##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936450.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1488480 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18460845963668 33.0 31.0 34.0 30.0 34.0 2 32.2488659572181 34.0 31.0 34.0 30.0 34.0 3 32.220266983768674 34.0 31.0 34.0 30.0 34.0 4 35.87582634633989 37.0 35.0 37.0 35.0 37.0 5 34.96142776523702 37.0 35.0 37.0 33.0 37.0 6 35.429924486724715 37.0 35.0 37.0 33.0 37.0 7 35.95221433946039 37.0 35.0 37.0 35.0 37.0 8 35.93635520799742 37.0 35.0 37.0 35.0 37.0 9 37.810100908309145 39.0 38.0 39.0 35.0 39.0 10 37.515863834247014 39.0 37.0 39.0 35.0 39.0 11 37.44078724604966 39.0 37.0 39.0 35.0 39.0 12 37.37523245189724 39.0 37.0 39.0 35.0 39.0 13 37.34992206815006 39.0 37.0 39.0 35.0 39.0 14 38.542815489627 40.0 38.0 41.0 34.0 41.0 15 38.62413603138772 40.0 38.0 41.0 35.0 41.0 16 38.61747823282812 40.0 38.0 41.0 35.0 41.0 17 38.57976459206707 40.0 38.0 41.0 34.0 41.0 18 38.49608661184564 40.0 38.0 41.0 34.0 41.0 19 38.34799862947436 40.0 37.0 41.0 34.0 41.0 20 38.27142252499194 40.0 37.0 41.0 34.0 41.0 21 38.18278646673116 40.0 37.0 41.0 34.0 41.0 22 38.21915175212297 40.0 37.0 41.0 34.0 41.0 23 38.20491373750403 40.0 37.0 41.0 34.0 41.0 24 38.16451279157261 40.0 36.0 41.0 34.0 41.0 25 38.017424486724714 40.0 36.0 41.0 34.0 41.0 26 38.038426448457486 40.0 36.0 41.0 34.0 41.0 27 38.03812278297323 40.0 36.0 41.0 34.0 41.0 28 37.912750591207136 40.0 36.0 41.0 34.0 41.0 29 37.85252270772869 40.0 36.0 41.0 34.0 41.0 30 37.71093397291197 40.0 36.0 41.0 33.0 41.0 31 37.64345641191014 40.0 36.0 41.0 33.0 41.0 32 37.485830511662904 40.0 36.0 41.0 33.0 41.0 33 37.25362383102225 40.0 35.0 41.0 33.0 41.0 34 37.06385440180587 40.0 35.0 41.0 32.0 41.0 35 36.929533483822425 40.0 35.0 41.0 31.0 41.0 36 36.829701440395574 40.0 35.0 41.0 31.0 41.0 37 36.78325674513598 40.0 35.0 41.0 31.0 41.0 38 36.68736496291519 40.0 35.0 41.0 31.0 41.0 39 36.59223637536279 40.0 35.0 41.0 31.0 41.0 40 36.46797807158981 39.0 35.0 41.0 30.0 41.0 41 36.366622326131356 39.0 35.0 41.0 30.0 41.0 42 36.35566752660432 39.0 35.0 41.0 30.0 41.0 43 36.25527853918091 39.0 35.0 41.0 30.0 41.0 44 36.12836719337848 39.0 35.0 41.0 30.0 41.0 45 36.08207701816618 39.0 35.0 41.0 30.0 41.0 46 35.96207809308825 39.0 35.0 41.0 29.0 41.0 47 35.87314777491132 39.0 35.0 41.0 29.0 41.0 48 35.80940556809631 39.0 35.0 41.0 29.0 41.0 49 35.779254675911 38.0 35.0 41.0 29.0 41.0 50 35.67125456841879 38.0 35.0 40.0 28.0 41.0 51 34.56489170160163 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 13.0 9 37.0 10 48.0 11 37.0 12 30.0 13 34.0 14 48.0 15 68.0 16 103.0 17 187.0 18 354.0 19 783.0 20 1331.0 21 2204.0 22 3358.0 23 4881.0 24 7316.0 25 11505.0 26 16327.0 27 19161.0 28 19783.0 29 20134.0 30 22036.0 31 25757.0 32 32787.0 33 45908.0 34 82119.0 35 106614.0 36 106344.0 37 158000.0 38 275576.0 39 525236.0 40 357.