##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936451.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 480426 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00359680783305 33.0 31.0 34.0 30.0 34.0 2 32.02752557105569 33.0 31.0 34.0 30.0 34.0 3 32.08998264040664 33.0 31.0 34.0 30.0 34.0 4 35.7755450371129 37.0 35.0 37.0 35.0 37.0 5 34.741506496317854 37.0 35.0 37.0 33.0 37.0 6 35.26205700773897 37.0 35.0 37.0 33.0 37.0 7 35.810041504831126 37.0 35.0 37.0 35.0 37.0 8 35.744351887699665 37.0 35.0 37.0 35.0 37.0 9 37.6173458555532 39.0 37.0 39.0 35.0 39.0 10 37.37114768975867 39.0 37.0 39.0 34.0 39.0 11 37.29624125255502 39.0 37.0 39.0 34.0 39.0 12 37.11048735913543 39.0 37.0 39.0 34.0 39.0 13 36.915778912881485 39.0 35.0 39.0 33.0 39.0 14 37.99876151582138 40.0 37.0 41.0 33.0 41.0 15 38.06682818998139 40.0 37.0 41.0 33.0 41.0 16 38.186430376374304 40.0 37.0 41.0 34.0 41.0 17 38.14066890634562 40.0 36.0 41.0 34.0 41.0 18 38.155255960335204 40.0 37.0 41.0 34.0 41.0 19 38.079414935911046 40.0 36.0 41.0 34.0 41.0 20 38.006077939162324 40.0 36.0 41.0 34.0 41.0 21 37.99692148218456 40.0 36.0 41.0 34.0 41.0 22 38.02745271904518 40.0 36.0 41.0 34.0 41.0 23 38.014093741804146 40.0 36.0 41.0 34.0 41.0 24 37.966854416705175 40.0 36.0 41.0 34.0 41.0 25 37.856304612989305 40.0 36.0 41.0 34.0 41.0 26 37.82072160957151 40.0 36.0 41.0 34.0 41.0 27 37.80642180065192 40.0 36.0 41.0 34.0 41.0 28 37.70184378031164 40.0 36.0 41.0 33.0 41.0 29 37.61487305016798 40.0 36.0 41.0 33.0 41.0 30 37.565085986187256 40.0 36.0 41.0 33.0 41.0 31 37.486237214472155 40.0 35.0 41.0 33.0 41.0 32 37.281418990645804 39.0 35.0 41.0 33.0 41.0 33 37.19230224842119 39.0 35.0 41.0 33.0 41.0 34 37.1182658723716 39.0 35.0 41.0 32.0 41.0 35 37.06406813952617 39.0 35.0 41.0 32.0 41.0 36 37.03954407130338 39.0 35.0 41.0 32.0 41.0 37 36.91905100889627 39.0 35.0 41.0 32.0 41.0 38 36.821722804344475 39.0 35.0 41.0 31.0 41.0 39 36.71973415260623 39.0 35.0 41.0 31.0 41.0 40 36.61038536632072 39.0 35.0 41.0 31.0 41.0 41 36.579839559058 39.0 35.0 41.0 31.0 41.0 42 36.621207012110084 39.0 35.0 41.0 31.0 41.0 43 36.53127849033982 39.0 35.0 41.0 31.0 41.0 44 36.39604018100602 39.0 35.0 41.0 31.0 41.0 45 36.37922801846695 39.0 35.0 41.0 31.0 41.0 46 36.204949357445265 38.0 35.0 40.0 30.0 41.0 47 36.060042545574134 38.0 35.0 40.0 30.0 41.0 48 36.05076536240753 38.0 35.0 40.0 30.0 41.0 49 36.05128989688318 38.0 35.0 40.0 30.0 41.0 50 35.922400119893595 38.0 35.0 40.0 30.0 41.0 51 34.66632530296029 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 4.0 9 4.0 10 9.0 11 9.0 12 5.0 13 3.0 14 13.0 15 13.0 16 19.0 17 49.0 18 112.0 19 231.0 20 449.0 21 788.0 22 1069.0 23 1522.0 24 1924.0 25 2581.0 26 3360.0 27 4207.0 28 4826.0 29 5789.0 30 7355.0 31 9515.0 32 12910.0 33 17769.0 34 32486.0 35 46355.0 36 35011.0 37 52582.0 38 93101.0 39 146259.0 40 96.