##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936455.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 541833 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.826895002703786 33.0 31.0 34.0 30.0 34.0 2 31.843944536416203 33.0 31.0 34.0 30.0 34.0 3 31.92047549706275 33.0 31.0 34.0 30.0 34.0 4 35.63463281121674 37.0 35.0 37.0 33.0 37.0 5 34.62889488089504 37.0 35.0 37.0 33.0 37.0 6 35.1239459390624 37.0 35.0 37.0 32.0 37.0 7 35.67613083736133 37.0 35.0 37.0 33.0 37.0 8 35.58378873195247 37.0 35.0 37.0 33.0 37.0 9 37.52410798161057 39.0 37.0 39.0 35.0 39.0 10 37.22410041470342 39.0 37.0 39.0 34.0 39.0 11 37.1323655074534 39.0 37.0 39.0 34.0 39.0 12 36.976103338113404 39.0 35.0 39.0 33.0 39.0 13 36.725592571881 39.0 35.0 39.0 33.0 39.0 14 37.766121664793395 40.0 36.0 41.0 33.0 41.0 15 37.74799246262225 40.0 36.0 41.0 33.0 41.0 16 37.96656349834728 40.0 36.0 41.0 33.0 41.0 17 37.850769517545075 40.0 36.0 41.0 33.0 41.0 18 37.87933920599151 40.0 36.0 41.0 33.0 41.0 19 37.82144498397108 40.0 36.0 41.0 33.0 41.0 20 37.709977059352234 40.0 36.0 41.0 33.0 41.0 21 37.7938589934537 39.0 36.0 41.0 33.0 41.0 22 37.831206294190274 40.0 36.0 41.0 33.0 41.0 23 37.80664337535735 40.0 36.0 41.0 33.0 41.0 24 37.72035479566582 39.0 36.0 41.0 33.0 41.0 25 37.66089736136411 39.0 36.0 41.0 33.0 41.0 26 37.60613140949333 39.0 35.0 41.0 33.0 41.0 27 37.62784289624294 39.0 36.0 41.0 33.0 41.0 28 37.54600771824529 39.0 36.0 41.0 33.0 41.0 29 37.4899609289209 39.0 36.0 41.0 33.0 41.0 30 37.46190615927786 39.0 36.0 41.0 33.0 41.0 31 37.4625945632695 39.0 36.0 41.0 33.0 41.0 32 37.3235037363911 39.0 35.0 41.0 33.0 41.0 33 37.18029355908555 39.0 35.0 41.0 32.0 41.0 34 37.071784110602344 39.0 35.0 41.0 32.0 41.0 35 37.10343039275939 39.0 35.0 41.0 32.0 41.0 36 37.052100924085465 39.0 35.0 41.0 32.0 41.0 37 37.02638635889656 39.0 35.0 41.0 32.0 41.0 38 37.015205792190585 39.0 35.0 41.0 32.0 41.0 39 36.934435517954796 39.0 35.0 41.0 32.0 41.0 40 36.836521585064034 39.0 35.0 41.0 31.0 41.0 41 36.57454787729799 39.0 35.0 41.0 30.0 41.0 42 36.810321630465474 39.0 35.0 41.0 31.0 41.0 43 36.66236644870283 39.0 35.0 41.0 31.0 41.0 44 36.57233317276725 39.0 35.0 41.0 31.0 41.0 45 36.597612179398446 39.0 35.0 41.0 31.0 41.0 46 36.473721607949315 39.0 35.0 40.0 31.0 41.0 47 36.29964214065958 38.0 35.0 40.0 30.0 41.0 48 36.300697816485894 38.0 35.0 40.0 30.0 41.0 49 36.38914757868199 39.0 35.0 40.0 31.0 41.0 50 36.2195344321959 39.0 35.0 40.0 30.0 41.0 51 35.08394837523739 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 8.0 10 2.0 11 4.0 12 5.0 13 11.0 14 5.0 15 6.0 16 27.0 17 40.0 18 106.0 19 212.0 20 526.0 21 900.0 22 1427.0 23 2044.0 24 2680.0 25 3339.0 26 3886.0 27 4315.0 28 5183.0 29 6371.0 30 8030.0 31 11043.0 32 15202.0 33 21434.0 34 36862.0 35 51498.0 36 40861.0 37 58408.0 38 102873.0 39 164429.