##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936460.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1463050 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08790403608899 33.0 31.0 34.0 30.0 34.0 2 32.20364375790301 33.0 31.0 34.0 30.0 34.0 3 32.07566727042821 33.0 31.0 34.0 30.0 34.0 4 35.80642630122006 37.0 35.0 37.0 35.0 37.0 5 34.897339803834456 37.0 35.0 37.0 33.0 37.0 6 35.388739961040294 37.0 35.0 37.0 33.0 37.0 7 35.96167595092444 37.0 35.0 37.0 35.0 37.0 8 35.98634223027238 37.0 35.0 37.0 35.0 37.0 9 37.86024742831756 39.0 38.0 39.0 35.0 39.0 10 37.567381155804654 39.0 37.0 39.0 35.0 39.0 11 37.491331123338234 39.0 37.0 39.0 35.0 39.0 12 37.44576398619323 39.0 37.0 39.0 35.0 39.0 13 37.436057551006456 39.0 37.0 39.0 35.0 39.0 14 38.57081712860121 40.0 38.0 41.0 34.0 41.0 15 38.66917740336967 40.0 38.0 41.0 34.0 41.0 16 38.65471378285089 40.0 38.0 41.0 34.0 41.0 17 38.64224872697447 40.0 38.0 41.0 34.0 41.0 18 38.43961860496907 40.0 38.0 41.0 34.0 41.0 19 38.182420969891666 40.0 37.0 41.0 34.0 41.0 20 38.003353952359795 40.0 35.0 41.0 34.0 41.0 21 37.890522538532515 40.0 35.0 41.0 34.0 41.0 22 37.93631318136769 40.0 35.0 41.0 34.0 41.0 23 37.931402891220394 40.0 35.0 41.0 34.0 41.0 24 37.879556406137866 40.0 35.0 41.0 34.0 41.0 25 37.73129489764533 40.0 35.0 41.0 34.0 41.0 26 37.7518321315061 40.0 35.0 41.0 34.0 41.0 27 37.758531834182016 40.0 35.0 41.0 34.0 41.0 28 37.61989815795769 40.0 35.0 41.0 33.0 41.0 29 37.50816923550118 40.0 35.0 41.0 33.0 41.0 30 37.27274665937596 39.0 35.0 41.0 33.0 41.0 31 37.02968046204846 39.0 35.0 41.0 32.0 41.0 32 36.66879190731691 39.0 35.0 41.0 31.0 41.0 33 36.185752366631355 39.0 35.0 41.0 30.0 41.0 34 35.77185537062985 39.0 35.0 41.0 25.0 41.0 35 35.51801715594136 39.0 35.0 41.0 23.0 41.0 36 35.35165237004887 39.0 35.0 41.0 23.0 41.0 37 35.28550972283927 39.0 35.0 41.0 22.0 41.0 38 35.172138341136666 39.0 35.0 41.0 21.0 41.0 39 35.10386521308226 39.0 35.0 41.0 21.0 41.0 40 34.98905710672909 39.0 35.0 41.0 21.0 41.0 41 34.85075287925908 39.0 35.0 41.0 20.0 41.0 42 34.830651037216775 39.0 35.0 41.0 19.0 41.0 43 34.727862342366976 39.0 35.0 41.0 18.0 41.0 44 34.59374047366802 39.0 34.0 41.0 18.0 41.0 45 34.541521479101874 38.0 34.0 41.0 19.0 41.0 46 34.429717371245005 38.0 34.0 41.0 18.0 41.0 47 34.33821468849322 38.0 34.0 40.0 18.0 41.0 48 34.25437066402379 38.0 34.0 40.0 18.0 41.0 49 34.2157308362667 38.0 34.0 40.0 18.0 41.0 50 34.113499196883225 38.0 34.0 40.0 18.0 41.0 51 33.0743829670893 36.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 12.0 9 24.0 10 42.0 11 33.0 12 31.0 13 41.0 14 39.0 15 78.0 16 109.0 17 238.0 18 481.0 19 983.0 20 1648.0 21 2714.0 22 4290.0 23 6741.0 24 12059.0 25 21289.0 26 31719.0 27 35643.0 28 32740.0 29 28890.0 30 27665.0 31 29796.0 32 35011.0 33 46323.0 34 77487.0 35 93878.0 36 98967.0 37 146513.0 38 264376.0 39 462876.0 40 311.