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.15112421059643 20.506383917606456 22.96815742695025 10.374334444846864 2 30.55184357216304 29.495905717009485 22.635119664630974 17.3171310461965 3 30.483570830887587 28.511362832153132 24.59296540986541 16.41210092709387 4 28.714307718566438 23.865277899197796 28.88041030252318 18.54000407971259 5 27.645880947325914 30.127220425205962 22.49420306144963 19.732695566018492 6 24.889785315532464 35.141728382726996 24.545299380133464 15.423186921607074 7 72.91341434476901 6.963195164291691 14.38181946855499 5.741571022384301 8 70.91060850162148 10.735472268361828 11.552039231848402 6.8018799981682925 9 64.87138497916433 9.16873774525109 13.229508810930298 12.730368464654285 10 40.7455050309517 24.004321164966093 20.425414111642585 14.824759692439626 11 33.22592865498537 23.598431392139478 24.417079841640543 18.758560111234612 12 29.39474549670501 20.793837136208282 29.244254057856985 20.567163309229723 13 24.396681278698487 26.32621881413579 31.166090095040648 18.111009812125072 14 19.188386973227928 31.312002264656787 28.323196496442744 21.17641426567255 15 16.537614533767947 25.688867796497277 37.99794349181768 19.7755741779171 16 18.65802433673448 25.73382789441038 31.61485847976587 23.99328928908927 17 18.826208406705717 24.74095906549604 29.67054239362566 26.762290134172588 18 20.59234929000512 25.240307560373505 30.75229067535895 23.415052474262428 19 22.04314504210846 27.407967095869086 27.59883936339832 22.950048498624138 20 24.97970551135867 25.697818186359605 30.33578532385841 18.986690978423315 21 22.311240440775478 29.04963511550166 28.60752748602282 20.03159695770004 22 20.0494977374247 25.35832781739539 28.654777218551867 25.937397226628033 23 20.599426342454404 28.02533584776844 28.359206204493514 23.016031605283644 24 22.496284547464125 24.16667707409674 29.70530321006773 23.631735168371403 25 18.900517457423206 29.932185185647736 26.98147061149896 24.1858267454301 26 18.472355784241486 28.63354606120401 28.95159712421892 23.942501030335578 27 22.837440105239935 28.289892720210812 27.31263503640519 21.560032138144063 28 17.66744514243609 28.040114398471356 31.916257654664822 22.37618280442774 29 20.60671154350514 26.641147648128953 30.43548850395274 22.316652304413168 30 23.010619741645954 27.71186405398542 29.070241827045162 20.207274377323458 31 27.764733798753603 27.233538567854364 23.521416409603145 21.48031122378889 32 24.534267504256636 30.194244274872716 25.397667903069358 19.873820317801286 33 22.75605400207316 28.683918022754806 24.548213460553757 24.011814514618276 34 23.2431217294651 27.64837873054331 27.50517249274602 21.603327047245568 35 21.785665222115373 28.081744118761264 26.349531457498138 23.78305920162522 36 24.908310541061475 29.295250465212124 24.360255273444817 21.436183720281583 37 24.315295175531716 26.478167293193955 29.8580842835317 19.34845324774263 38 21.878083201158972 29.57729182017626 24.884789749097678 23.65983522956709 39 23.64693001627722 25.240723857576402 28.510530237747332 22.601815888399045 40 22.74106730276879 28.231611111804938 27.265385303876144 21.761936281550124 41 21.480519372390336 27.13820650839047 25.43929762335927 25.941976495859926 42 22.12224151065929 26.087264219671706 27.801159804007273 23.989334465661724 43 24.19248750067648 24.3463093171477 26.24837123719366 25.212831944982163 44 22.5066919775366 25.298381020177924 28.13503016073235 24.059896841553122 45 21.831249765832826 25.04173379459063 27.021018845774375 26.105997593802165 46 24.717021976329338 27.397767814398055 25.947388359497616 21.93782184977499 47 20.745546660671987 