##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936445.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1129691 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05272680759606 33.0 31.0 34.0 30.0 34.0 2 32.09494720237658 33.0 31.0 34.0 30.0 34.0 3 32.15536549375006 34.0 31.0 34.0 30.0 34.0 4 35.8205553554025 37.0 35.0 37.0 35.0 37.0 5 34.901070292672955 37.0 35.0 37.0 33.0 37.0 6 35.37924087206147 37.0 35.0 37.0 33.0 37.0 7 35.916974641738314 37.0 35.0 37.0 35.0 37.0 8 35.902920356097376 37.0 35.0 37.0 35.0 37.0 9 37.760733687353444 39.0 38.0 39.0 35.0 39.0 10 37.452341392469265 39.0 37.0 39.0 35.0 39.0 11 37.373649962688916 39.0 37.0 39.0 35.0 39.0 12 37.31792056411886 39.0 37.0 39.0 35.0 39.0 13 37.23614599036374 39.0 37.0 39.0 34.0 39.0 14 38.34458626296925 40.0 38.0 41.0 34.0 41.0 15 38.474448322594405 40.0 38.0 41.0 34.0 41.0 16 38.48244431441872 40.0 38.0 41.0 34.0 41.0 17 38.49645876615818 40.0 38.0 41.0 34.0 41.0 18 38.44525184320314 40.0 38.0 41.0 34.0 41.0 19 38.40896669974356 40.0 37.0 41.0 34.0 41.0 20 38.39778665139406 40.0 37.0 41.0 34.0 41.0 21 38.30152227467511 40.0 37.0 41.0 34.0 41.0 22 38.3486325021621 40.0 37.0 41.0 34.0 41.0 23 38.32392751646247 40.0 37.0 41.0 34.0 41.0 24 38.27946845641861 40.0 37.0 41.0 34.0 41.0 25 38.134578393560716 40.0 37.0 41.0 34.0 41.0 26 38.17871081561241 40.0 37.0 41.0 34.0 41.0 27 38.18599864918814 40.0 37.0 41.0 34.0 41.0 28 38.05275247833257 40.0 37.0 41.0 34.0 41.0 29 37.985115398812596 40.0 37.0 41.0 34.0 41.0 30 37.87928026336405 40.0 36.0 41.0 33.0 41.0 31 37.86132314057561 40.0 36.0 41.0 33.0 41.0 32 37.797622535719945 40.0 36.0 41.0 33.0 41.0 33 37.6837259038091 40.0 36.0 41.0 33.0 41.0 34 37.60044206778668 40.0 36.0 41.0 33.0 41.0 35 37.51168062771147 40.0 36.0 41.0 33.0 41.0 36 37.3596390517407 40.0 36.0 41.0 33.0 41.0 37 37.32297061762907 40.0 35.0 41.0 32.0 41.0 38 37.24349136179716 40.0 35.0 41.0 32.0 41.0 39 37.17526031454619 40.0 35.0 41.0 32.0 41.0 40 37.079767830318204 39.0 35.0 41.0 32.0 41.0 41 36.96845066482781 39.0 35.0 41.0 32.0 41.0 42 36.98473210816055 39.0 35.0 41.0 32.0 41.0 43 36.86374327139014 39.0 35.0 41.0 31.0 41.0 44 36.7211352484883 39.0 35.0 41.0 31.0 41.0 45 36.66266173670499 39.0 35.0 41.0 31.0 41.0 46 36.540374314746245 39.0 35.0 41.0 31.0 41.0 47 36.458523613979395 39.0 35.0 41.0 31.0 41.0 48 36.410710539430696 39.0 35.0 41.0 31.0 41.0 49 36.37985962533117 39.0 35.0 40.0 31.0 41.0 50 36.258223708961125 38.0 35.0 40.0 31.0 41.0 51 35.06682712352316 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 7.0 9 20.0 10 22.0 11 29.0 12 19.0 13 24.0 14 35.0 15 34.0 16 67.0 17 127.0 18 253.0 19 416.0 20 769.0 21 1180.0 22 1824.0 23 2647.0 24 3808.0 25 5403.0 26 7315.0 27 8740.0 28 10246.0 29 12489.0 30 15014.0 31 19457.0 32 25900.0 33 37205.0 34 65814.0 35 83619.0 36 84265.0 37 131088.0 38 226979.0 39 384595.0 40 277.