##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936459.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1201226 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07296711859384 33.0 31.0 34.0 30.0 34.0 2 32.19960939906396 33.0 31.0 34.0 30.0 34.0 3 32.05807233609662 33.0 31.0 34.0 30.0 34.0 4 35.79577198628734 37.0 35.0 37.0 35.0 37.0 5 34.97452103101332 37.0 35.0 37.0 33.0 37.0 6 35.41816693944354 37.0 35.0 37.0 33.0 37.0 7 35.9581968755255 37.0 35.0 37.0 35.0 37.0 8 35.96789863023278 37.0 35.0 37.0 35.0 37.0 9 37.82719654752728 39.0 38.0 39.0 35.0 39.0 10 37.56897619598644 39.0 37.0 39.0 35.0 39.0 11 37.48401300005161 39.0 37.0 39.0 35.0 39.0 12 37.32274359695844 39.0 37.0 39.0 35.0 39.0 13 37.261225614497185 39.0 37.0 39.0 34.0 39.0 14 38.34476859475236 40.0 38.0 41.0 34.0 41.0 15 38.455625336114934 40.0 38.0 41.0 34.0 41.0 16 38.439460184844485 40.0 38.0 41.0 34.0 41.0 17 38.40663289006398 40.0 38.0 41.0 34.0 41.0 18 38.17026104996062 39.0 37.0 41.0 34.0 41.0 19 37.91259263452506 39.0 37.0 41.0 34.0 41.0 20 37.72572438492007 39.0 35.0 41.0 34.0 41.0 21 37.615457873872195 39.0 35.0 41.0 33.0 41.0 22 37.6674747299842 39.0 35.0 41.0 34.0 41.0 23 37.66948101356447 39.0 35.0 41.0 34.0 41.0 24 37.61223866283281 39.0 35.0 41.0 34.0 41.0 25 37.456575199005016 39.0 35.0 41.0 33.0 41.0 26 37.46741079530413 39.0 35.0 41.0 33.0 41.0 27 37.47155156481794 39.0 35.0 41.0 34.0 41.0 28 37.32911458792933 39.0 35.0 41.0 33.0 41.0 29 37.221457078018624 39.0 35.0 41.0 33.0 41.0 30 36.97107122223462 39.0 35.0 41.0 33.0 41.0 31 36.72176426417676 39.0 35.0 41.0 32.0 41.0 32 36.361002842096326 39.0 35.0 41.0 31.0 41.0 33 35.8534422331851 39.0 35.0 41.0 29.0 41.0 34 35.390171374911965 39.0 35.0 41.0 24.0 41.0 35 35.08614115911577 38.0 35.0 41.0 23.0 41.0 36 34.92931804672892 38.0 35.0 41.0 22.0 41.0 37 34.827959934267156 38.0 35.0 41.0 21.0 41.0 38 34.671912695862396 38.0 34.0 41.0 21.0 41.0 39 34.56905944426777 38.0 34.0 40.0 20.0 41.0 40 34.432873580824925 38.0 34.0 40.0 19.0 41.0 41 34.27588064194415 38.0 34.0 40.0 18.0 41.0 42 34.24805074149244 38.0 34.0 40.0 18.0 41.0 43 34.14844667031849 38.0 34.0 40.0 18.0 41.0 44 34.01685944193682 37.0 34.0 40.0 18.0 41.0 45 33.96700537617401 37.0 34.0 40.0 18.0 41.0 46 33.871768509839114 37.0 33.0 40.0 18.0 41.0 47 33.78711832744213 37.0 33.0 40.0 18.0 41.0 48 33.71440095369231 37.0 33.0 40.0 18.0 41.0 49 33.669855630830504 36.0 33.0 40.0 18.0 41.0 50 33.52871149975109 36.0 33.0 40.0 18.0 41.0 51 32.47293348628818 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 18.0 10 25.0 11 18.0 12 31.0 13 27.0 14 43.0 15 69.0 16 130.0 17 248.0 18 449.0 19 935.0 20 1544.0 21 2386.0 22 3614.0 23 5544.0 24 9470.0 25 16813.0 26 26163.0 27 30939.0 28 29779.0 29 26738.0 30 25440.0 31 27467.0 32 32599.0 33 43646.0 34 81152.0 35 92991.0 36 87198.0 37 122764.0 38 209458.0 39 323279.0 40 239.