25.289846927518493 31.853813074229954 22.110793337579565 48 22.148676383043384 24.90622905504698 27.559082980521453 25.386011581388185 49 21.241148480723357 22.570177300978713 32.006594147693924 24.182080070604005 50 21.528601699325183 22.66093009121072 30.191746491655323 25.61872171780878 51 20.04491846819281 23.990583357270424 26.286046134056022 29.678452040480742 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 350.0 1 585.0 2 820.0 3 1559.0 4 2298.0 5 1599.0 6 900.0 7 882.0 8 864.0 9 936.5 10 1009.0 11 1009.0 12 1009.0 13 977.5 14 946.0 15 1075.0 16 1204.0 17 1180.0 18 1156.0 19 1306.5 20 1457.0 21 1666.0 22 1875.0 23 2014.0 24 2153.0 25 2310.0 26 3429.0 27 4391.0 28 5114.0 29 5837.0 30 6448.5 31 7060.0 32 7974.5 33 8889.0 34 10407.5 35 11926.0 36 12703.0 37 13480.0 38 14551.5 39 15623.0 40 18965.0 41 22307.0 42 24347.0 43 26387.0 44 30275.5 45 34164.0 46 48586.0 47 63008.0 48 57969.0 49 52930.0 50 52083.0 51 51236.0 52 42277.5 53 33319.0 54 28983.5 55 24648.0 56 22036.0 57 19424.0 58 18296.5 59 17169.0 60 16486.5 61 15804.0 62 13598.0 63 11392.0 64 10017.0 65 8642.0 66 7047.0 67 5452.0 68 4429.5 69 3407.0 70 2812.5 71 2218.0 72 1763.0 73 1308.0 74 1076.0 75 652.0 76 460.0 77 356.0 78 252.0 79 217.5 80 183.0 81 153.5 82 124.0 83 70.0 84 16.0 85 9.5 86 3.0 87 6.0 88 9.0 89 6.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 480426.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.21870674825126 #Duplication Level Percentage of deduplicated Percentage of total 1 71.22355830699821 20.81060263739156 2 12.184312449739023 7.120197047959829 3 4.831078810113749 4.234736250912128 4 2.4164906966328914 2.8242693209917547 5 1.4397029039344131 2.1033128477332688 6 0.8831487742687667 1.5482679030261988 7 0.6581856225845059 1.34619328845483 8 0.4565803430488812 1.0672549720448976 9 0.33735994194268826 0.8871499091007431 >10 4.765882918922355 34.54766747111419 >50 0.7159840538968504 13.014028298741545 >100 0.07630507347307071 3.8968947794973245 >500 0.004991920694499953 1.0212106359916793 >1k 0.004991920694499953 3.1255171474954477 >5k 0.0014262630555714152 2.4526974895445948 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGC 6272 1.3055080282915579 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCG 5499 1.1446091593710583 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTC 4617 0.9610220928925578 No Hit GCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 3351 0.6975059634574315 TruSeq Adapter, Index 15 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 2026 0.421709066536782 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGCT 1635 0.3403229633700091 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1151 0.23957904026842844 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCT 1136 0.23645681124668522 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGGTAGACT 1084 0.22563308397130882 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGGTAGACTCGTA 948 0.19732487417417044 No Hit TCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 819 0.1704737045871789 TruSeq Adapter, Index 15 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCT 752 0.15652774829005925 No Hit GAAGAAGGAGAGGAATACTAAATTAAATGTCACAAGGTGCTGCTTCCACAG 662 