 0.523211079764042 0.0 2 3.108800236268818E-4 0.0 0.0 2.6306667599306737 0.0 3 3.108800236268818E-4 0.0 0.0 3.568591791212976 0.0 4 3.108800236268818E-4 0.0 0.0 4.793148204279263 0.0 5 3.108800236268818E-4 0.0 0.0 7.953243644446517 0.0 6 3.108800236268818E-4 0.0 0.0 9.479042800407253 0.0 7 3.108800236268818E-4 0.0 0.0 11.12048932515719 0.0 8 3.108800236268818E-4 0.0 0.0 13.58887671275463 0.0 9 3.108800236268818E-4 0.0 0.0 14.452501418390108 0.0 10 4.663200354403227E-4 0.0 0.0 16.883738643164136 0.0 11 4.663200354403227E-4 0.0 0.0 19.53150380439429 0.0 12 4.663200354403227E-4 0.0 0.0 22.20864712785718 0.0 13 4.663200354403227E-4 0.0 0.0 23.128074797733685 0.0 14 4.663200354403227E-4 0.0 0.0 23.495379545648845 0.0 15 4.663200354403227E-4 0.0 0.0 24.129730233859497 0.0 16 4.663200354403227E-4 0.0 0.0 25.381333208981324 0.0 17 4.663200354403227E-4 0.0 0.0 26.91117380524921 0.0 18 9.326400708806454E-4 0.0 0.0 28.694070740749375 0.0 19 9.326400708806454E-4 0.0 0.0 29.805311385203666 0.0 20 9.326400708806454E-4 0.0 0.0 30.875982186574646 0.0 21 9.326400708806454E-4 0.0 0.0 32.03121235437214 0.0 22 9.326400708806454E-4 0.0 0.0 33.245043406623296 0.0 23 9.326400708806454E-4 0.0 0.0 34.378667412778725 0.0 24 0.0010880800826940863 0.0 0.0 35.2665407602571 0.0 25 0.0010880800826940863 0.0 0.0 36.01964761749322 0.0 26 0.0010880800826940863 0.0 0.0 36.7433763124966 0.0 27 0.0010880800826940863 0.0 0.0 37.48824484910661 0.0 28 0.0012435200945075271 0.0 0.0 38.24896826692159 0.0 29 0.0012435200945075271 0.0 0.0 39.05026152781988 0.0 30 0.0012435200945075271 0.0 0.0 39.92212455408146 0.0 31 0.0013989601063209682 0.0 0.0 40.678029331530226 0.0 32 0.0013989601063209682 0.0 0.0 41.38885650555309 0.0 33 0.0013989601063209682 0.0 0.0 42.07030551734322 0.0 34 0.001554400118134409 0.0 0.0 42.760925489830335 0.0 35 0.001554400118134409 0.0 0.0 43.48667490498729 0.0 36 0.001554400118134409 0.0 0.0 44.15739855596229 0.0 37 0.0017098401299478498 0.0 0.0 44.79408084435014 0.0 38 0.0017098401299478498 0.0 0.0 45.462628335159756 0.0 39 0.0017098401299478498 0.0 0.0 46.21868855262033 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTACG 35 1.2108103E-7 45.000004 1 AGTACGG 60 0.0 45.000004 2 TCCGGCC 20 7.0309686E-4 45.0 41 CTATGCG 20 7.0309686E-4 45.0 1 TAATACG 25 3.8888837E-5 45.0 4 GGTACCG 20 7.0309686E-4 45.0 9 ACACGAC 20 7.0309686E-4 45.0 26 GATCGCG 25 3.8888837E-5 45.0 1 GGTCGAC 20 7.0309686E-4 45.0 8 GACGTAC 20 7.0309686E-4 45.0 10 CGTCTAG 20 7.0309686E-4 45.0 23 TCTAGCG 20 7.0309686E-4 45.0 1 GTCAGGT 20 7.0309686E-4 45.0 3 CTAACGG 20 7.0309686E-4 45.0 2 CCCCCTA 20 7.0309686E-4 45.0 21 TTGCGGT 20 7.0309686E-4 45.0 3 TACTACG 80 0.0 45.0 1 CCGGTCG 20 7.0309686E-4 45.0 23 TATCGCG 20 7.0309686E-4 45.0 1 AGTACGT 20 7.0309686E-4 45.0 19 >>END_MODULE