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.89856075687953 20.443820478343195 23.299203056411 11.358415708366271 2 30.241986525518925 23.981425009139667 23.81607005809553 21.960518407245875 3 30.321388769141294 23.48553719556941 30.120714425449087 16.072359609840213 4 27.60790340013331 23.77659023573703 25.223269017811067 23.392237346318595 5 24.098005560812645 33.69160239392896 23.6161038726519 18.59428817260649 6 24.75756644958666 37.56947696316957 23.500497038570725 14.172459548673045 7 74.34625928683153 6.565069563269955 9.30369455010264 9.784976599795874 8 74.86179849179997 6.148583993322068 13.452085570301966 5.537531944575995 9 68.24742341047242 7.598892086420092 16.053150817347397 8.10053368576009 10 43.076469583275426 24.011964333609807 18.370510166054256 14.541055917060506 11 28.232498975383535 28.68793324900349 24.18749905947733 18.89206871613565 12 25.63656787564033 21.16295517977925 28.814870615061995 24.385606329518424 13 24.17439813187854 22.50243650697403 29.40202232291839 23.921143038229037 14 20.258371536995515 25.438283566037086 29.34528114325068 24.958063753716726 15 19.379724190066135 23.255474284561 36.20149226646932 21.16330925890354 16 25.075529503200432 23.58228931628206 29.913312578395328 21.428868602122172 17 22.284500805972606 23.56803763152933 26.356587774887114 27.79087378761095 18 22.466231916515227 27.189204835658597 29.989085510993714 20.355477736832462 19 22.908299703193176 25.567522446403483 29.8605547888759 21.663623061527446 20 23.868827847614966 26.01144914848397 30.952711847753058 19.16701115614801 21 23.875201271852216 29.69546539717498 27.425021532436745 19.00431179853606 22 26.54221375579694 23.891754470912844 26.83211603881061 22.733915734479606 23 21.914753680431197 28.303934438709344 27.532927145564585 22.248384735294874 24 21.838892228051744 28.65137457942039 27.32154190836255 22.188191284165313 25 21.109046633105866 28.803451563303597 26.332510394435293 23.754991409155245 26 20.38380406677578 27.15105281001619 29.09379644522263 23.371346677985397 27 21.460381644184118 26.42554468434289 29.227726873985894 22.8863467974871 28 21.649371376774713 25.96232066998852 29.133364787362208 23.25494316587456 29 20.616876650340668 28.339430870919568 27.671726162286852 23.371966316452905 30 21.650699173490803 29.420434437381548 26.80060299674867 22.128263392378976 31 24.474922788620958 26.288693102804217 26.335077468086403 22.901306640488418 32 24.615049602059326 28.96446904507516 24.235034181913463 22.18544717095206 33 23.6640815939934 26.042342552078402 25.01940796200023 25.274167891927966 34 21.644414269034627 25.659228939594986 29.09680611777911 23.599550673591274 35 26.15060224433053 26.681986490111015 25.344098518975542 21.823312746582914 36 23.30690427736434 28.082280906902863 27.1422008319089 21.468613983823897 37 22.24121463302797 29.23100210588559 26.91399683630302 21.613786424783417 38 23.140221529604112 28.038552135052857 25.536717562590123 23.284508772752904 39 23.19979534226616 26.2675368751278 26.725272663055648 23.80739511955039 40 24.95204440860377 23.148984987930326 29.635980104294006 22.2629904991719 41 21.698411335489084 26.956397811436933 26.81441208259604 24.530778770477944 42 22.37603025960196 24.426236909030877 27.304103511491196 25.893629319875966 43 23.021250943842166 26.491314881680033 27.25435539452824 23.23307877994956 44 22.699481539642257 25.088895990142433 27.78901487220842 24.422607598006888 45 22.964155685050162 24.834401619557912 26.602938325612936 25.59850436977899 46 22.988941223750565 25.69897432129671 27.306847624704456 24.005236830248272 47 21.714964534549715 24.1875875792584 30.25128110253158 23.846166783660312 48 20.80613194227448 25.099075764965818 