##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936454.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 878355 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.994457821723564 33.0 31.0 34.0 30.0 34.0 2 32.03660934360253 33.0 31.0 34.0 30.0 34.0 3 32.067818820408604 33.0 31.0 34.0 30.0 34.0 4 35.737642524947205 37.0 35.0 37.0 33.0 37.0 5 34.745026783020535 37.0 35.0 37.0 33.0 37.0 6 35.26737139311554 37.0 35.0 37.0 33.0 37.0 7 35.87295569559005 37.0 35.0 37.0 35.0 37.0 8 35.87599660729432 37.0 35.0 37.0 35.0 37.0 9 37.713410864627626 39.0 38.0 39.0 35.0 39.0 10 37.36689151880504 39.0 37.0 39.0 34.0 39.0 11 37.270349687768615 39.0 37.0 39.0 34.0 39.0 12 37.07505735152643 39.0 37.0 39.0 34.0 39.0 13 36.928153195461974 39.0 36.0 39.0 33.0 39.0 14 37.77512850726642 40.0 37.0 41.0 33.0 41.0 15 37.9073347336783 40.0 36.0 41.0 33.0 41.0 16 38.00096999504756 40.0 36.0 41.0 33.0 41.0 17 38.049234079614735 40.0 36.0 41.0 33.0 41.0 18 38.02686840742069 40.0 36.0 41.0 33.0 41.0 19 37.97416648166174 40.0 36.0 41.0 34.0 41.0 20 37.9628202719857 40.0 36.0 41.0 33.0 41.0 21 37.82871845666046 40.0 36.0 41.0 33.0 41.0 22 37.90113564561026 40.0 36.0 41.0 34.0 41.0 23 37.945071184202284 40.0 36.0 41.0 34.0 41.0 24 37.90286046074765 40.0 36.0 41.0 34.0 41.0 25 37.749438438899986 40.0 35.0 41.0 33.0 41.0 26 37.80961228660394 40.0 35.0 41.0 34.0 41.0 27 37.774579754199614 40.0 35.0 41.0 34.0 41.0 28 37.704657000870945 40.0 35.0 41.0 33.0 41.0 29 37.67481257578086 40.0 35.0 41.0 33.0 41.0 30 37.53960983884648 40.0 35.0 41.0 33.0 41.0 31 37.49379123475133 40.0 35.0 41.0 33.0 41.0 32 37.449741846975314 40.0 35.0 41.0 33.0 41.0 33 37.316237739866 39.0 35.0 41.0 33.0 41.0 34 37.169368877048576 39.0 35.0 41.0 32.0 41.0 35 37.124623870758406 39.0 35.0 41.0 32.0 41.0 36 37.067766449783974 39.0 35.0 41.0 32.0 41.0 37 37.0049068998298 39.0 35.0 41.0 32.0 41.0 38 36.91039272276016 39.0 35.0 41.0 32.0 41.0 39 36.872468421082594 39.0 35.0 41.0 31.0 41.0 40 36.72541170711159 39.0 35.0 41.0 31.0 41.0 41 36.60821080314907 39.0 35.0 41.0 31.0 41.0 42 36.62170534692692 39.0 35.0 41.0 31.0 41.0 43 36.50959463998042 39.0 35.0 41.0 31.0 41.0 44 36.382841789481475 38.0 35.0 41.0 31.0 41.0 45 36.3496957380558 38.0 35.0 40.0 31.0 41.0 46 36.25120253200585 38.0 35.0 40.0 31.0 41.0 47 36.14561879877726 38.0 35.0 40.0 30.0 41.0 48 36.100541352869854 38.0 35.0 40.0 30.0 41.0 49 36.08528670070757 38.0 35.0 40.0 30.0 41.0 50 35.95335598932095 38.0 35.0 40.0 30.0 41.0 51 34.736703269179316 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 13.0 10 25.0 11 18.0 12 19.0 13 24.0 14 29.0 15 37.0 16 65.0 17 121.0 18 217.0 19 367.0 20 658.0 21 967.0 22 1521.0 23 2257.0 24 3180.0 25 4707.0 26 6114.0 27 7505.0 28 9251.0 29 10824.0 30 13547.0 31 17774.0 32 23769.0 33 34761.0 34 64698.0 35 77004.0 36 67133.0 37 100501.0 38 166374.0 39 264695.0 40 172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.13831537362456 21.281827962498078 25.77306442156076 10.806792242316602 2 32.13575376698488 23.710914152022816 25.54001514194147 