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.57761154020975 18.86023113052831 21.144896963602186 26.41726036565975 2 43.01863263032934 20.541763165299454 21.465652591602247 14.973951612768953 3 27.14776403441151 20.433207406433095 37.43025875230806 14.988769806847339 4 24.117276848819454 22.050804761135705 37.461643354372946 16.370275035671888 5 21.854921555144493 26.60714969539454 35.020803745506676 16.517125003954295 6 22.80470119694379 28.310076538469865 34.57625792315518 14.308964341431171 7 69.28171717894884 4.899327853376468 20.56590516688783 5.2530498007868625 8 71.10152460902445 3.855810646789197 20.413977053443734 4.628687690742624 9 65.36613426615807 5.313821046164502 22.41326777808672 6.906776909590702 10 36.68152370994301 20.40099032155481 28.347371768509838 14.57011419999234 11 28.030029320044687 21.770258053022495 33.494196762307844 16.705515864624974 12 25.427771293661642 19.30119727678222 36.71865244342031 18.55237898613583 13 22.85997805575304 18.523575080792458 39.50688713031519 19.10955973313931 14 18.215889432962655 20.979565876862473 40.55331802674934 20.251226663425534 15 18.265505408640838 21.231974665883023 41.503097668548634 18.999422256927506 16 22.64602997271121 22.175344190019196 37.7465189731158 17.43210686415379 17 22.245106249781475 22.885452029842842 36.18294975300235 18.686491967373335 18 22.79462815490174 22.81335901820307 36.47490147565903 17.917111351236155 19 21.574957585000657 25.652125411870873 34.367387985275045 18.405529017853425 20 22.33334942800106 25.689836883317547 33.580858223181984 18.395955465499412 21 21.73837396126957 25.713063153811188 35.55808815327007 16.990474731649165 22 21.211995078361607 22.36231982990711 36.68160695822435 19.744078133506935 23 20.192869618206732 22.800538782876828 36.7929099103749 20.21368168854154 24 21.59268946892591 21.654043452272926 36.90854177315509 19.844725305646065 25 23.184063615006668 22.68948557557029 33.757094834777135 20.369355974645902 26 20.502719721351355 22.516662143510047 34.633699237279245 22.346918897859354 27 20.856941158449786 21.543739479498445 35.50372702555556 22.095592336496214 28 20.70476330016167 23.451956584356314 34.08467682184701 21.758603293635005 29 22.800622031158166 23.73475099606569 32.83112420144086 20.633502771335284 30 25.149056047737893 22.167685348135986 33.94498620575978 18.738272398366334 31 25.220649569689634 23.38003006927922 32.86875242460619 18.53056793642495 32 25.77957853060124 24.218756503771978 31.495072534227532 18.506592431399255 33 25.618742851053838 25.54648334285139 30.41342761478689 18.42134619130788 34 23.268976861972686 26.230367974053177 32.73314097430459 17.767514189669555 35 23.029554804841055 27.116795673753312 32.25030094253704 17.603348578868587 36 24.400737246779542 29.238627868527654 28.711000261399604 17.649634623293203 37 24.79949651439446 28.127513057492926 29.349930820678203 17.723059607434404 38 24.328477738577085 27.32658134272818 29.942741832094878 18.402199086599857 39 23.972341591007854 25.51143581640757 29.59534675406626 20.920875838518313 40 25.827696037215315 23.210869561597903 31.36370674627422 19.597727654912564 41 23.06485207612889 24.36951914127733 31.036041510923006 21.529587271670778 42 22.62272045393623 25.204915644516518 30.702215902752688 21.470147998794566 43 22.255762029792894 23.704698366502225 31.74448438511987 22.29505521858501 44 23.24033945319199 23.22485527286289 30.431742236681526 