##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936452.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 853603 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.981669464610597 33.0 31.0 34.0 30.0 34.0 2 32.03332345364297 33.0 31.0 34.0 30.0 34.0 3 32.05946441144185 33.0 31.0 34.0 30.0 34.0 4 35.722626326289856 37.0 35.0 37.0 33.0 37.0 5 34.80068954771715 37.0 35.0 37.0 33.0 37.0 6 35.28052150707062 37.0 35.0 37.0 33.0 37.0 7 35.85355370119365 37.0 35.0 37.0 35.0 37.0 8 35.82919928819369 37.0 35.0 37.0 35.0 37.0 9 37.71361042545539 39.0 38.0 39.0 35.0 39.0 10 37.274645239063126 39.0 37.0 39.0 34.0 39.0 11 37.23683023606993 39.0 37.0 39.0 34.0 39.0 12 37.21839426524977 39.0 37.0 39.0 34.0 39.0 13 37.164222712431894 39.0 37.0 39.0 33.0 39.0 14 38.291107224318566 40.0 38.0 41.0 34.0 41.0 15 38.33606254898354 40.0 38.0 41.0 34.0 41.0 16 38.40549646615581 40.0 38.0 41.0 34.0 41.0 17 38.35981715153297 40.0 38.0 41.0 34.0 41.0 18 38.34358243820605 40.0 37.0 41.0 34.0 41.0 19 38.27003771073907 40.0 37.0 41.0 34.0 41.0 20 38.24224141667731 40.0 37.0 41.0 34.0 41.0 21 38.223294669770375 40.0 37.0 41.0 34.0 41.0 22 38.27252715840971 40.0 37.0 41.0 34.0 41.0 23 38.275096268405804 40.0 37.0 41.0 34.0 41.0 24 38.23756359806608 40.0 37.0 41.0 34.0 41.0 25 38.112541778789435 40.0 37.0 41.0 34.0 41.0 26 38.13871671022712 40.0 37.0 41.0 34.0 41.0 27 38.109911750544455 40.0 37.0 41.0 34.0 41.0 28 38.0024074423356 40.0 37.0 41.0 34.0 41.0 29 37.96231503403807 40.0 37.0 41.0 34.0 41.0 30 37.83593661221903 40.0 36.0 41.0 33.0 41.0 31 37.81380220078889 40.0 37.0 41.0 33.0 41.0 32 37.74302573913166 40.0 37.0 41.0 33.0 41.0 33 37.60794537976085 40.0 36.0 41.0 33.0 41.0 34 37.560938750215264 40.0 36.0 41.0 33.0 41.0 35 37.49952964082835 40.0 36.0 41.0 33.0 41.0 36 37.47989522061192 40.0 36.0 41.0 33.0 41.0 37 37.40497046050682 40.0 36.0 41.0 32.0 41.0 38 37.35624874795426 40.0 36.0 41.0 32.0 41.0 39 37.31813969725973 40.0 36.0 41.0 32.0 41.0 40 37.20264104038997 40.0 36.0 41.0 32.0 41.0 41 37.183236235111636 40.0 36.0 41.0 32.0 41.0 42 37.20233410613599 40.0 36.0 41.0 32.0 41.0 43 37.10449705542272 39.0 36.0 41.0 32.0 41.0 44 37.00945638663407 39.0 35.0 41.0 31.0 41.0 45 36.96477636559384 39.0 35.0 41.0 31.0 41.0 46 36.83748651305115 39.0 35.0 41.0 31.0 41.0 47 36.694380174390204 39.0 35.0 41.0 31.0 41.0 48 36.69116907977128 39.0 35.0 41.0 31.0 41.0 49 36.71294618224163 39.0 35.0 41.0 31.0 41.0 50 36.58720505902627 39.0 35.0 41.0 31.0 41.0 51 35.372952063195655 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 14.0 10 19.0 11 19.0 12 6.0 13 7.0 14 14.0 15 21.0 16 28.0 17 61.0 18 149.0 19 257.0 20 617.0 21 1042.0 22 1643.0 23 2279.0 24 3149.0 25 4269.0 26 5410.0 27 6582.0 28 7534.0 29 9122.0 30 11548.0 31 14833.0 32 19991.0 33 27832.0 34 46328.0 35 63888.0 36 61189.0 37 93655.0 38 175705.0 39 296206.0 40 178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.44654365085409 21.51632550494785 24.63170818284378 10.405422661354283 2 30.54440998918701 28.32909443851533 24.328288443222434 16.798207129075227 3 29.961000605667977 27.59666964619384 26.543721144372732 15.898608603765451 4 26.553093182662195 26.03458516429769 30.08061124433724 17.331710408702875 5 