##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936467.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1330449 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.027957479016486 33.0 31.0 34.0 30.0 34.0 2 32.05160889293765 33.0 31.0 34.0 30.0 34.0 3 32.099099627268686 33.0 31.0 34.0 30.0 34.0 4 35.77656114589887 37.0 35.0 37.0 35.0 37.0 5 34.84245243523051 37.0 35.0 37.0 33.0 37.0 6 35.314916994187676 37.0 35.0 37.0 33.0 37.0 7 35.87581861461807 37.0 35.0 37.0 35.0 37.0 8 35.84233893971133 37.0 35.0 37.0 35.0 37.0 9 37.710572896819045 39.0 38.0 39.0 35.0 39.0 10 37.38040766688539 39.0 37.0 39.0 34.0 39.0 11 37.296732907462065 39.0 37.0 39.0 34.0 39.0 12 37.18918650771281 39.0 37.0 39.0 34.0 39.0 13 37.08574173079915 39.0 37.0 39.0 33.0 39.0 14 38.091200790109205 40.0 37.0 41.0 33.0 41.0 15 38.20824398379795 40.0 37.0 41.0 33.0 41.0 16 38.26049251042317 40.0 37.0 41.0 34.0 41.0 17 38.24478277634092 40.0 37.0 41.0 34.0 41.0 18 38.23089047381749 40.0 37.0 41.0 34.0 41.0 19 38.18504129057183 40.0 37.0 41.0 34.0 41.0 20 38.17704774854203 40.0 37.0 41.0 34.0 41.0 21 38.10067954502578 40.0 37.0 41.0 34.0 41.0 22 38.167979381396805 40.0 37.0 41.0 34.0 41.0 23 38.17716049243526 40.0 37.0 41.0 34.0 41.0 24 38.12653021649082 40.0 37.0 41.0 34.0 41.0 25 37.97438759396264 40.0 36.0 41.0 34.0 41.0 26 37.971072923501765 40.0 36.0 41.0 34.0 41.0 27 37.93993756994819 40.0 36.0 41.0 34.0 41.0 28 37.78891637334464 40.0 36.0 41.0 33.0 41.0 29 37.72052442446122 40.0 36.0 41.0 33.0 41.0 30 37.56068966191113 40.0 36.0 41.0 33.0 41.0 31 37.44379153203167 40.0 36.0 41.0 33.0 41.0 32 37.4042296998983 39.0 35.0 41.0 33.0 41.0 33 37.26386280120471 39.0 35.0 41.0 32.0 41.0 34 37.122072322952626 39.0 35.0 41.0 32.0 41.0 35 37.08182275307058 39.0 35.0 41.0 32.0 41.0 36 37.00225337461263 39.0 35.0 41.0 31.0 41.0 37 36.94644965722098 39.0 35.0 41.0 31.0 41.0 38 36.89163207308209 39.0 35.0 41.0 31.0 41.0 39 36.87685285193194 39.0 35.0 41.0 31.0 41.0 40 36.7819239970867 39.0 35.0 41.0 31.0 41.0 41 36.68144513619087 39.0 35.0 41.0 31.0 41.0 42 36.692839785666344 39.0 35.0 41.0 31.0 41.0 43 36.60354737385649 39.0 35.0 41.0 31.0 41.0 44 36.461348762710934 39.0 35.0 41.0 31.0 41.0 45 36.43381219422917 39.0 35.0 41.0 31.0 41.0 46 36.2930469337795 39.0 35.0 40.0 30.0 41.0 47 36.169384170306415 38.0 35.0 40.0 30.0 41.0 48 36.14565984866763 38.0 35.0 40.0 30.0 41.0 49 36.16263156272807 38.0 35.0 40.0 30.0 41.0 50 36.05815179687459 38.0 35.0 40.0 30.0 41.0 51 34.906632272262975 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 8.0 9 20.0 10 37.0 11 29.0 12 18.0 13 40.0 14 37.0 15 56.0 16 73.0 17 146.0 18 274.0 19 522.0 20 898.0 21 1601.0 22 2420.0 23 3714.0 24 5356.0 25 7396.0 26 9592.0 27 11231.0 28 13240.0 29 16303.0 30 19856.0 31 25812.0 32 35051.0 33 49105.0 34 86797.0 35 102551.0 36 102121.0 37 157005.0 38 273987.0 39 404882.0 40 268.