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.24939535633666 20.581600021498442 22.888517145006986 15.280487477157905 2 36.004447490056975 24.445743308610126 22.95637160055896 16.593437600773946 3 30.70205847576051 23.7890331075997 28.811136192626037 16.69777222401376 4 26.761058260776093 24.627203590239706 29.96640868537031 18.645329463613887 5 25.343303235515425 29.09552026228098 27.037716328066214 18.523460174137373 6 25.53067558851983 33.215360636353864 27.064119101365154 14.18984467376115 7 75.6031656454907 6.298573040954531 13.310625604643663 4.787635708911104 8 76.55165000537461 6.491185639041169 12.29993013006557 4.65723422551865 9 69.98878050091368 7.59419004622165 14.502445447705043 7.914584005159626 10 38.70639847361066 24.927241212512094 21.48560948081264 14.880750833064601 11 28.703643985811027 25.622447060088145 27.57584918843384 18.09805976566699 12 25.324089003547247 23.010856712888316 31.55151564011609 20.11353864344835 13 24.56835160700849 22.637724389981724 33.01508921853166 19.778834784478125 14 20.569574330861013 26.000618080189184 32.893690207459954 20.53611738148984 15 19.755320864237344 25.026873051703753 34.92992851768247 20.287877566376437 16 22.696374825325165 25.32476082983984 31.581277544877995 20.397586799957004 17 22.725733634311513 25.356403848221003 30.577770611630655 21.34009190583683 18 24.26025206922498 24.933287649145434 30.397049338922926 20.409410942706653 19 23.472804471675804 26.013449962377727 29.624852198215628 20.88889336773084 20 25.227346017413737 25.606591959582932 29.996372138019993 19.169689884983338 21 24.69929055143502 26.240997527679244 30.355866387186932 18.703845533698807 22 24.500967429861333 23.511501666129206 30.346662366978393 21.640868537031068 23 22.900274105127377 25.36554068580028 30.904546920348274 20.829638288724066 24 22.45478609050844 23.899615715360635 31.643555842201444 22.002042351929486 25 22.34776416209825 26.392292808771362 29.487127808233904 21.772815220896486 26 21.78611738148984 25.890371385574547 30.130535848650975 22.192975384284637 27 22.65035472428249 25.065570246157154 30.43776201225411 21.846313017306247 28 20.784625927120285 25.855906696764485 31.206062560464364 22.153404815650866 29 21.645974416854777 25.14585348812211 31.49111845641191 21.7170536386112 30 23.46326453832097 24.737450284854347 30.820837364291087 20.97844781253359 31 23.621815543373106 25.104737719015368 28.92588412340105 22.34756261421047 32 23.39957540578308 25.814522197140704 29.207916801031924 21.577985596044286 33 23.946509190583683 25.334771041599485 28.696052348704722 22.022667419112114 34 22.23079920455767 24.906145866924646 30.188716005589594 22.67433892292809 35 22.260964205095128 25.729401805869074 30.345318714393205 21.664315274642586 36 23.055331613458023 26.132833494571646 29.841784908094166 20.97004998387617 37 22.992583037729762 26.28500214984414 29.000456841878965 21.721957970547134 38 21.823067827582502 27.165228958400515 28.554162635708913 22.457540578308073 39 22.734064280339673 25.079880146189403 29.086652155218744 23.099403418252177 40 23.573175319789318 24.491024400730947 30.65805385359561 21.27774642588412 41 21.44368752015479 24.96540094593142 30.435209072342257 23.155702461571536 42 22.06942652907664 25.02062506718263 30.4971514565194 22.412796947221324 43 22.61589003547243 24.44130925507901 30.19341878963775 22.749381919810812 44 22.54756530151564 24.40435880898635 29.402612060625604 23.64546382887241 45 22.054243254864023 23.980033322584113 