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.5305121688786 19.584816723972146 21.903243250226545 10.981427856922705 2 26.551354384099895 34.00771086294117 22.823822100167394 16.617112652791544 3 26.86916448425991 34.50435835395777 24.209304342851027 14.417172818931295 4 25.661412280167507 22.346737832505585 34.7826728899864 17.20917699734051 5 29.670950274346524 26.64160359372722 23.760457557956048 19.92698857397021 6 21.765008775766702 38.0264767926649 25.39786244101042 14.810651990557977 7 68.75125730621797 5.823196446137463 19.669898289694427 5.755647957950143 8 66.39518080294113 13.457652080991744 12.264480015059991 7.882687101007137 9 62.6912720340031 6.119966853255524 13.327907307233042 17.860853805508338 10 40.364466542274094 21.49758320368084 21.471006749312057 16.66694350473301 11 31.930871689247425 21.51382437023954 26.05950541956655 20.49579852094649 12 25.129144957948295 18.875557598005287 32.29131485162402 23.70398259242239 13 21.888109435933213 24.83551204891544 37.33511986165479 15.941258653496556 14 18.13972201766965 31.856125411335228 28.04683361847654 21.95731895251858 15 14.106375949785265 23.515732707310185 42.89568926218964 19.482202080714906 16 14.974724684543023 25.507674873992542 31.096850874716008 28.420749566748427 17 16.06749681174827 25.444186677444897 32.03385544992645 26.45446106088038 18 16.632246467084876 25.246155180655293 33.713155160353836 24.40844319190599 19 17.758792838383783 27.455322950060257 28.60106342729217 26.184820784263785 20 21.150981944621314 26.17559284871907 34.05126671871223 18.622158487947395 21 19.55417997796369 30.903617904409664 30.05261768847597 19.489584429150682 22 16.689090550040326 24.43262038303315 30.037852991604424 28.840436075322103 23 17.069281494482617 29.553017258085056 29.34631150188342 24.031389745548907 24 21.9178233883872 23.190171141292613 27.84105065582938 27.05095481449081 25 15.104284899590834 33.80617275064457 26.369379495158103 24.720162854606492 26 16.089643857055588 27.479869258609202 30.535607834886395 25.894879049448814 27 19.563777030930193 29.36236810973123 27.859875644340597 23.21397921499798 28 13.538488796363454 25.87623861964849 34.15055930517337 26.43471327881469 29 17.49358197082865 24.66571803489267 29.472918777556924 28.367781216721756 30 16.245226850339495 27.3695031494944 32.75529545081233 23.62997454935377 31 20.15879431485347 26.706014583829337 22.905581609093577 30.22960949222362 32 20.327850094032662 28.516720096413472 23.297215193611315 27.85821461594255 33 17.091797657211725 22.976821271498782 26.540465420157133 33.39091565113236 34 18.080663230183468 28.52428700356014 25.65292257946637 27.74212718679003 35 14.70692999503537 23.393923958119935 28.052924055936053 33.84622199090864 36 17.300164441811408 26.93283723951845 29.559661371677254 26.207336946992893 37 15.308591392550841 23.627206168690353 34.60106711846639 26.463135320292412 38 15.237720847567424 23.45390553916059 24.490571818253965 36.81780179501802 39 18.844182617153255 25.330867628955783 28.178793096765975 27.646156657124983 40 17.583277504323288 22.05181301249647 29.28669903826456 31.078210444915683 41 15.361006066444826 28.461537041856072 28.159229873411178 28.018227018287924 42 17.76414504099972 20.93910854451464 31.904479793589534 29.392266620896105 43 21.537078767812222 20.99004674872147 30.21853596956996 27.254338513896347 44 18.686384919338618 22.452305415137136 30.115183091469145 28.746126574055104 45 17.630155416890446 21.749321285340688 26.69512561988657 33.9253976778823 46 24.736219462454297 24.14360144177265 26.943357086039427 24.176822009733627 47 14.890935029797003 21.678819857779057 37.54551679207431 25.884728320349627 48 19.040737644255703 22.431081163384288 28.859814739966005 