0.13779437415960002 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTC 655 0.1363373339494532 No Hit ACTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 556 0.11573062240594804 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCC 509 0.10594763813781935 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0814860144954686E-4 0.0 0.0 0.3663415385512025 0.0 2 2.0814860144954686E-4 0.0 0.0 1.8945685703937756 0.0 3 2.0814860144954686E-4 0.0 0.0 2.4750950198365618 0.0 4 2.0814860144954686E-4 0.0 0.0 3.2864582682868955 0.0 5 2.0814860144954686E-4 0.0 0.0 5.9859374804860686 0.0 6 2.0814860144954686E-4 0.0 0.0 6.929266942255415 0.0 7 2.0814860144954686E-4 0.0 0.0 8.106347283452603 0.0 8 2.0814860144954686E-4 0.0 0.0 9.59044681178787 0.0 9 2.0814860144954686E-4 0.0 0.0 10.090003455266784 0.0 10 2.0814860144954686E-4 0.0 0.0 12.369646938342221 0.0 11 2.0814860144954686E-4 0.0 0.0 14.097904776177808 0.0 12 2.0814860144954686E-4 0.0 0.0 16.86732191846403 0.0 13 2.0814860144954686E-4 0.0 0.0 17.55109007422579 0.0 14 2.0814860144954686E-4 0.0 0.0 17.866018908218955 0.0 15 2.0814860144954686E-4 0.0 0.0 18.570601924125672 0.0 16 2.0814860144954686E-4 0.0 0.0 19.579914492554526 0.0 17 2.0814860144954686E-4 0.0 0.0 20.727854029548777 0.0 18 2.0814860144954686E-4 0.0 0.0 22.055217660992536 0.0 19 2.0814860144954686E-4 0.0 0.0 23.062448743406893 0.0 20 2.0814860144954686E-4 0.0 0.0 23.76120359847302 0.0 21 2.0814860144954686E-4 0.0 0.0 24.60358098853934 0.0 22 2.0814860144954686E-4 0.0 0.0 25.4469991216129 0.0 23 2.0814860144954686E-4 0.0 0.0 26.27064313754876 0.0 24 2.0814860144954686E-4 0.0 0.0 26.938800148201803 0.0 25 2.0814860144954686E-4 0.0 0.0 27.546177767231583 0.0 26 4.1629720289909373E-4 0.0 0.0 28.090070062819247 0.0 27 4.1629720289909373E-4 0.0 0.0 28.679546902124365 0.0 28 4.1629720289909373E-4 0.0 0.0 29.247792584081626 0.0 29 4.1629720289909373E-4 0.0 0.0 29.838726463596892 0.0 30 4.1629720289909373E-4 0.0 0.0 30.488982694525276 0.0 31 4.1629720289909373E-4 0.0 0.0 31.115093687685512 0.0 32 4.1629720289909373E-4 0.0 0.0 31.70810905321527 0.0 33 4.1629720289909373E-4 0.0 0.0 32.30154071594793 0.0 34 4.1629720289909373E-4 0.0 0.0 32.8887279206371 0.0 35 4.1629720289909373E-4 0.0 0.0 33.51254927918139 0.0 36 6.244458043486406E-4 0.0 0.0 34.126587653457555 0.0 37 6.244458043486406E-4 0.0 0.0 34.7039918738786 0.0 38 6.244458043486406E-4 0.0 0.0 35.290554632763424 0.0 39 6.244458043486406E-4 0.0 0.0 35.85775957171344 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.029181E-4 45.000004 25 CTGCTAT 20 7.029181E-4 45.000004 41 GAATGCG 20 7.029181E-4 45.000004 1 CAACGCC 20 7.029181E-4 45.000004 14 ACGCAAC 20 7.029181E-4 45.000004 22 GTTTACG 20 7.029181E-4 45.000004 1 GCAACGA 20 7.029181E-4 45.000004 11 ACACCCG 20 7.029181E-4 45.000004 10 ATCAGTC 20 7.029181E-4 45.000004 6 ATTCGAC 20 7.029181E-4 45.000004 13 TGACGTA 20 7.029181E-4 45.000004 26 CGTTCGA 20 7.029181E-4 45.000004 21 CCGCTAT 20 7.029181E-4 45.000004 26 ACCTAGC 20 7.029181E-4 45.000004 36 TTGACGA 20 7.029181E-4 45.000004 22 CGGTCTA 20 7.029181E-4 45.000004 31 GACGCAA 20 7.029181E-4 45.000004 21 AGTAGGC 20 7.029181E-4 45.000004 41 GTAAGCA 20 7.029181E-4 45.000004 29 CGGTAAC 20 7.029181E-4 45.000004 6 >>END_MODULE