27.052037071097455 30.25422825364953 24.50916878220906 18.184565893043956 6 24.235153812720903 36.48007328933942 24.948951678942084 14.33582121899759 7 77.50839676055496 6.12450987168508 11.890656429276842 4.476436938483112 8 78.35094300277764 7.790038226201173 8.6438309143712 5.215187856649988 9 72.59815159974836 7.223147060167315 10.40214244795297 9.776558892131353 10 38.052232712396744 27.1689532487585 19.586857122104774 15.191956916739983 11 27.84866032570176 25.812233555880194 26.322892492177274 20.01621362624077 12 23.361796994621624 22.554981648377527 31.329083894972253 22.754137462028602 13 22.893429381105737 25.158651035668804 33.89233636714023 18.055583216085232 14 20.413939501149834 29.672810428267006 29.62044416432463 20.29280590625853 15 18.501340787227786 26.745102817117562 35.5865665889178 19.166989806736858 16 20.85676831032693 26.448360654777453 29.886024299352275 22.80884673554334 17 21.821033899833996 26.720501216607722 28.88766792056729 22.57079696299099 18 21.36566998944474 26.49838390914746 30.80682706129196 21.329119040115838 19 21.184438199022264 28.3135134248591 28.47002646429312 22.03202191182552 20 21.78893466869259 27.701870775993054 31.20033551897076 19.30885903634359 21 22.036590780491633 29.04160364947171 29.908634341725605 19.013171228311055 22 19.74360446249603 26.030016295631576 30.166716846121677 24.059662395750717 23 19.177884801248354 27.78797637777749 29.70725266898078 23.326886151993374 24 21.2840161058478 25.825237259006823 28.886496415781103 24.00425021936427 25 18.894849244906588 30.21310843565451 28.024034592193324 22.86800772724557 26 20.079006282780167 27.346787675301048 29.921520894373614 22.65268514754517 27 20.74078933649483 29.148327735492963 28.450696635321105 21.6601862926911 28 18.31788313771156 27.391304857175996 30.948930591855934 23.341881413256512 29 21.758006942337364 26.124908183312385 29.07007121577595 23.047013658574304 30 20.083926602882133 29.203622761400794 29.60158293726709 21.11086769844998 31 20.68443995627944 27.837413879754408 26.344096728807187 25.134049435158968 32 21.26656068453368 31.210527610610555 25.749675200298032 21.77323650455774 33 19.239623103480188 27.39165630861185 27.52028753413472 25.84843305377324 34 20.561431953730246 25.949065314906345 27.873027625254366 25.616475106109043 35 19.089904791806028 29.74122630778008 26.753654802056694 24.4152140983572 36 21.052995362012553 26.91157364723414 26.66122307442687 25.37420791632644 37 18.305113735542168 30.590684428241232 28.180899083063203 22.9233027531534 38 17.836394670590426 28.926093277554088 27.429847364641407 25.80766468721408 39 19.48493620570687 27.35077079157407 28.577687754143323 24.586605248575744 40 20.259769471288173 26.629592445199933 30.043240241658008 23.067397841853882 41 18.758486087794914 26.73432497308468 26.28399853327601 28.2231904058444 42 20.086035311497266 26.893415323048302 28.37548602804817 24.645063337406263 43 21.3493860729168 26.042434246365115 26.989361565036674 25.618818115681414 44 20.10770815004165 25.847613000422914 28.451399538192813 25.593279311342627 45 19.55030617277587 25.42821428696947 27.99861293833316 27.022866601921503 46 22.94860725653495 26.830388365551666 27.05894894933593 23.162055428577453 