23.103063037263595 45 22.17409546579911 23.260319040713405 30.3712207361479 24.194364757339585 46 22.499679494116844 23.925472808613865 30.321022022500344 23.253825674768944 47 21.67110934994747 24.16864103840576 32.08771704908152 22.072532562565243 48 21.01786008627852 23.517223236926274 33.04715349151617 22.417763185279043 49 22.293223756395548 22.506006363498628 32.285764710387554 22.91500516971827 50 20.516372439490986 22.778144995196577 33.99110575362172 22.714376811690723 51 20.383008692785538 22.175593934863215 33.39421557641942 24.047181795931824 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 586.0 1 991.5 2 1397.0 3 25571.5 4 49746.0 5 32654.0 6 15562.0 7 15115.0 8 14668.0 9 14590.5 10 14513.0 11 14110.5 12 13708.0 13 12834.5 14 11961.0 15 11199.5 16 10438.0 17 9637.5 18 8837.0 19 8470.5 20 8104.0 21 7656.0 22 7208.0 23 7121.0 24 7034.0 25 7387.0 26 8791.0 27 9842.0 28 10964.5 29 12087.0 30 13415.5 31 14744.0 32 17238.0 33 19732.0 34 22887.5 35 26043.0 36 28068.5 37 30094.0 38 32158.5 39 34223.0 40 36534.5 41 38846.0 42 42151.5 43 45457.0 44 51406.0 45 57355.0 46 74167.5 47 90980.0 48 97119.0 49 103258.0 50 102104.5 51 100951.0 52 89768.0 53 78585.0 54 71367.5 55 64150.0 56 61282.5 57 58415.0 58 56551.5 59 54688.0 60 52684.0 61 50680.0 62 46275.5 63 41871.0 64 36840.0 65 31809.0 66 27153.5 67 22498.0 68 18821.0 69 15144.0 70 12876.0 71 10608.0 72 8934.0 73 7260.0 74 6035.0 75 3752.0 76 2694.0 77 2108.5 78 1523.0 79 1119.0 80 715.0 81 555.0 82 395.0 83 278.0 84 161.0 85 105.0 86 49.0 87 31.5 88 14.0 89 13.5 90 13.0 91 13.5 92 14.0 93 9.5 94 5.0 95 7.5 96 10.0 97 5.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1201226.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.14393396064653 #Duplication Level Percentage of deduplicated Percentage of total 1 71.71891245222334 25.9220363540255 2 8.51735207677 6.157012219647008 3 3.9498449078511673 4.282888005125057 4 2.4744745811570907 3.5774898339456143 5 1.9622217900820094 3.5461207398432877 6 1.5710587285327555 3.407054575943113 7 1.3867100680275146 3.50848099849451 8 1.1942243300627344 3.4531172255987848 9 1.0707508054446835 3.4831031760271545 >10 6.061510015132445 32.698568265128074 >50 0.061573911998412584 1.5611082266940894 >100 0.026918868029386415 1.7450559984030372 >500 0.0016385396220792395 0.46634093231792734 >1k 0.0016385396220792395 1.2186456438874138 >5k 7.022312666053884E-4 1.6121419566977695 >10k+ 4.681541777369256E-4 3.3608358482215794 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29605 2.464565369047956 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTT 10119 0.8423893588716862 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTC 8049 0.6700654164994764 No Hit CGCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTG 5594 0.4656908858116624 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCT 5412 0.45053969860792226 No Hit CGTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCT 3019 0.2513265613631407 No Hit CCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGC 2464 0.20512376521986705 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTC 2353 0.1958832059912123 