29.0050252606686 24.96069816188326 46 22.943875631516715 24.957271847791034 28.918292486294746 23.18056003439751 47 21.47042620660002 24.85421369450715 31.01976512952811 22.65559496936472 48 21.147680855637965 24.59435128453187 30.995176287219177 23.262791572610986 49 21.984977964097602 23.953832097172956 31.082244974739332 22.97894496399011 50 20.963466086208747 24.253399441040525 31.657932924862948 23.125201547887777 51 21.043749328173707 23.538643448349994 30.250591207137482 25.167016016338817 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 596.0 1 1201.5 2 1807.0 3 13904.5 4 26002.0 5 16918.0 6 7834.0 7 7562.5 8 7291.0 9 7332.5 10 7374.0 11 7194.5 12 7015.0 13 6761.5 14 6508.0 15 6250.5 16 5993.0 17 5842.5 18 5692.0 19 5686.5 20 5681.0 21 6071.0 22 6461.0 23 7104.5 24 7748.0 25 8722.0 26 11545.5 27 13395.0 28 16589.5 29 19784.0 30 22228.5 31 24673.0 32 28425.5 33 32178.0 34 36885.0 35 41592.0 36 45129.5 37 48667.0 38 52174.0 39 55681.0 40 60584.5 41 65488.0 42 69675.0 43 73862.0 44 81075.5 45 88289.0 46 109169.5 47 130050.0 48 127025.5 49 124001.0 50 122935.0 51 121869.0 52 109495.5 53 97122.0 54 89106.5 55 81091.0 56 77498.5 57 73906.0 58 68617.5 59 63329.0 60 60955.0 61 58581.0 62 54589.0 63 50597.0 64 44957.0 65 39317.0 66 33510.0 67 27703.0 68 23569.5 69 19436.0 70 16534.0 71 13632.0 72 10969.0 73 8306.0 74 6570.5 75 3863.5 76 2892.0 77 2190.0 78 1488.0 79 975.5 80 463.0 81 363.0 82 263.0 83 207.0 84 151.0 85 106.0 86 61.0 87 55.5 88 50.0 89 32.0 90 14.0 91 10.5 92 7.0 93 5.5 94 4.0 95 3.0 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1488480.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.581142524334467 #Duplication Level Percentage of deduplicated Percentage of total 1 74.50071839047084 19.80314213702411 2 8.901338616877718 4.732155008651776 3 3.2205915675590036 2.568210104098669 4 1.607948768418765 1.7096446154066909 5 1.0883422068523714 1.446468965779579 6 0.7931137753868291 1.2649122180942178 7 0.6574434891213032 1.223291936022037 8 0.5056492371293504 1.0752587551565007 9 0.4624167643269563 1.1062409326394766 >10 7.589883691481478 48.85628449162513 >50 0.6177191293752486 9.98380306025327 >100 0.04759208869166312 2.127831363843747 >500 0.003362484500375987 0.5978058618018673 >1k 0.003362484500375987 1.9935570751934382 >5k 2.5865265387507594E-4 0.42750510048119733 >10k+ 2.5865265387507594E-4 1.0838883739282852 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15765 1.0591341502741052 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTC 6218 0.41774158873481676 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCG 4018 0.2699398043641836 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGC 4004 0.2689992475545523 No Hit CGCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCTG 2847 0.19126894550145115 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTT 2677 0.17984789852735678 No Hit GCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCTGC 2672 0.1795119853810599 TruSeq Adapter, Index 13 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCTGC 1940 0.13033430076319466 TruSeq Adapter, Index 13 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTC 1857 