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.554013875123886 19.236663135231193 21.522641058063634 23.686681931581287 2 42.45931444584942 20.608933392570318 21.61525580123714 15.316496360343118 3 27.807730426164518 20.82334848433068 36.09985988175387 15.26906120775093 4 24.59191415194286 22.616725334062405 35.82222070332525 16.969139810669493 5 21.864187826800176 27.592836881856396 33.7481972591504 16.794778032193022 6 23.408632650968865 29.037421824271213 33.52346126243122 14.030484262328697 7 70.43074399371176 4.99579645261611 19.503913058337037 5.069546495335088 8 72.20436758825741 4.04675164895253 19.089983254160828 4.6588975086292335 9 65.571716619391 6.395611906633403 21.577184648508254 6.455486825467345 10 33.501725846690135 25.215201120945967 27.296606404429102 13.986466627934794 11 24.297802535798503 22.610232049485663 35.99535217525033 17.0966132394655 12 21.973890160965105 20.48774819725915 38.398756023375824 19.13960561839992 13 21.09135026144014 20.176617340487336 40.52445234270872 18.207580055363795 14 18.118041078568744 22.973787635419157 40.089060524247294 18.819110761764808 15 17.641639041727895 23.906223300639077 40.48993540890605 17.962202248726975 16 20.932640716311816 23.899388264242507 38.01462697788865 17.153344041557023 17 20.724308806944396 24.359386213731586 36.36731485595161 18.54899012337241 18 21.245070229998973 24.018796350090565 36.462185161135984 18.273948258774478 19 20.559311028331226 26.076825809097432 34.80202317077338 18.561839991797957 20 20.77468302518711 26.49471993438365 34.37975462219337 18.350842418235878 21 20.615084925327228 25.72735039814087 36.50353713133522 17.15402754519668 22 20.50852670790472 22.502716926967636 37.068862991695426 19.919893373432213 23 18.911862205666242 24.172037866101636 36.84563070298349 20.070469225248626 24 19.681624004647823 23.610949728307304 36.99689005843956 19.710536208605312 25 21.469396124534363 24.59868083797546 34.293633163596596 19.638289873893576 26 20.16896209972318 24.965858993199138 34.41768907419432 20.44748983288336 27 20.57844913024162 23.457571511568297 35.06920474351526 20.894774614674823 28 20.083250743310206 23.839718396500462 35.03195379515396 21.045077065035372 29 21.472198489456957 23.2621578209904 34.89450121321896 20.371142476333688 30 23.456682956836744 22.11031748744062 35.19449096066437 19.238508595058267 31 23.101876217490858 23.085882232322888 34.52247018215372 19.289771368032536 32 22.879259082054613 23.28621714910632 34.782543317043164 19.051980451795906 33 22.09432350227265 24.669696866135812 33.58661699873552 19.649362632856022 34 20.342982126379823 25.5111581969174 34.042377225658726 20.10348245104405 35 20.26137179180479 26.676190150712554 32.40463415467688 20.65780390280578 36 20.895184716858616 27.879771709784357 30.707836369228662 20.51720720412836 37 20.060558422473598 26.89238235193602 31.544718225624553 21.502340999965824 38 19.708964150234102 27.38600868049622 31.69009944977957 21.214927719490106 39 20.16219541369058 25.48894432862855 30.876320016404087 23.472540241276786 40 21.890844468746796 25.27049656539421 31.86685349099484 20.97180547486415 41 20.386521308225966 25.614367246505587 31.66638187348348 22.33272957178497 42 20.72465055876423 26.18905710672909 31.730562865247258 21.355729469259423 43 20.851303783192645 24.85451625029903 32.665254092478044 21.62892587403028 44 21.978537985714773 24.64625269129558 