##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936449.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1434546 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07323292525998 33.0 31.0 34.0 30.0 34.0 2 32.11636434105285 33.0 31.0 34.0 30.0 34.0 3 32.13285457559395 33.0 31.0 34.0 30.0 34.0 4 35.791211296117375 37.0 35.0 37.0 35.0 37.0 5 34.8421953705214 37.0 35.0 37.0 33.0 37.0 6 35.32626559204097 37.0 35.0 37.0 33.0 37.0 7 35.9017138523268 37.0 35.0 37.0 35.0 37.0 8 35.90024439787919 37.0 35.0 37.0 35.0 37.0 9 37.7437593496479 39.0 38.0 39.0 35.0 39.0 10 37.41830934665044 39.0 37.0 39.0 35.0 39.0 11 37.33401438503889 39.0 37.0 39.0 34.0 39.0 12 37.16142249882541 39.0 37.0 39.0 34.0 39.0 13 37.05025143843418 39.0 37.0 39.0 33.0 39.0 14 37.94478253050094 40.0 37.0 41.0 33.0 41.0 15 38.11933740709604 40.0 37.0 41.0 33.0 41.0 16 38.18385259169103 40.0 37.0 41.0 33.0 41.0 17 38.20079244583304 40.0 37.0 41.0 34.0 41.0 18 38.17939961493044 40.0 37.0 41.0 34.0 41.0 19 38.09805750390716 40.0 37.0 41.0 34.0 41.0 20 38.0824072563724 40.0 36.0 41.0 34.0 41.0 21 37.97996648416991 40.0 36.0 41.0 33.0 41.0 22 38.05633350202782 40.0 36.0 41.0 34.0 41.0 23 38.06834636184549 40.0 36.0 41.0 34.0 41.0 24 38.03018934213333 40.0 36.0 41.0 34.0 41.0 25 37.869485537584715 40.0 36.0 41.0 34.0 41.0 26 37.90957069344587 40.0 36.0 41.0 34.0 41.0 27 37.90587265936401 40.0 36.0 41.0 34.0 41.0 28 37.78067974118641 40.0 36.0 41.0 34.0 41.0 29 37.73483318067179 40.0 35.0 41.0 33.0 41.0 30 37.59333893789394 40.0 35.0 41.0 33.0 41.0 31 37.51858497392206 40.0 35.0 41.0 33.0 41.0 32 37.412865812598554 40.0 35.0 41.0 33.0 41.0 33 37.25736225955808 40.0 35.0 41.0 32.0 41.0 34 37.135295766047236 40.0 35.0 41.0 32.0 41.0 35 37.06396727605807 40.0 35.0 41.0 32.0 41.0 36 36.988749053707586 39.0 35.0 41.0 32.0 41.0 37 36.96559190154934 39.0 35.0 41.0 32.0 41.0 38 36.84674105954079 39.0 35.0 41.0 31.0 41.0 39 36.78269849834024 39.0 35.0 41.0 31.0 41.0 40 36.644078335584915 39.0 35.0 41.0 31.0 41.0 41 36.55011759818089 39.0 35.0 41.0 31.0 41.0 42 36.582756495783336 39.0 35.0 41.0 31.0 41.0 43 36.498074652189615 39.0 35.0 41.0 31.0 41.0 44 36.38096791598178 39.0 35.0 41.0 31.0 41.0 45 36.30324855389789 39.0 35.0 41.0 31.0 41.0 46 36.18698250178105 38.0 35.0 41.0 30.0 41.0 47 36.079162327314705 38.0 35.0 40.0 30.0 41.0 48 36.012155762171446 38.0 35.0 40.0 30.0 41.0 49 35.99082636597223 38.0 35.0 40.0 30.0 41.0 50 35.87665644740566 38.0 35.0 40.0 30.0 41.0 51 34.737001113941275 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 9.0 9 29.0 10 28.0 11 35.0 12 30.0 13 44.0 14 38.0 15 72.0 16 104.0 17 203.0 18 370.0 19 651.0 20 1198.0 21 1902.0 22 2852.0 23 4288.0 24 6253.0 25 8910.0 26 11716.0 27 14043.0 28 15390.0 29 18123.0 30 21909.0 31 28129.0 32 36578.0 33 54273.0 34 99491.0 35 111723.0 36 102660.0 37 156779.0 38 274945.0 39 461476.0 40 292.