28.930211889799956 25.164580402959746 49 22.289280874150542 25.06720864377958 28.70687648215308 23.936633999916793 50 21.413200600872273 23.683555945829436 30.78815357473858 24.11508987855971 51 21.385847988520755 24.277966275733807 27.31437180609565 27.02181392964979 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 367.0 1 813.0 2 1259.0 3 2911.0 4 4563.0 5 3134.0 6 1705.0 7 1750.5 8 1796.0 9 1863.5 10 1931.0 11 1990.5 12 2050.0 13 2024.0 14 1998.0 15 2131.0 16 2264.0 17 2174.0 18 2084.0 19 2330.0 20 2576.0 21 2685.0 22 2794.0 23 3258.0 24 3722.0 25 4634.0 26 6768.0 27 7990.0 28 9946.5 29 11903.0 30 20427.5 31 28952.0 32 26069.0 33 23186.0 34 25761.0 35 28336.0 36 32247.5 37 36159.0 38 41124.5 39 46090.0 40 49992.0 41 53894.0 42 59278.0 43 64662.0 44 67901.5 45 71141.0 46 87360.0 47 103579.0 48 108814.5 49 114050.0 50 109932.5 51 105815.0 52 90465.5 53 75116.0 54 68306.0 55 61496.0 56 55148.0 57 48800.0 58 48364.5 59 47929.0 60 44645.0 61 41361.0 62 38563.0 63 35765.0 64 33929.5 65 32094.0 66 27467.5 67 22841.0 68 18220.0 69 13599.0 70 11064.5 71 8530.0 72 6566.0 73 4602.0 74 4067.5 75 2767.5 76 2002.0 77 1440.0 78 878.0 79 603.5 80 329.0 81 286.5 82 244.0 83 170.5 84 97.0 85 60.0 86 23.0 87 23.0 88 23.0 89 18.5 90 14.0 91 7.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1129691.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.034927127139163 #Duplication Level Percentage of deduplicated Percentage of total 1 71.8417079973426 19.422353403973684 2 11.749449144560215 6.352910028144261 3 4.393116581681598 3.5630275994036613 4 2.1295738384575547 2.302914941382481 5 1.2224044938275889 1.6523808205258153 6 0.7788398428923508 1.2633527037784331 7 0.5829036333063121 1.1031130074006559 8 0.4673617237805182 1.0108072115536362 9 0.3675387361647519 0.8942744653753406 >10 5.606321557509792 39.26366021562009 >50 0.7924716634875153 13.089844482749982 >100 0.057473017899563286 3.069734284787457 >500 0.00426942418682031 0.7814175808526549 >1k 0.005911510412520429 4.115116695529922 >5k 3.2841724514002385E-4 0.8843221344497718 >10k+ 3.2841724514002385E-4 1.2307704244721627 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 13862 1.2270612052322272 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 9960 0.8816570194858594 No Hit GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCAAT 4864 0.4305602151384759 No Hit GCTCAACTTGACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATG 4796 0.42454087002552027 No Hit GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCAATGGCGATCGTA 4068 0.3600984694044655 No Hit GCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 3557 0.3148648612762251 No Hit CCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 3514 0.3110585106900914 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACCTGTCTCTTATACACATC 3196 0.2829092203089163 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGC 2726 0.24130492320466393 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2549 0.22563692195476465 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCG 2504 0.22165353180648514 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 2493 0.2206798142146835 No Hit CTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGCT 2195 0.19430091945496603 Illumina Single End Adapter 1 (95% over 