31.27193192303749 22.103277399952155 45 21.006322408666826 24.018659649362633 31.40822254878507 23.56679539318547 46 21.57233177266669 24.443730562865248 30.76326851440484 23.220669150063227 47 20.662315026827518 24.527938211270975 32.4356652199173 22.37408154198421 48 20.212159529749496 24.522060079969926 32.64816650148662 22.617613888793958 49 20.951847168586173 23.747582105874717 32.398414271556 22.902156453983118 50 19.361265848740643 23.79091623662896 34.05392843716893 22.79388947746147 51 19.47718806602645 23.435631044735313 32.81220737500427 24.274973514233963 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 546.0 1 1020.0 2 1494.0 3 25210.0 4 48926.0 5 33241.0 6 17556.0 7 17074.0 8 16592.0 9 16407.5 10 16223.0 11 16013.5 12 15804.0 13 15064.0 14 14324.0 15 13503.0 16 12682.0 17 11955.0 18 11228.0 19 10673.0 20 10118.0 21 10114.0 22 10110.0 23 10074.0 24 10038.0 25 10983.5 26 13047.0 27 14165.0 28 16442.5 29 18720.0 30 20884.0 31 23048.0 32 26832.0 33 30616.0 34 34946.0 35 39276.0 36 42349.5 37 45423.0 38 49735.5 39 54048.0 40 57572.0 41 61096.0 42 66038.5 43 70981.0 44 77535.0 45 84089.0 46 104548.0 47 125007.0 48 131286.5 49 137566.0 50 133253.0 51 128940.0 52 112001.0 53 95062.0 54 84246.0 55 73430.0 56 66704.0 57 59978.0 58 55220.0 59 50462.0 60 45893.0 61 41324.0 62 37375.0 63 33426.0 64 28758.0 65 24090.0 66 21142.0 67 18194.0 68 15163.5 69 12133.0 70 10478.5 71 8824.0 72 7465.0 73 6106.0 74 5244.5 75 3352.5 76 2322.0 77 1889.0 78 1456.0 79 1074.5 80 693.0 81 497.0 82 301.0 83 228.0 84 155.0 85 127.0 86 99.0 87 66.5 88 34.0 89 26.0 90 18.0 91 12.5 92 7.0 93 6.0 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1463050.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.411645634337226 #Duplication Level Percentage of deduplicated Percentage of total 1 73.93594665335762 25.44257595874604 2 8.545686232044142 5.881422526386751 3 3.519521337395432 3.6333756319482076 4 2.1565661038423087 2.9684395420977934 5 1.5344244284369835 2.6401034842021964 6 1.1927546568246439 2.4626790347613094 7 1.003194386845005 2.4165098819726576 8 0.8508156246846285 2.3422372621443754 9 0.7504795153861554 2.3242711625367765 >10 6.390370406062841 40.41022280167642 >50 0.08599235689542653 2.0090120151995596 >100 0.029992596209416213 1.87527326879438 >500 0.0014185673384783794 0.3379409091007849 >1k 0.0020265247692548274 1.668574521678597 >5k 6.079574307764483E-4 1.6160632743503074 >10k+ 2.0265247692548277E-4 1.9712987244038356 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28268 1.932128088582072 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTT 9976 0.6818632309217046 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTC 7496 0.5123543282867982 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCT 5702 0.38973377533235365 No Hit CGCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTG 4741 0.3240490755613274 No Hit CGTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCT 3938 0.2691637332968798 No Hit CCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTGC 2671 0.18256382215235295 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTC 2544 0.17388332592871056 