47 17.91265963217093 26.090583093077225 31.730675735675717 24.26608153907613 48 19.243137617838737 26.166496603221873 28.099713801380737 26.490651977558656 49 19.67835164590565 23.940754659953164 31.48020801238983 24.90068568175135 50 19.848454140859392 23.804508653320102 29.944130936746944 26.40290626907356 51 19.104197150197457 23.916738811836417 27.173756418381846 29.80530761958428 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 284.0 1 562.0 2 840.0 3 1878.0 4 2916.0 5 2096.0 6 1276.0 7 1256.5 8 1237.0 9 1230.5 10 1224.0 11 1330.0 12 1436.0 13 1428.5 14 1421.0 15 1438.0 16 1455.0 17 1505.5 18 1556.0 19 1770.5 20 1985.0 21 2133.5 22 2282.0 23 2939.5 24 3597.0 25 4138.5 26 6276.0 27 7872.0 28 9303.0 29 10734.0 30 12023.0 31 13312.0 32 16437.0 33 19562.0 34 21686.0 35 23810.0 36 27316.0 37 30822.0 38 32617.0 39 34412.0 40 39020.5 41 43629.0 42 48821.0 43 54013.0 44 60671.5 45 67330.0 46 90883.0 47 114436.0 48 107290.5 49 100145.0 50 96774.5 51 93404.0 52 78169.5 53 62935.0 54 53425.5 55 43916.0 56 37709.5 57 31503.0 58 28367.0 59 25231.0 60 21520.5 61 17810.0 62 15268.0 63 12726.0 64 10506.0 65 8286.0 66 6757.5 67 5229.0 68 3974.5 69 2720.0 70 2222.5 71 1725.0 72 1308.5 73 892.0 74 704.5 75 364.0 76 211.0 77 165.5 78 120.0 79 94.5 80 69.0 81 45.5 82 22.0 83 15.5 84 9.0 85 7.5 86 6.0 87 4.5 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 853603.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.583364971990775 #Duplication Level Percentage of deduplicated Percentage of total 1 71.48605104502016 22.57770040561234 2 12.210676311802054 7.713084930209729 3 4.582533270769298 4.341954623609921 4 2.2238137372186513 2.809420835692138 5 1.3059547412591552 2.062322261504484 6 0.9025065440427043 1.7102516142066477 7 0.6427881649415518 1.4210989249117665 8 0.49970588278721473 1.2625914619775556 9 0.42213423906772346 1.1999177765684568 >10 5.297202285147935 39.26437090920928 >50 0.3680835157583455 7.137614185371323 >100 0.05146456166603009 2.8543859453137634 >500 0.0014917264251023165 0.3855081785512886 >1k 0.004475179275306949 2.409867807259201 >5k 0.0011187948188267373 2.8499101400021325 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGC 9046 1.0597432295809646 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCG 8152 0.9550107016962218 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTC 6998 0.8198190493707261 No Hit GCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGC 4360 0.5107760867757025 No Hit CCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGC 3302 0.38683088039756186 No Hit CTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGCT 1746 0.20454473566751757 TruSeq Adapter, Index 13 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCT 1599 0.18732361531063035 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1438 0.1684623882530872 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACATCACT 1335 0.15639588895540432 No Hit GAACTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCT 1231 0.14421223917910317 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACATCACTCGTA 1138 0.13331724466760309 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTT 1124 0.13167713796694716 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTC 1078 0.12628821595050627 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCC 1070 0.12535101212156002 No Hit GTAGCAGGGAAGGACTTTTTTTTTATTTCTTCCCAAATAAGTGTTGACAGC 1039 0.12171934728439333 No Hit TCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTGC 1000 0.1171504786182804 No Hit CGCTGTCTCTTATACACATCTGACGCGACATCACTCGTATGCCGTCTTCTG 987 0.11562752239624274 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5145143585484117E-4 0.0 0.0 0.2152054292217811 0.0 2 3.5145143585484117E-4 0.0 0.0 1.382141346738472 0.0 3 3.5145143585484117E-4 0.0 0.0 1.8794451284730724 0.0 4 3.5145143585484117E-4 0.0 0.0 2.580004990610389 0.0 5 3.5145143585484117E-4 0.0 0.0 4.814767520732706 0.0 6 3.5145143585484117E-4 0.0 0.0 5.779267411197009 0.0 7 3.5145143585484117E-4 0.0 0.0 6.795196361774736 0.0 8 3.5145143585484117E-4 0.0 0.0 8.251728262435817 0.0 9 4.686019144731216E-4 0.0 0.0 8.706154968996126 0.0 10 4.686019144731216E-4 0.0 0.0 10.790496284572571 0.0 11 4.686019144731216E-4 0.0 0.0 12.4575475953107 0.0 12 4.686019144731216E-4 0.0 0.0 14.840271179927905 0.0 13 4.686019144731216E-4 0.0 0.0 15.425086369190362 0.0 14 5.85752393091402E-4 0.0 0.0 15.672156728596315 0.0 15 5.85752393091402E-4 0.0 0.0 16.194179261319373 0.0 16 5.85752393091402E-4 0.0 0.0 17.06777038037589 0.0 17 5.85752393091402E-4 0.0 0.0 18.1572698315259 0.0 18 5.85752393091402E-4 0.0 0.0 19.317059569846872 0.0 19 5.85752393091402E-4 0.0 0.0 20.183387359229055 0.0 20 5.85752393091402E-4 0.0 0.0 20.893436410134452 0.0 21 5.85752393091402E-4 0.0 0.0 21.744183185860408 0.0 22 5.85752393091402E-4 0.0 0.0 22.673537932739226 0.0 23 5.85752393091402E-4 0.0 0.0 23.58742881644043 0.0 24 5.85752393091402E-4 0.0 0.0 24.33250586045269 0.0 25 5.85752393091402E-4 0.0 0.0 24.998154879961763 0.0 26 5.85752393091402E-4 0.0 0.0 25.62444133865509 0.0 27 5.85752393091402E-4 0.0 0.0 26.30016529932533 0.0 28 5.85752393091402E-4 0.0 0.0 26.93992406305976 0.0 29 5.85752393091402E-4 0.0 0.0 27.61717097995204 0.0 30 5.85752393091402E-4 0.0 0.0 28.36306807731463 0.0 31 8.200533503279628E-4 0.0 0.0 29.044063809522694 0.0 32 8.200533503279628E-4 0.0 0.0 29.704206756536703 0.0 33 8.200533503279628E-4 0.0 0.0 30.344316971706988 0.0 34 9.372038289462432E-4 0.0 0.0 30.98513008974898 0.0 35 9.372038289462432E-4 0.0 0.0 31.621842941039336 0.0 36 9.372038289462432E-4 0.0 0.0 32.24028031766524 0.0 37 9.372038289462432E-4 0.0 0.0 32.89023117303946 0.0 38 9.372038289462432E-4 0.0 0.0 33.50714559344332 0.0 39 9.372038289462432E-4 0.0 0.0 34.13846952271724 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGCG 30 2.164843E-6 45.000004 1 ATCTCGC 40 6.8121153E-9 45.0 31 CATCTCG 25 3.889959E-5 45.0 30 CCGCTAT 20 7.032265E-4 45.0 43 CGTTCCT 20 7.032265E-4 45.0 29 TTATCCG 20 7.032265E-4 45.0 39 GTTCGGT 20 7.032265E-4 45.0 14 TCTCGCG 20 7.032265E-4 45.0 31 CGAATTG 20 7.032265E-4 45.0 14 ACGTCGT 20 7.032265E-4 45.0 39 TGTCGTC 20 7.032265E-4 45.0 17 TATCGAG 20 7.032265E-4 45.0 1 GCCCGTA 25 3.889959E-5 45.0 28 TCGAACG 25 3.889959E-5 45.0 1 TACGTAG 25 3.889959E-5 45.0 1 CCCGATA 25 3.889959E-5 45.0 11 ACGGTAA 20 7.032265E-4 45.0 11 CGTAAGG 155 0.0 42.09677 2 CGAACGG 70 0.0 41.785713 2 TTAGCGG 130 0.0 41.538464 2 >>END_MODULE