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.26362679065488 21.554753320119747 24.270678545363257 11.91094134386211 2 30.80997467772158 26.40875373652053 24.430474223363692 18.3507973623942 3 30.169739689383057 25.97446425981003 26.82921329566184 17.026582755145068 4 27.928466254625317 24.562459741034793 28.32231825496505 19.186755749374836 5 25.749502611524377 30.412514872798578 24.711732655667372 19.12624986000967 6 25.448626741799195 34.03580295073317 25.030873036095336 15.484697271372298 7 77.81831547094251 5.658540838468817 11.089714825596472 5.4334288649921945 8 77.63942849368898 6.607919582035839 9.714389653417756 6.038262270857432 9 71.93165615517769 6.641517262217492 11.71702184751163 9.70980473509319 10 40.26324947442555 24.928802231427134 19.08919470043572 15.718753593711595 11 29.693885297369533 23.665469326520597 25.919445239915245 20.72120013619462 12 26.758635618501724 21.032824257074115 30.514660840062263 21.6938792843619 13 24.623642093759322 22.69624765774562 32.64822627549046 20.031883973004604 14 20.21422842965044 26.218817857730738 30.878823615185553 22.688130097433273 15 18.50653426023846 24.63829879987884 35.60602473300367 21.249142206879032 16 21.88757329292592 25.614134777056467 29.729512367629273 22.768779562388335 17 22.27345805814428 24.70639611138796 29.100702093804422 23.919443736663336 18 22.80448179524356 24.67926241441799 30.48474612705936 22.03150966327909 19 22.890091991500615 26.825906141460514 27.265306674663968 23.018695192374906 20 23.6423944097068 27.71162216665201 28.788626997352022 19.85735642628917 21 22.73465574403829 27.42036710914887 29.974993404482248 19.869983742330596 22 21.698539365281945 23.69718794181513 29.06620246247695 25.53807023042597 23 21.10475486095296 26.452874180070037 29.12580640069631 23.3165645582807 24 22.56448762786097 24.688131600685182 28.6999351346801 24.04744563677375 25 21.8268419157743 27.55671205735808 26.34824784715536 24.268198179712265 26 21.03560527310705 26.710982532964433 27.112651443234576 25.140760750693943 27 21.8965176417886 27.066426447011498 27.551901651247064 23.485154259952843 28 18.689254529861724 27.545888643608286 28.627628717823832 25.13722810870616 29 21.262370823684336 27.280865331929295 27.60481611846828 23.851947725918095 30 21.49311999182231 28.507518890239307 27.224794035697723 22.774567082240658 31 21.4936461299907 28.901070240197107 24.83529996264419 24.769983667168002 32 22.818687525790164 27.88066284389706 25.520031207509646 23.78061842280313 33 21.70019294238261 26.256323992877594 24.077134861990203 27.966348202749597 34 19.532052713031465 26.77464525133996 27.17789257611528 26.51540945951329 35 18.90061174836465 27.642923554379013 26.178831356932886 27.277633340323455 36 20.831839476748076 29.27613159166567 23.709890420452044 26.182138511134212 37 19.384207887713096 28.175901518960895 27.415406377846878 25.024484215479138 38 19.77452724606505 26.829513946043782 25.558288968611347 27.837669839279823 39 20.776294318684897 23.3312964269957 26.98712990877516 28.905279345544248 40 22.07938823660283 22.620258273710604 27.824065409497095 27.47628808018947 41 19.486579342763232 24.97818405666057 25.143165953749445 30.392070646826745 42 20.311113015230198 24.28338102400017 28.319612401527607 27.08589355924203 43 21.183224610638966 24.025798809274164 27.834437847673982 26.956538732412895 44 20.9009139019985 