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCC 1974 0.16433210736364348 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGT 1792 0.1491809201599033 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCG 1407 0.11713033184429908 No Hit CTGTCTCTTATACACATCTGACGCGGAAATGGTCGTATGCCGTCTTCTGCT 1395 0.11613135246822828 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.1624140669615877E-4 0.0 0.0 0.1229577115380453 0.0 2 4.1624140669615877E-4 0.0 0.0 0.4642756650288955 0.0 3 4.1624140669615877E-4 0.0 0.0 1.136588785124531 0.0 4 4.1624140669615877E-4 0.0 0.0 1.6574732814641042 0.0 5 4.1624140669615877E-4 0.0 0.0 3.0807691475209493 0.0 6 4.1624140669615877E-4 0.0 0.0 5.149155945675502 0.0 7 4.994896880353905E-4 0.0 0.0 6.5692051287601165 0.0 8 4.994896880353905E-4 0.0 0.0 8.138018990597939 0.0 9 4.994896880353905E-4 0.0 0.0 9.326221710152794 0.0 10 4.994896880353905E-4 0.0 0.0 10.715552277423233 0.0 11 4.994896880353905E-4 0.0 0.0 11.85996640099365 0.0 12 4.994896880353905E-4 0.0 0.0 12.637921590108773 0.0 13 4.994896880353905E-4 0.0 0.0 13.08904402668607 0.0 14 4.994896880353905E-4 0.0 0.0 13.406053482025863 0.0 15 4.994896880353905E-4 0.0 0.0 13.655132339792845 0.0 16 4.994896880353905E-4 0.0 0.0 13.955075897458096 0.0 17 4.994896880353905E-4 0.0 0.0 14.268089435293609 0.0 18 4.994896880353905E-4 0.0 0.0 14.636546328501048 0.0 19 5.827379693746223E-4 0.0 0.0 14.883543979234549 0.0 20 6.65986250713854E-4 0.0 0.0 15.154933376400445 0.0 21 6.65986250713854E-4 0.0 0.0 15.438643519204547 0.0 22 6.65986250713854E-4 0.0 0.0 15.779961472695396 0.0 23 6.65986250713854E-4 0.0 0.0 16.135764627139274 0.0 24 6.65986250713854E-4 0.0 0.0 16.433626977771045 0.0 25 6.65986250713854E-4 0.0 0.0 16.69752402961641 0.0 26 6.65986250713854E-4 0.0 0.0 16.972409854598553 0.0 27 6.65986250713854E-4 0.0 0.0 17.262446866784437 0.0 28 7.492345320530857E-4 0.0 0.0 17.52842512566328 0.0 29 7.492345320530857E-4 0.0 0.0 17.81463271690756 0.0 30 7.492345320530857E-4 0.0 0.0 18.225629481879345 0.0 31 8.324828133923175E-4 0.0 0.0 18.51117108687291 0.0 32 8.324828133923175E-4 0.0 0.0 18.8266820731486 0.0 33 8.324828133923175E-4 0.0 0.0 19.136282431449203 0.0 34 8.324828133923175E-4 0.0 0.0 19.445549796624448 0.0 35 9.157310947315492E-4 0.0 0.0 19.77163331463022 0.0 36 9.157310947315492E-4 0.0 0.0 20.101712750140273 0.0 37 9.157310947315492E-4 0.0 0.0 20.457182911458794 0.0 38 9.157310947315492E-4 0.0 0.0 20.942187398541158 0.0 39 9.157310947315492E-4 0.0 0.0 21.57911999906762 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCCTA 20 7.033413E-4 45.000004 28 CGTTTTT 15950 0.0 44.167713 1 CGTTTCT 1240 0.0 41.552418 1 CGTTATT 450 0.0 41.5 1 CGTTCTG 870 0.0 41.12069 1 TCACGAC 55 6.184564E-11 40.909092 25 GTTTTTT 17865 0.0 39.219147 2 CGTTTTC 660 0.0 39.204544 1 TACGAAT 110 0.0 38.863636 12 TAGCCGT 145 0.0 38.793106 44 CGTAAGG 140 0.0 38.571426 2 TATAGCG 30 1.1399524E-4 37.500004 1 TAGTACG 30 1.1399524E-4 37.500004 1 CACGACC 165 0.0 36.81818 27 AACACGT 135 0.0 36.666668 41 TCGAGTA 25 0.0021071467 36.0 23 TAGGACG 25 0.0021071467 36.0 1 GCTAACG 25 0.0021071467 36.0 1 ACGACCA 170 0.0 35.735294 28 TAACGCC 45 8.7003536E-7 35.000004 12 >>END_MODULE