21bp) GCTCAACTTGACCCTGCATTAGAAATTGAAGCTGTCTCTTATACACATCTG 2170 0.19208792492814405 No Hit GCTCAACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTC 1787 0.158184848777232 No Hit CGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 1299 0.11498719561366781 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCC 1285 0.11374791867864752 No Hit TCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 1171 0.10365666363633949 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.851978107287745E-5 0.0 0.0 0.20545441187014857 0.0 2 8.851978107287745E-5 0.0 0.0 1.0738334641950764 0.0 3 8.851978107287745E-5 0.0 0.0 1.5683049612681699 0.0 4 8.851978107287745E-5 0.0 0.0 2.1070363488777017 0.0 5 8.851978107287745E-5 0.0 0.0 3.6763150277376733 0.0 6 8.851978107287745E-5 0.0 0.0 4.4820220750630035 0.0 7 8.851978107287745E-5 0.0 0.0 5.264713979309386 0.0 8 8.851978107287745E-5 0.0 0.0 6.542762578439591 0.0 9 8.851978107287745E-5 0.0 0.0 7.027496899594668 0.0 10 8.851978107287745E-5 0.0 0.0 8.246502804749264 0.0 11 8.851978107287745E-5 0.0 0.0 9.645646464387164 0.0 12 8.851978107287745E-5 0.0 0.0 10.978754367344699 0.0 13 8.851978107287745E-5 0.0 0.0 11.927066781978434 0.0 14 8.851978107287745E-5 0.0 0.0 12.168283185402025 0.0 15 1.770395621457549E-4 0.0 0.0 12.955843677607417 0.0 16 1.770395621457549E-4 0.0 0.0 13.696223126500964 0.0 17 1.770395621457549E-4 0.0 0.0 14.524591237780951 0.0 18 1.770395621457549E-4 0.0 0.0 15.47237253372825 0.0 19 1.770395621457549E-4 0.0 0.0 16.082008265977155 0.0 20 1.770395621457549E-4 0.0 0.0 16.721209605104406 0.0 21 1.770395621457549E-4 0.0 0.0 17.406087151265258 0.0 22 1.770395621457549E-4 0.0 0.0 18.123185897736636 0.0 23 1.770395621457549E-4 0.0 0.0 18.87666627422897 0.0 24 1.770395621457549E-4 0.0 0.0 19.494445826336584 0.0 25 1.770395621457549E-4 0.0 0.0 20.472766446754022 0.0 26 2.6555934321863234E-4 0.0 0.0 20.979365153834102 0.0 27 2.6555934321863234E-4 0.0 0.0 21.49587807639434 0.0 28 2.6555934321863234E-4 0.0 0.0 21.97052114250711 0.0 29 2.6555934321863234E-4 0.0 0.0 22.487211104629495 0.0 30 2.6555934321863234E-4 0.0 0.0 23.103043221553506 0.0 31 2.6555934321863234E-4 0.0 0.0 23.62743440462923 0.0 32 2.6555934321863234E-4 0.0 0.0 24.323731002548485 0.0 33 2.6555934321863234E-4 0.0 0.0 24.818999177651232 0.0 34 2.6555934321863234E-4 0.0 0.0 25.623112868917254 0.0 35 2.6555934321863234E-4 0.0 0.0 26.16724396317223 0.0 36 3.540791242915098E-4 0.0 0.0 26.652420883232672 0.0 37 3.540791242915098E-4 0.0 0.0 27.16707489039038 0.0 38 4.4259890536438724E-4 0.0 0.0 27.670221326008615 0.0 39 4.4259890536438724E-4 0.0 0.0 28.307298190390117 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 25 3.8907623E-5 45.000004 16 GTCCGAT 25 3.8907623E-5 45.000004 9 ACTCGAC 25 3.8907623E-5 45.000004 6 TACGTCC 25 3.8907623E-5 45.000004 33 TATCCGT 30 2.1654687E-6 45.000004 14 TACGATG 20 7.0332363E-4 45.0 1 ATACGAT 20 7.0332363E-4 45.0 11 GTACGAG 80 0.0 45.0 1 TTGACCC 5000 0.0 44.054996 8 CTCAACT 5680 0.0 43.930454 2 TGCATTA 4410 0.0 43.82653 15 TCAACTT 5595 0.0 43.75335 3 GCATTAG 4470 0.0 43.640938 16 CATTAGA 4415 0.0 43.62401 17 CTTGACC 5600 0.0 43.433037 7 ACTTGAC 5600 0.0 43.39286 6 CTGCATT 4470 0.0 43.338924 14 AACTTGA 5610 0.0 43.19519 5 ATTAGAA 4425 0.0 43.169487 18 TGACCCT 4580 0.0 43.13319 9 >>END_MODULE