24.07826230092247 27.682910055176862 27.33791374190217 45 20.72826542017018 23.082207585559463 27.406161378602263 28.783365615668092 46 22.10795002288701 24.593952868542875 26.87528796669395 26.422809141876165 47 18.462338654093468 24.569449862414867 30.698132735640378 26.27007874785129 48 19.612927665772983 24.48023186157455 28.16785912124403 27.73898135140843 49 21.065294498323496 22.220618753518547 30.153955544331275 26.560131203826675 50 20.036619216520137 22.632660101965577 29.162711235079286 28.168009446435 51 19.465684141218492 22.708423998214137 26.772240048284452 31.053651812282922 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 387.0 1 841.0 2 1295.0 3 3437.5 4 5580.0 5 3831.5 6 2083.0 7 2110.0 8 2137.0 9 2200.0 10 2263.0 11 2381.0 12 2499.0 13 2547.0 14 2595.0 15 2643.0 16 2691.0 17 2648.0 18 2605.0 19 2750.0 20 2895.0 21 3039.5 22 3184.0 23 3395.5 24 3607.0 25 5000.0 26 7854.5 27 9316.0 28 10304.5 29 11293.0 30 13331.5 31 15370.0 32 18689.0 33 22008.0 34 26655.5 35 31303.0 36 33952.5 37 36602.0 38 40668.5 39 44735.0 40 50264.5 41 55794.0 42 61378.5 43 66963.0 44 77893.5 45 88824.0 46 116413.5 47 144003.0 48 146969.5 49 149936.0 50 147794.5 51 145653.0 52 122156.0 53 98659.0 54 87528.5 55 76398.0 56 68081.5 57 59765.0 58 57257.0 59 54749.0 60 50947.5 61 47146.0 62 42307.5 63 37469.0 64 33387.0 65 29305.0 66 25129.5 67 20954.0 68 18479.5 69 16005.0 70 13396.0 71 10787.0 72 9127.0 73 7467.0 74 5991.5 75 3520.0 76 2524.0 77 1851.0 78 1178.0 79 930.0 80 682.0 81 613.0 82 544.0 83 361.5 84 179.0 85 109.0 86 39.0 87 37.0 88 35.0 89 27.0 90 19.0 91 13.5 92 8.0 93 6.5 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1330449.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.08532026848577 #Duplication Level Percentage of deduplicated Percentage of total 1 71.20559076033602 20.710374121711045 2 11.446668233877508 6.658600231788594 3 4.405026953711891 3.843648592200678 4 2.254207694740928 2.622574110128996 5 1.367238037962152 1.988327810869265 6 0.8818515162803267 1.5389360268157857 7 0.6991507352027537 1.4234516134523567 8 0.5637581932319611 1.311767008330758 9 0.43848062956644823 1.1478014588220677 >10 6.221258737159544 43.13500554676038 >50 0.4531620542500726 7.934004602990734 >100 0.05572135613704616 2.9609398820554 >500 0.004205385356434939 0.9359389371613699 >1k 0.002628365847771837 1.519152050908335 >5k 0.0010513463391087347 2.269478006004214 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTC 9458 0.7108878280941245 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGC 7528 0.5658240188086878 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCG 6801 0.5111808118913239 No Hit GCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 5900 0.4434593133596252 TruSeq Adapter, Index 16 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 3762 0.28276168421337455 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3150 0.23676217577674905 No Hit CTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGCT 2836 0.21316112079455882 TruSeq Adapter, Index 19 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCT 2063 0.15506043448489945 No Hit TCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 1621 0.1218385672806699 TruSeq Adapter, Index 16 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCT 1561 0.11732881155158897 No Hit CGCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTG 1471 0.11056417795796757 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.261381683927756E-4 0.0 0.0 0.22954656661021955 0.0 2 5.261381683927756E-4 0.0 0.0 1.2423625407663128 0.0 3 5.261381683927756E-4 0.0 0.0 1.7732359526746233 0.0 4 5.261381683927756E-4 0.0 0.0 2.5390676380680506 0.0 5 5.261381683927756E-4 0.0 0.0 4.833330702642491 0.0 6 5.261381683927756E-4 0.0 0.0 6.026386580770852 0.0 7 5.261381683927756E-4 0.0 0.0 7.240037010062017 0.0 8 5.261381683927756E-4 0.0 0.0 9.030560359698116 0.0 9 5.261381683927756E-4 0.0 0.0 9.832094277946767 0.0 10 5.261381683927756E-4 0.0 0.0 11.825406310200542 0.0 11 5.261381683927756E-4 0.0 0.0 13.649827990400233 0.0 12 5.261381683927756E-4 0.0 0.0 15.631489820353881 0.0 13 5.261381683927756E-4 0.0 0.0 16.30712639116569 0.0 14 5.261381683927756E-4 0.0 0.0 16.62679290976204 0.0 15 5.261381683927756E-4 0.0 0.0 17.14699323311153 0.0 16 5.261381683927756E-4 0.0 0.0 17.93424625821809 0.0 17 6.01300763877458E-4 0.0 0.0 18.855965166646747 0.0 18 6.01300763877458E-4 0.0 0.0 19.866225612556363 0.0 19 6.01300763877458E-4 0.0 0.0 20.555692100937353 0.0 20 6.01300763877458E-4 0.0 0.0 21.20547273890243 0.0 21 6.01300763877458E-4 0.0 0.0 21.954543165502773 0.0 22 6.01300763877458E-4 0.0 0.0 22.714286680661942 0.0 23 6.01300763877458E-4 0.0 0.0 23.464634871385524 0.0 24 6.01300763877458E-4 0.0 0.0 24.070445390992063 0.0 25 6.01300763877458E-4 0.0 0.0 24.627325060938073 0.0 26 6.01300763877458E-4 0.0 0.0 25.15218546520761 0.0 27 6.01300763877458E-4 0.0 0.0 25.739280498538463 0.0 28 6.764633593621402E-4 0.0 0.0 26.263238951662185 0.0 29 6.764633593621402E-4 0.0 0.0 26.81365463839651 0.0 30 6.764633593621402E-4 0.0 0.0 27.477340356526256 0.0 31 6.764633593621402E-4 0.0 0.0 28.018135231038546 0.0 32 7.516259548468224E-4 0.0 0.0 28.545776651341015 0.0 33 8.267885503315046E-4 0.0 0.0 29.06289530827563 0.0 34 9.019511458161868E-4 0.0 0.0 29.590987704151004 0.0 35 9.019511458161868E-4 0.0 0.0 30.182517330615454 0.0 36 9.771137413008692E-4 0.0 0.0 30.68745964708155 0.0 37 0.0010522763367855513 0.0 0.0 31.22652578189769 0.0 38 0.0010522763367855513 0.0 0.0 31.786487118258574 0.0 39 0.0010522763367855513 0.0 0.0 32.52082567614392 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTACG 20 7.033687E-4 45.000004 45 TAACGCG 35 1.21212E-7 45.0 1 GCGTAAG 160 0.0 42.187504 1 CGTTTTT 1770 0.0 41.44068 1 ATAACGC 50 1.0822987E-9 40.5 11 CACAACG 335 0.0 40.298508 12 GCGTTAG 95 0.0 40.263157 1 CGTTAGG 180 0.0 40.0 2 GTACGTC 45 1.9286745E-8 40.0 10 CGTAAGG 285 0.0 39.473686 2 ATTGTCG 40 3.458772E-7 39.375004 1 TACGGCT 1040 0.0 39.158653 7 CGAATAT 150 0.0 39.0 14 GCTAACG 65 9.094947E-12 38.07692 1 CGTTGTA 30 1.14001865E-4 37.499996 11 CTATACG 30 1.14001865E-4 37.499996 1 ACGTAAG 60 1.5643309E-10 37.499996 1 TAGTACG 60 1.5643309E-10 37.499996 1 TGTAGCG 85 0.0 37.058826 1 ACGGGAT 525 0.0 36.85714 5 >>END_MODULE