18.61331693905084 3 31.761076102487035 23.47581558709178 27.356365023253698 17.40674328716749 4 29.5965754165457 25.30810435416204 25.721946137951058 19.3733740913412 5 24.343687916616858 30.876923339651963 25.503811101433932 19.275577642297247 6 25.760541011322303 33.53461869062053 25.0454542867064 15.659386011350765 7 79.16263925178316 6.036397584120316 9.11339947970923 5.6875636843872925 8 79.45227157584348 5.061051624912478 9.201177200562414 6.285499598681627 9 73.47370937718803 7.2135981465352845 11.928775950498375 7.383916525778302 10 43.10330105708967 23.167739695225734 18.11192513277661 15.617034114907982 11 31.9253604749788 23.125387798782953 23.529324703565187 21.419927022673065 12 29.437300408149326 20.54203596495722 29.55934673338229 20.461316893511167 13 27.257999328289817 22.821068929988446 30.750778443795507 19.170153297926237 14 21.556204495904275 26.687614916520086 30.515452180496496 21.240728407079143 15 19.03660820511069 24.52561891262644 35.75205924711535 20.685713635147522 16 24.296326656078694 24.47393138309681 30.101041150787548 21.128700810036943 17 25.213267983901726 24.036067421486756 26.31111566507847 24.439548929533046 18 25.100101895019666 23.674482413147306 30.82762664298604 20.39778904884699 19 25.757694781722652 25.689612969699038 27.153371928206703 21.399320320371604 20 26.644124528237445 26.250547899197933 27.62482139909262 19.480506173472 21 24.983178783066073 26.039129964535977 29.62355767315038 19.35413357924757 22 23.271228603468984 23.309026532552327 29.216205292848564 24.203539571130122 23 22.565022115203988 24.60542719060061 29.241024414957508 23.588526279237893 24 23.83239123133585 23.901042289279392 28.41425164085136 23.852314838533395 25 22.722475536656592 25.044998889970454 27.150639547791037 25.081886025581912 26 21.116518947350446 25.235582423962978 26.62021619960039 27.02768242908619 27 20.72613009546254 26.320678996533292 29.383222045755986 23.56996886224818 28 18.355220838954637 25.16818370704328 29.772358556620045 26.70423689738204 29 20.283826015677032 25.620506515019553 29.076626193281758 25.019041276021653 30 22.29212562118961 25.070728805551283 28.542787369571528 24.094358203687573 31 22.51265149057044 24.621366076358647 28.727223047628808 24.138759385442103 32 23.567008783464544 24.74625863119126 27.304563644540075 24.382168940804117 33 24.24885154635654 24.503532170933166 26.730536058882798 24.517080223827495 34 19.983150320770076 22.808887067301946 31.945739478912284 25.262223133015695 35 19.874879746799415 25.580431602256493 28.358010143962293 26.186678506981803 36 24.59153759015432 25.029515400948366 26.595738625043403 23.78320838385391 37 21.737566245993932 25.895566143529663 30.467180126486443 21.899687483989958 38 20.755730883298895 26.691258090407636 27.785348748512845 24.767662277780627 39 22.20958496279978 23.00641540151761 29.1810258949969 25.602973740685712 40 22.791354292968105 21.60846127135384 29.99447831457668 25.605706121101377 41 20.45983685411935 22.907822008185757 27.64838818017772 28.98395295751718 