29.668366452394 49 18.02972502597664 17.568697366162635 37.550684435979356 26.850893171881374 50 20.44449119931787 18.869282601834882 31.44622051443895 29.240005684408292 51 17.777433268184108 19.82880333977443 26.884298298553244 35.50946509348821 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 428.0 1 493.0 2 558.0 3 1248.5 4 1939.0 5 1371.0 6 803.0 7 776.0 8 749.0 9 808.0 10 867.0 11 918.0 12 969.0 13 908.5 14 848.0 15 881.0 16 914.0 17 943.0 18 972.0 19 1124.5 20 1277.0 21 1407.5 22 1538.0 23 1653.0 24 1768.0 25 2569.0 26 3437.5 27 3505.0 28 4133.5 29 4762.0 30 5720.0 31 6678.0 32 7997.5 33 9317.0 34 10180.0 35 11043.0 36 12766.0 37 14489.0 38 15038.5 39 15588.0 40 18402.5 41 21217.0 42 25390.0 43 29563.0 44 35270.5 45 40978.0 46 73597.5 47 106217.0 48 87882.5 49 69548.0 50 67418.0 51 65288.0 52 50960.5 53 36633.0 54 31221.0 55 25809.0 56 21969.5 57 18130.0 58 15503.0 59 12876.0 60 12022.5 61 11169.0 62 9279.5 63 7390.0 64 6583.0 65 5776.0 66 4488.5 67 3201.0 68 2615.0 69 2029.0 70 1866.0 71 1703.0 72 1403.0 73 1103.0 74 736.0 75 291.5 76 214.0 77 151.0 78 88.0 79 100.0 80 112.0 81 67.5 82 23.0 83 16.0 84 9.0 85 5.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 541833.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.761439180401975 #Duplication Level Percentage of deduplicated Percentage of total 1 69.7294039007554 18.660592015757498 2 12.55752881451508 6.721150872515813 3 5.288392843961877 4.245750103672764 4 2.7940678855978884 2.9909311114536896 5 1.622928686687225 2.1715953671454913 6 1.0633952569034635 1.7074792495409985 7 0.7540477681365828 1.4125582440273508 8 0.5452171338160202 1.1672636133384409 9 0.399922391896443 0.9632248890855788 >10 4.346756365085003 27.798312937287626 >50 0.7947641310487299 13.672051575565817 >100 0.08562185251958515 4.017832856781201 >500 0.008976484538343604 1.5701387013783688 >1k 0.006214489295776342 3.7620870685373906 >5k 6.904988106418158E-4 1.2975772579826885 >10k+ 0.002071496431925447 7.841454135929276 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGC 15943 2.9424195277880822 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCG 13393 2.471794815007576 No Hit GAATCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTC 13099 2.417534554004647 No Hit GCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 7022 1.295971267899888 No Hit GAATGACTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCT 3237 0.5974165471649013 No Hit CCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 3102 0.5725011211941686 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATCCCACTT 2411 0.4449710519661962 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATCCCACTTCGTA 2386 0.44035708419383834 No Hit GAACTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCT 2326 0.4292835615401794 No Hit CTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGCT 2254 0.4159953343557886 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTC 2146 0.3960629935792025 No Hit TCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 1407 0.25967410622830284 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1090 0.2011689948748046 No Hit ACTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 996 0.18382047605073887 No Hit AGATTAGGGATTAATTTAAGTATTTAATTTTTATCTTCCTTGGATCCGTTT 950 0.17533077534960034 