0.12475814253466624 No Hit CTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCTGCT 1677 0.11266526926797807 TruSeq Adapter, Index 19 (95% over 22bp) CGTTTTCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCT 1628 0.1093733204342685 No Hit GAACTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCT 1569 0.10540954530796519 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0154788777813608E-4 0.0 0.0 0.11884607115984092 0.0 2 2.0154788777813608E-4 0.0 0.0 0.5205981941309256 0.0 3 2.0154788777813608E-4 0.0 0.0 0.8932602386326991 0.0 4 2.0154788777813608E-4 0.0 0.0 1.3456008814360958 0.0 5 2.0154788777813608E-4 0.0 0.0 2.5629501236160377 0.0 6 2.6873051703751476E-4 0.0 0.0 3.513517145006987 0.0 7 2.6873051703751476E-4 0.0 0.0 4.157597011716651 0.0 8 2.6873051703751476E-4 0.0 0.0 4.991467806084059 0.0 9 2.6873051703751476E-4 0.0 0.0 5.386501666129206 0.0 10 2.6873051703751476E-4 0.0 0.0 6.295684187896377 0.0 11 3.3591314629689346E-4 0.0 0.0 7.113699881758572 0.0 12 4.0309577555627216E-4 0.0 0.0 8.023822960335377 0.0 13 4.0309577555627216E-4 0.0 0.0 8.356578523057077 0.0 14 4.0309577555627216E-4 0.0 0.0 8.526013114049231 0.0 15 4.0309577555627216E-4 0.0 0.0 8.785002149844136 0.0 16 4.0309577555627216E-4 0.0 0.0 9.217523917016017 0.0 17 4.0309577555627216E-4 0.0 0.0 9.667378802536817 0.0 18 4.7027840481565086E-4 0.0 0.0 10.136044824250241 0.0 19 4.7027840481565086E-4 0.0 0.0 10.48337901752123 0.0 20 4.7027840481565086E-4 0.0 0.0 10.813783188218855 0.0 21 4.7027840481565086E-4 0.0 0.0 11.188595076856927 0.0 22 4.7027840481565086E-4 0.0 0.0 11.633276899924756 0.0 23 4.7027840481565086E-4 0.0 0.0 12.024951628506933 0.0 24 4.7027840481565086E-4 0.0 0.0 12.376518327421262 0.0 25 4.7027840481565086E-4 0.0 0.0 12.680721272707729 0.0 26 4.7027840481565086E-4 0.0 0.0 12.985192948511234 0.0 27 4.7027840481565086E-4 0.0 0.0 13.287649145436955 0.0 28 4.7027840481565086E-4 0.0 0.0 13.586074384607116 0.0 29 4.7027840481565086E-4 0.0 0.0 13.913052241212512 0.0 30 4.7027840481565086E-4 0.0 0.0 14.323941201762873 0.0 31 5.374610340750295E-4 0.0 0.0 14.664489949478662 0.0 32 5.374610340750295E-4 0.0 0.0 15.004434053531119 0.0 33 6.046436633344082E-4 0.0 0.0 15.363458024293239 0.0 34 7.390089218531656E-4 0.0 0.0 15.710120391271634 0.0 35 7.390089218531656E-4 0.0 0.0 16.069816188326346 0.0 36 7.390089218531656E-4 0.0 0.0 16.400825002687306 0.0 37 8.061915511125443E-4 0.0 0.0 16.73754434053531 0.0 38 8.061915511125443E-4 0.0 0.0 17.093276362463723 0.0 39 8.061915511125443E-4 0.0 0.0 17.48481672578738 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGA 20 7.033958E-4 45.0 13 TAATGCG 45 3.8562575E-10 45.0 1 CGTTTTT 7825 0.0 42.64217 1 CGCGTAA 50 1.0822987E-9 40.5 31 TATAGCG 80 0.0 39.375 1 ACAACGA 355 0.0 38.661972 13 ACGTACG 35 6.249531E-6 38.57143 1 CGTAAGG 170 0.0 38.38235 2 GCGTAAG 95 0.0 37.894737 1 CCGACCG 60 1.5643309E-10 37.500004 15 ATTAGCG 100 0.0 36.0 1 CACGCTA 25 0.0021073078 36.0 30 TACGCTA 25 0.0021073078 36.0 15 CGTCCGA 25 0.0021073078 36.0 36 CGATCGG 45 8.702227E-7 35.0 2 GTTTTTT 10100 0.0 34.396038 2 ATAGCGG 230 0.0 34.23913 2 CTACGGG 435 0.0 34.13793 3 ATAGGGC 720 0.0 34.0625 4 ACGGGTA 185 0.0 34.054054 5 >>END_MODULE