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.58500877629577 21.348147776369668 23.181689538014115 11.88515390932044 2 33.198935412318605 24.672753609852872 24.01435715550425 18.113953822324273 3 32.48156559636289 24.95953423591854 25.89781017827243 16.661089989446136 4 28.704970074155867 25.237392178431367 26.847936559719937 19.209701187692833 5 25.27224641105967 30.44593899393955 25.43675838906525 18.84505620593554 6 26.36778465103245 33.496102599707505 25.732531407149022 14.403581342111025 7 78.45450755848888 6.144522378508601 10.498931369227616 4.9020386937748945 8 79.16602186336304 5.995137137463699 9.920281399132548 4.91855960004071 9 72.64444639628147 7.703970454764085 12.219266583295342 7.4323165656591 10 40.573742494141 25.860655566290657 19.31440330250825 14.251198637060087 11 32.88573527792068 24.633786577774433 24.629464652928522 17.851013491376367 12 29.06222595859596 22.493527569000925 29.196693588075952 19.247552884327167 13 26.62026871219187 23.52632819024277 30.750704404041418 19.102698693523944 14 21.309180744291226 25.985154885238952 31.981267941216245 20.724396429253574 15 20.1725842182823 24.783311235749846 34.979429031902775 20.06467551406508 16 25.232930836654944 26.370851823503745 29.18742236219682 19.208794977644494 17 25.375763481965723 24.999058935719034 28.022524199293713 21.60265338302153 18 27.063614551223868 23.655010017106456 29.843169894865696 19.43820553680398 19 24.59468012876548 26.05876702454993 28.01353180727561 21.333021039408983 20 25.589001677185674 28.00704892000675 27.51497686376038 18.888972539047195 21 24.49304518642135 27.577923607887094 29.943968335626742 17.985062870064816 22 23.825168380797827 23.79142948361363 30.743733557515757 21.639668578072786 23 22.250872401442688 26.187657976809387 30.561167087008712 21.000302534739212 24 23.091695909367843 25.23230346046763 29.690438647488477 21.985561982676053 25 23.2559290535124 26.603538680530285 27.556104858261776 22.584427407695536 26 21.964091775377018 25.55819053554226 27.791858887759613 24.685858801321114 27 22.75263393435972 24.66641013951452 29.456636455017826 23.12431947110793 28 20.090328229279507 26.853443528475214 28.83420956874161 24.222018673503673 29 22.215181667231302 27.2396284259968 27.352486431247236 23.192703475524663 30 24.506638337146384 25.317696330406974 28.521079142808947 21.654586189637698 31 25.859121980055015 25.49754417076901 26.88327875160504 21.760055097570937 32 25.68059860053285 27.372632177706397 25.505978895065056 21.440790326695694 33 25.29044032049164 26.82646635242091 25.081942300909137 22.801151026178317 34 21.66211470388541 27.050648776686142 28.7797672573762 22.507469262052247 35 21.201062914678232 29.357929268214473 26.76721415695279 22.6737936601545 36 23.588020181994864 30.028036744726204 24.90990180865584 21.474041264623093 37 22.871695993018 29.246813974595447 25.89021195555946 21.991278076827093 38 22.33145538727932 30.734392623171374 25.327455515542894 21.60669647400641 39 22.05764053575138 27.372144218449602 25.846853290169854 24.723361955629166 40 24.037291240573673 25.873063673106333 27.30808213887878 22.781562947441213 41 21.020796823524655 26.801859264185325 26.043500870658733 26.133843041631287 42 21.67870531861648 26.235547692440676 28.28685869954676 23.79888828939609 43 22.214693707974508 25.8964160089673 27.784400081977157 24.10449020108104 44 23.01717756000853 