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATG 735 0.13565065250732236 No Hit GAATGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTT 633 0.11682566399610211 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTAT 631 0.11645654657431348 No Hit GGAGCTGGGGTCTCTTATTGGAAATATTTAAATGCATTACTTTTCTACTAT 621 0.11461095946537032 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCATCCCACTTCGT 616 0.11368816591089874 No Hit GCCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTG 606 0.11184257880195558 No Hit CGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTG 587 0.10833596329496357 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCATCCCACT 560 0.10335287810081704 No Hit AGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTG 543 0.10021538001561367 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.43832693837400083 0.0 2 0.0 0.0 0.0 2.870810747961088 0.0 3 0.0 0.0 0.0 3.6418970420775403 0.0 4 0.0 0.0 0.0 4.9670285862987305 0.0 5 0.0 0.0 0.0 9.700959520737939 0.0 6 0.0 0.0 0.0 11.010034457111324 0.0 7 0.0 0.0 0.0 12.874815671987495 0.0 8 0.0 0.0 0.0 15.181614999455551 0.0 9 0.0 0.0 0.0 15.85285503097818 0.0 10 0.0 0.0 0.0 19.98346353950387 0.0 11 0.0 0.0 0.0 22.106073273499398 0.0 12 0.0 0.0 0.0 27.019395274927884 0.0 13 0.0 0.0 0.0 27.896418269097673 0.0 14 0.0 0.0 0.0 28.28233053357769 0.0 15 0.0 0.0 0.0 29.261968171004717 0.0 16 0.0 0.0 0.0 30.386299837772892 0.0 17 0.0 0.0 0.0 31.690576247663024 0.0 18 0.0 0.0 0.0 33.065723202536574 0.0 19 0.0 0.0 0.0 34.38771724867256 0.0 20 0.0 0.0 0.0 35.25071378081439 0.0 21 1.8455871089431616E-4 0.0 0.0 36.12220001365734 0.0 22 1.8455871089431616E-4 0.0 0.0 37.09482442007039 0.0 23 1.8455871089431616E-4 0.0 0.0 37.9939944595475 0.0 24 1.8455871089431616E-4 0.0 0.0 38.71100505137192 0.0 25 1.8455871089431616E-4 0.0 0.0 39.307498804982345 0.0 26 3.691174217886323E-4 0.0 0.0 39.89476462304806 0.0 27 3.691174217886323E-4 0.0 0.0 40.51894218329264 0.0 28 3.691174217886323E-4 0.0 0.0 41.05120950551185 0.0 29 3.691174217886323E-4 0.0 0.0 41.6176201892465 0.0 30 3.691174217886323E-4 0.0 0.0 42.30565506346051 0.0 31 3.691174217886323E-4 0.0 0.0 42.8903370595737 0.0 32 5.536761326829484E-4 0.0 0.0 43.47243523373438 0.0 33 5.536761326829484E-4 0.0 0.0 44.00544079079717 0.0 34 5.536761326829484E-4 0.0 0.0 44.53733899559458 0.0 35 5.536761326829484E-4 0.0 0.0 45.09655188960436 0.0 36 5.536761326829484E-4 0.0 0.0 45.64284567385154 0.0 37 5.536761326829484E-4 0.0 0.0 46.14466080877318 0.0 38 5.536761326829484E-4 0.0 0.0 46.673790632907185 0.0 39 5.536761326829484E-4 0.0 0.0 47.191662375676636 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACA 45 3.8380676E-10 45.000004 10 GGTCGAC 45 3.8380676E-10 45.000004 9 GCTCGGA 75 0.0 45.000004 1 AGCCGTC 20 7.0299825E-4 45.0 20 CGGCGAA 25 3.888066E-5 45.0 31 GTCGCAC 20 7.0299825E-4 45.0 31 ACCGGGT 25 3.888066E-5 45.0 4 TTGTGCG 25 3.888066E-5 45.0 1 CTATCGC 20 7.0299825E-4 45.0 28 TTAGCGA 20 7.0299825E-4 45.0 1 AGCCCGA 25 3.888066E-5 45.0 14 GTTTACG 20 7.0299825E-4 45.0 1 TTTCGCG 25 3.888066E-5 45.0 1 TAGCGTG 20 7.0299825E-4 45.0 13 GATCCGT 135 0.0 45.0 43 GTCTCGC 20 7.0299825E-4 45.0 31 TTCACGG 20 7.0299825E-4 45.0 2 TCCCTCG 20 7.0299825E-4 45.0 31 CGCGCAC 20 7.0299825E-4 45.0 25 CACGACT 25 3.888066E-5 45.0 12 >>END_MODULE