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCC 2115 0.14456101978743036 No Hit CTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTGCT 2028 0.1386145381224155 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGT 1810 0.12371415877789549 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCG 1467 0.10026998393766447 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.101021837941287E-4 0.0 0.0 0.14708998325416084 0.0 2 4.101021837941287E-4 0.0 0.0 0.5059293940740235 0.0 3 4.101021837941287E-4 0.0 0.0 1.054099313078842 0.0 4 4.101021837941287E-4 0.0 0.0 1.6386316257134068 0.0 5 4.784525477598168E-4 0.0 0.0 3.0242302040258364 0.0 6 4.784525477598168E-4 0.0 0.0 4.993950992789037 0.0 7 5.46802911725505E-4 0.0 0.0 6.356378797717098 0.0 8 5.46802911725505E-4 0.0 0.0 7.9304876798468955 0.0 9 5.46802911725505E-4 0.0 0.0 8.955606438604285 0.0 10 5.46802911725505E-4 0.0 0.0 10.187348347629952 0.0 11 5.46802911725505E-4 0.0 0.0 11.30774751375551 0.0 12 5.46802911725505E-4 0.0 0.0 12.13109599808619 0.0 13 5.46802911725505E-4 0.0 0.0 12.59649362632856 0.0 14 6.151532756911931E-4 0.0 0.0 12.911247052390554 0.0 15 6.151532756911931E-4 0.0 0.0 13.172892245651209 0.0 16 6.151532756911931E-4 0.0 0.0 13.52523837189433 0.0 17 6.151532756911931E-4 0.0 0.0 13.930761081302759 0.0 18 6.151532756911931E-4 0.0 0.0 14.382762038207854 0.0 19 6.151532756911931E-4 0.0 0.0 14.688766617682239 0.0 20 6.835036396568812E-4 0.0 0.0 15.01418270052288 0.0 21 6.835036396568812E-4 0.0 0.0 15.385940330132257 0.0 22 6.835036396568812E-4 0.0 0.0 15.785789959331533 0.0 23 6.835036396568812E-4 0.0 0.0 16.190424114008408 0.0 24 6.835036396568812E-4 0.0 0.0 16.53737056149824 0.0 25 7.518540036225693E-4 0.0 0.0 16.85027852773316 0.0 26 7.518540036225693E-4 0.0 0.0 17.15211373500564 0.0 27 7.518540036225693E-4 0.0 0.0 17.50719387580739 0.0 28 8.202043675882574E-4 0.0 0.0 17.84969754963945 0.0 29 8.202043675882574E-4 0.0 0.0 18.211749427565703 0.0 30 8.202043675882574E-4 0.0 0.0 18.65691534807423 0.0 31 8.885547315539455E-4 0.0 0.0 19.019787430368066 0.0 32 8.885547315539455E-4 0.0 0.0 19.396397935819007 0.0 33 0.0010252554594853218 0.0 0.0 19.75475889409111 0.0 34 0.0010252554594853218 0.0 0.0 20.11428180855063 0.0 35 0.0010252554594853218 0.0 0.0 20.48679129216363 0.0 36 0.00109360582345101 0.0 0.0 20.831482177642595 0.0 37 0.00109360582345101 0.0 0.0 21.212740507843204 0.0 38 0.00109360582345101 0.0 0.0 21.63254844332046 0.0 39 0.001161956187416698 0.0 0.0 22.20969891664673 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 17830 0.0 44.0788 1 CGTTATT 490 0.0 41.785713 1 CGTTTCT 1115 0.0 41.367714 1 CCATACG 170 0.0 41.02941 2 TCACGAC 55 6.184564E-11 40.909092 25 GAACCCG 185 0.0 40.135136 20 CGTTCTG 870 0.0 40.08621 1 TCGTAAT 40 3.4590812E-7 39.375 17 TACGGGT 70 0.0 38.57143 4 TAGTACG 35 6.2494582E-6 38.57143 1 GTTTTTT 20500 0.0 38.28293 2 CGAACCC 195 0.0 38.076923 19 TCCGAAC 195 0.0 38.076923 17 CGTTTTC 760 0.0 37.894737 1 CCGAACT 30 1.140074E-4 37.500004 34 GCCGATG 150 0.0 37.5 9 TAGCCGT 175 0.0 37.285713 44 CCGAACC 205 0.0 36.219513 18 AACGAGC 375 0.0 36.0 15 TTGCCGA 25 0.0021072961 36.0 36 >>END_MODULE