24.92363437631139 26.97787313895825 25.081314924721827 45 22.440549135405906 24.357810763823537 26.48970475676625 26.711935344004306 46 22.52928801167756 26.026770838997148 26.16549068485779 25.278450464467504 47 20.167356083388054 26.909698259937294 29.341896321205457 23.5810493354692 48 20.916582667966033 27.309685433579684 28.065813156218066 23.70791874223622 49 23.38809630363892 25.33045297954893 28.362771218211197 22.91867949860095 50 20.80003011405699 25.919001551710437 28.297593803196275 24.9833745310363 51 20.46535977236004 25.213273049452578 26.621802298427514 27.69956487975987 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 565.0 1 1078.5 2 1592.0 3 6148.5 4 10705.0 5 6983.0 6 3261.0 7 3155.5 8 3050.0 9 3081.0 10 3112.0 11 3202.5 12 3293.0 13 3248.0 14 3203.0 15 3177.0 16 3151.0 17 3041.5 18 2932.0 19 2944.0 20 2956.0 21 3908.0 22 4860.0 23 5567.5 24 6275.0 25 7606.5 26 10706.5 27 12475.0 28 14695.0 29 16915.0 30 19738.5 31 22562.0 32 25006.5 33 27451.0 34 33037.5 35 38624.0 36 41607.5 37 44591.0 38 47864.0 39 51137.0 40 55383.0 41 59629.0 42 64855.0 43 70081.0 44 79695.0 45 89309.0 46 107049.0 47 124789.0 48 131233.0 49 137677.0 50 137785.5 51 137894.0 52 123831.5 53 109769.0 54 101221.5 55 92674.0 56 84978.5 57 77283.0 58 73313.5 59 69344.0 60 62478.0 61 55612.0 62 50731.5 63 45851.0 64 39534.0 65 33217.0 66 28036.5 67 22856.0 68 19291.5 69 15727.0 70 12395.0 71 9063.0 72 7298.0 73 5533.0 74 4300.0 75 2395.0 76 1723.0 77 1374.5 78 1026.0 79 702.5 80 379.0 81 289.5 82 200.0 83 133.0 84 66.0 85 61.5 86 57.0 87 49.0 88 41.0 89 29.5 90 18.0 91 12.5 92 7.0 93 4.0 94 1.0 95 2.0 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1434546.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.53746087730317 #Duplication Level Percentage of deduplicated Percentage of total 1 72.4531245565826 19.95175082915267 2 10.777222014284279 5.935546591687276 3 4.0530657501989875 3.3483341858772606 4 2.084100888558718 2.2956338673215395 5 1.2895970275091946 1.775611384626045 6 0.8494901858358717 1.4035681654864989 7 0.652865330573551 1.2584777449171736 8 0.5110009554252949 1.125733505463088 9 0.42927602032861045 1.063905445382716 >10 6.036695780690646 41.72100550870233 >50 0.7916242347990536 13.44228582317952 >100 0.06365670788190791 3.302660696247581 >500 0.003881506561565909 0.6689690718464589 >1k 0.0041402736656703035 2.2585900832174435 >5k 2.5876710410439397E-4 0.44792709689250537 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6286 0.4381874126030117 No Hit GCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 3552 0.2476044685914568 No Hit GAATCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC 3440 0.23979712048271717 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGC 3021 0.21058927354020018 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCG 2822 0.19671728895413598 No Hit CCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 2625 0.18298472129858506 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2558 0.1783142541263926 No Hit CTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGCT 2106 0.14680602783040766 No Hit CGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG 1588 0.11069704282748688 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC 1460 0.1017743592746416 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1445 0.10072873229579253 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7883386102641535E-4 0.0 0.0 0.1544739590086341 0.0 2 2.7883386102641535E-4 0.0 0.0 0.7413495280039818 0.0 3 3.485423262830192E-4 0.0 0.0 1.1206332874651632 0.0 4 3.485423262830192E-4 0.0 0.0 1.6101261304970353 0.0 5 3.485423262830192E-4 0.0 0.0 3.012869576855674 0.0 6 3.485423262830192E-4 0.0 0.0 3.9313483150766864 0.0 7 3.485423262830192E-4 0.0 0.0 4.741918349080476 0.0 8 3.485423262830192E-4 0.0 0.0 5.862621345010895 0.0 9 3.485423262830192E-4 0.0 0.0 6.365358796441522 0.0 10 3.485423262830192E-4 0.0 0.0 7.489477507169515 0.0 11 4.1825079153962297E-4 0.0 0.0 8.764166502851774 0.0 12 4.1825079153962297E-4 0.0 0.0 9.864793460788292 0.0 13 4.879592567962268E-4 0.0 0.0 10.306396588188877 0.0 14 4.879592567962268E-4 0.0 0.0 10.54647254253262 0.0 15 4.879592567962268E-4 0.0 0.0 10.903867843903228 0.0 16 4.879592567962268E-4 0.0 0.0 11.50398802129733 0.0 17 4.879592567962268E-4 0.0 0.0 12.164196895742625 0.0 18 5.576677220528307E-4 0.0 0.0 12.913632605716373 0.0 19 5.576677220528307E-4 0.0 0.0 13.416858016403795 0.0 20 6.273761873094345E-4 0.0 0.0 13.939392671967298 0.0 21 6.273761873094345E-4 0.0 0.0 14.53686392768165 0.0 22 6.970846525660384E-4 0.0 0.0 15.159430230888379 0.0 23 6.970846525660384E-4 0.0 0.0 15.75013976547284 0.0 24 6.970846525660384E-4 0.0 0.0 16.233010304305335 0.0 25 6.970846525660384E-4 0.0 0.0 16.699150811476244 0.0 26 8.365015830792459E-4 0.0 0.0 17.150791957873782 0.0 27 8.365015830792459E-4 0.0 0.0 17.679460958379863 0.0 28 9.759185135924536E-4 0.0 0.0 18.113535571532736 0.0 29 9.759185135924536E-4 0.0 0.0 18.618921944643112 0.0 30 0.0010456269788490574 0.0 0.0 19.283731577795344 0.0 31 0.0011153354441056614 0.0 0.0 19.77852226418672 0.0 32 0.0011153354441056614 0.0 0.0 20.269130442662696 0.0 33 0.0011153354441056614 0.0 0.0 20.766639759199077 0.0 34 0.0011850439093622652 0.0 0.0 21.27906668730037 0.0 35 0.0011850439093622652 0.0 0.0 21.831366857528444 0.0 36 0.0011850439093622652 0.0 0.0 22.332431305792912 0.0 37 0.001254752374618869 0.0 0.0 22.825409572087615 0.0 38 0.001254752374618869 0.0 0.0 23.385586798889683 0.0 39 0.0014638777703886805 0.0 0.0 24.26168279023468 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTAC 20 7.033872E-4 45.000004 45 TCGTCGT 25 3.8912916E-5 45.0 22 CGGTCTA 75 0.0 45.0 31 TCGAATT 30 2.1658798E-6 44.999996 36 CGTTTTT 3500 0.0 40.949997 1 CGCATCG 40 3.4590266E-7 39.375004 21 AATTGCG 40 3.4590266E-7 39.375004 1 CGTAAGG 205 0.0 38.414635 2 TCGTAAG 65 9.094947E-12 38.076927 1 TAGCGAT 30 1.14006325E-4 37.499996 1 TAACGCC 60 1.5643309E-10 37.499996 12 CGTACGA 30 1.14006325E-4 37.499996 15 GCGAGAC 235 0.0 37.340427 21 TCGTCCC 170 0.0 37.058823 38 ATTGGGA 820 0.0 37.042686 4 GTCGACG 25 0.0021072824 36.0 1 GGTCGAT 25 0.0021072824 36.0 15 TCGATTG 75 1.8189894E-12 36.0 1 CGGATTA 25 0.0021072824 36.0 26 TAGTCGA 25 0.0021072824 36.0 44 >>END_MODULE