42 22.48828776519744 23.08724832214765 28.648439412310513 25.77602450034439 43 22.601681552447474 22.47929367966255 29.47509833723267 25.44392643065731 44 20.969539650824554 22.744220730797913 29.77509093703571 26.51114868134183 45 21.195074884300766 22.72190629073666 27.701555749099168 28.381463075863405 46 22.215049723631104 23.109562762208903 28.678040200146864 25.997347314013126 47 18.952815205697014 24.08741340346443 31.731930711386624 25.22784067945193 48 20.592015756727065 23.31403589664771 29.940741499735303 26.153206846889926 49 22.699478001491425 21.20543516004349 31.51504801589335 24.58003882257174 50 20.55706405724337 22.470071895759688 30.48710373368399 26.485760313312955 51 20.189558891336645 22.177137945363775 27.55343796073342 30.079865202566157 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 441.0 1 791.5 2 1142.0 3 2016.5 4 2891.0 5 2047.0 6 1203.0 7 1198.5 8 1194.0 9 1271.5 10 1349.0 11 1432.5 12 1516.0 13 1579.0 14 1642.0 15 1596.5 16 1551.0 17 1568.0 18 1585.0 19 1534.5 20 1484.0 21 1686.5 22 1889.0 23 2050.5 24 2212.0 25 3002.5 26 4489.5 27 5186.0 28 7191.5 29 9197.0 30 9577.0 31 9957.0 32 11827.5 33 13698.0 34 16100.0 35 18502.0 36 19807.0 37 21112.0 38 25015.5 39 28919.0 40 32765.0 41 36611.0 42 40464.5 43 44318.0 44 50303.5 45 56289.0 46 67066.0 47 77843.0 48 88037.5 49 98232.0 50 96482.5 51 94733.0 52 80983.5 53 67234.0 54 59929.5 55 52625.0 56 49598.0 57 46571.0 58 44799.5 59 43028.0 60 39947.5 61 36867.0 62 33784.0 63 30701.0 64 27285.0 65 23869.0 66 19825.5 67 15782.0 68 12776.0 69 9770.0 70 7911.0 71 6052.0 72 4761.0 73 3470.0 74 2921.0 75 1579.5 76 787.0 77 616.0 78 445.0 79 301.5 80 158.0 81 106.5 82 55.0 83 49.5 84 44.0 85 27.5 86 11.0 87 8.5 88 6.0 89 6.0 90 6.0 91 5.5 92 5.0 93 5.0 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 878355.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.9273234341539 #Duplication Level Percentage of deduplicated Percentage of total 1 70.2756068261713 20.32885208192091 2 12.519652342995741 7.243200652180009 3 4.85165544909375 4.2103621910103035 4 2.4576668427779507 2.8437489461773455 5 1.3970473146123599 2.0206419761303946 6 0.9283727114768929 1.6113202615400717 7 0.6817315369235029 1.38044680646943 8 0.5001929663486389 1.1575394973644748 9 0.39800463379629886 1.0361887893105766 >10 5.0652369027163235 36.82225802390383 >50 0.8478952957285318 15.228289773554266 >100 0.06979867636661927 3.596387358177497 >500 0.004362417272913702 0.8515736820871974 >1k 0.0027760837191269016 1.669189960173612 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 4209 0.47919121539696363 No Hit CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 2915 0.33187037131911357 No Hit CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT 2304 0.2623085199036836 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1489 0.16952143495511496 No Hit TCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 1476 0.1680413955632973 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1144 0.130243466479954 No Hit ACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 1013 0.11532922337779143 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCC 936 0.10656283621087147 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4154755195792136E-4 0.0 0.0 0.2804105401574534 0.0 2 3.4154755195792136E-4 0.0 0.0 1.441216820078442 0.0 3 3.4154755195792136E-4 0.0 0.0 1.983594332587621 0.0 4 3.4154755195792136E-4 0.0 0.0 2.6524582885052173 0.0 5 3.4154755195792136E-4 0.0 0.0 4.384673622851809 0.0 6 3.4154755195792136E-4 0.0 0.0 5.278275867957716 0.0 7 3.4154755195792136E-4 0.0 0.0 6.207626756835221 0.0 8 3.4154755195792136E-4 0.0 0.0 7.699164916235463 0.0 9 3.4154755195792136E-4 0.0 0.0 8.227425129930381 0.0 10 3.4154755195792136E-4 0.0 0.0 9.449254572467852 0.0 11 3.4154755195792136E-4 0.0 0.0 11.22792037388072 0.0 12 3.4154755195792136E-4 0.0 0.0 12.681205207461675 0.0 13 4.5539673594389513E-4 0.0 0.0 13.22938902835414 0.0 14 5.69245919929869E-4 0.0 0.0 13.455151960198325 0.0 15 5.69245919929869E-4 0.0 0.0 13.90349004673509 0.0 16 5.69245919929869E-4 0.0 0.0 14.775347097699678 0.0 17 5.69245919929869E-4 0.0 0.0 15.828793597121892 0.0 18 5.69245919929869E-4 0.0 0.0 17.078516089735928 0.0 19 5.69245919929869E-4 0.0 0.0 17.789162696176376 0.0 20 5.69245919929869E-4 0.0 0.0 18.51996060818234 0.0 21 5.69245919929869E-4 0.0 0.0 19.367340084589944 0.0 22 5.69245919929869E-4 0.0 0.0 20.24090487331432 0.0 23 5.69245919929869E-4 0.0 0.0 21.063237529245008 0.0 24 5.69245919929869E-4 0.0 0.0 21.77012711261392 0.0 25 5.69245919929869E-4 0.0 0.0 22.38514040450615 0.0 26 5.69245919929869E-4 0.0 0.0 22.950287753812525 0.0 27 5.69245919929869E-4 0.0 0.0 23.571562750823983 0.0 28 5.69245919929869E-4 0.0 0.0 24.127488316227492 0.0 29 5.69245919929869E-4 0.0 0.0 24.744209345879515 0.0 30 5.69245919929869E-4 0.0 0.0 25.475918051357368 0.0 31 5.69245919929869E-4 0.0 0.0 26.038788416984023 0.0 32 5.69245919929869E-4 0.0 0.0 26.623973222671925 0.0 33 5.69245919929869E-4 0.0 0.0 27.204490211816406 0.0 34 5.69245919929869E-4 0.0 0.0 27.818251162684792 0.0 35 6.830951039158427E-4 0.0 0.0 28.47015159018848 0.0 36 6.830951039158427E-4 0.0 0.0 29.01719691924108 0.0 37 7.969442879018165E-4 0.0 0.0 29.59179375081829 0.0 38 7.969442879018165E-4 0.0 0.0 30.21648422334933 0.0 39 7.969442879018165E-4 0.0 0.0 31.166214116160322 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 20 7.0323766E-4 45.000004 1 GCCCAAT 20 7.0323766E-4 45.000004 45 ATTGTCG 40 6.8121153E-9 45.000004 1 AAGCGTA 20 7.0323766E-4 45.000004 32 AGGCGAA 20 7.0323766E-4 45.000004 11 ATCCCGC 20 7.0323766E-4 45.000004 23 ACTACGC 20 7.0323766E-4 45.000004 45 TTACGTT 20 7.0323766E-4 45.000004 24 CCGAATC 20 7.0323766E-4 45.000004 25 CGCATCG 25 3.8900525E-5 45.0 21 GCGTTTA 25 3.8900525E-5 45.0 32 CGAATCG 25 3.8900525E-5 45.0 36 GCGATAT 70 0.0 41.785713 9 CGGTCTA 70 0.0 41.785713 31 GTCGGTA 70 0.0 41.785713 10 CGTATGG 135 0.0 41.666664 2 ATAACGC 60 3.6379788E-12 41.249996 11 GCTACGA 55 6.002665E-11 40.909092 10 AACGGGC 155 0.0 40.645164 4 TTACGGG 155 0.0 40.645164 3 >>END_MODULE